RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PML39	YML107C	POS5	Q06892	414 aa		4.21	□□□□□ -1.74
PML39	YML107C	GSH2	Q08220	491 aa		4.21	□□□□□ -1.74
PML39	YML107C	YOR111W	Q99210	232 aa		4.21	□□□□□ -1.74
PML39	YML107C	CHO1	P08456	276 aa		4.2	□□□□□ -1.74
PML39	YML107C	CDC24	P11433	854 aa	Predicted RBP	4.2	□□□□□ -1.74
PML39	YML107C	SPE2	P21182	396 aa		4.2	□□□□□ -1.74
PML39	YML107C	STV1	P37296	890 aa		4.2	□□□□□ -1.74
PML39	YML107C	BUR6	P40096	142 aa		4.2	□□□□□ -1.74
PML39	YML107C	AAD10	P47182	288 aa		4.2	□□□□□ -1.74
PML39	YML107C	MEP3	P53390	489 aa		4.2	□□□□□ -1.74
PML39	YML107C	YNR061C	P53747	219 aa		4.2	□□□□□ -1.74
PML39	YML107C	BOP3	P53958	396 aa		4.2	□□□□□ -1.74
PML39	YML107C	MCP2	Q06567	569 aa		4.2	□□□□□ -1.74
PML39	YML107C	PSR1	Q07800	427 aa		4.2	□□□□□ -1.74
PML39	YML107C	STE50	P25344	346 aa		4.19	□□□□□ -1.74
PML39	YML107C	CHS3	P29465	1165 aa		4.19	□□□□□ -1.74
PML39	YML107C	RFC1	P38630	861 aa	Known RBP	4.19	□□□□□ -1.74
PML39	YML107C	DPH1	P40487	425 aa	Known RBP	4.19	□□□□□ -1.74
PML39	YML107C	PKP1	P40530	394 aa		4.19	□□□□□ -1.74
PML39	YML107C	SMC3	P47037	1230 aa		4.19	□□□□□ -1.74
PML39	YML107C	YNL234W	P53857	426 aa		4.19	□□□□□ -1.74
PML39	YML107C	EAF7	P53911	425 aa	Known RBP	4.19	□□□□□ -1.74
PML39	YML107C	ENT4	Q07872	247 aa		4.19	□□□□□ -1.74
PML39	YML107C	TCO89	Q08921	799 aa		4.19	□□□□□ -1.74
PML39	YML107C	APL4	Q12028	832 aa		4.19	□□□□□ -1.74
PML39	YML107C	YLR112W	Q12130	139 aa		4.19	□□□□□ -1.74
PML39	YML107C	UBX3	Q12229	455 aa		4.19	□□□□□ -1.74
PML39	YML107C	ENT1	Q12518	454 aa		4.19	□□□□□ -1.74
PML39	YML107C	KRS1	P15180	591 aa	Known RBP	4.18	□□□□□ -1.74
PML39	YML107C	LCB1	P25045	558 aa	Known RBP	4.18	□□□□□ -1.74
PML39	YML107C	YCP4	P25349	247 aa	Known RBP	4.18	□□□□□ -1.74
PML39	YML107C	GND1	P38720	489 aa	Known RBP	4.18	□□□□□ -1.74
PML39	YML107C	RTS1	P38903	757 aa		4.18	□□□□□ -1.74
PML39	YML107C	ARC1	P46672	376 aa	Known RBP	4.18	□□□□□ -1.74
PML39	YML107C	PIL1	P53252	339 aa	Known RBP	4.18	□□□□□ -1.74
PML39	YML107C	ASI1	P54074	624 aa		4.18	□□□□□ -1.74
PML39	YML107C	IZH1	Q03419	316 aa		4.18	□□□□□ -1.74
PML39	YML107C	RAD30	Q04049	632 aa		4.18	□□□□□ -1.74
PML39	YML107C	CAC2	Q04199	468 aa		4.18	□□□□□ -1.74
PML39	YML107C	UTP21	Q06078	939 aa	Predicted RBP	4.18	□□□□□ -1.74
PML39	YML107C	INP53	Q12271	1107 aa		4.18	□□□□□ -1.74
PML39	YML107C	CBP1	P07252	654 aa		4.17	□□□□□ -1.74
PML39	YML107C	RPB8	P20436	146 aa		4.17	□□□□□ -1.74
PML39	YML107C	VMA16	P23968	213 aa		4.17	□□□□□ -1.74
PML39	YML107C	YKL050C	P35736	922 aa		4.17	□□□□□ -1.74
PML39	YML107C	YBL029W	P38201	376 aa		4.17	□□□□□ -1.74
PML39	YML107C	YEL068C	P39977	110 aa		4.17	□□□□□ -1.74
PML39	YML107C	FMP10	P40098	244 aa		4.17	□□□□□ -1.74
PML39	YML107C	LYS14	P40971	790 aa		4.17	□□□□□ -1.74
PML39	YML107C	SIP4	P46954	829 aa		4.17	□□□□□ -1.74
PML39	YML107C	LYS20	P48570	428 aa	Known RBP	4.17	□□□□□ -1.74
PML39	YML107C	SGF73	P53165	657 aa		4.17	□□□□□ -1.74
PML39	YML107C	YTP1	P53584	459 aa		4.17	□□□□□ -1.74
PML39	YML107C	ZDS2	P54786	942 aa		4.17	□□□□□ -1.74
PML39	YML107C	YMR178W	Q03219	274 aa	Known RBP	4.17	□□□□□ -1.74
PML39	YML107C	ARP10	Q04549	284 aa		4.17	□□□□□ -1.74
PML39	YML107C	ECI1	Q05871	280 aa		4.17	□□□□□ -1.74
PML39	YML107C	VIP1	Q06685	1146 aa	Known RBP	4.17	□□□□□ -1.74
PML39	YML107C	SNA4	Q07549	140 aa		4.17	□□□□□ -1.74
PML39	YML107C	RIX7	Q07844	837 aa	Known RBP	4.17	□□□□□ -1.74
PML39	YML107C	DSE3	Q08729	430 aa		4.17	□□□□□ -1.74
PML39	YML107C	TOP1	P04786	769 aa		4.16	□□□□□ -1.74
PML39	YML107C	RPL42A	P0CX27	106 aa	Known RBP	4.16	□□□□□ -1.74
PML39	YML107C	RPL42B	P0CX28	106 aa	Known RBP	4.16	□□□□□ -1.74
PML39	YML107C	GFD2	P25370	566 aa	Known RBP	4.16	□□□□□ -1.74
PML39	YML107C	AGP2	P38090	596 aa		4.16	□□□□□ -1.74
PML39	YML107C	UIP3	P39547	235 aa		4.16	□□□□□ -1.74
PML39	YML107C	RPS7B	P48164	190 aa	Known RBP	4.16	□□□□□ -1.74
PML39	YML107C	DIA3	P52290	468 aa		4.16	□□□□□ -1.74
PML39	YML107C	INN1	P53901	409 aa		4.16	□□□□□ -1.74
PML39	YML107C	HUA2	Q12134	243 aa		4.16	□□□□□ -1.74
PML39	YML107C	CLB2	P24869	491 aa		4.15	□□□□□ -1.75
PML39	YML107C	PDB1	P32473	366 aa	Known RBP	4.15	□□□□□ -1.75
PML39	YML107C	ATO2	P32907	282 aa		4.15	□□□□□ -1.75
PML39	YML107C	MAL33	P38157	468 aa		4.15	□□□□□ -1.75
PML39	YML107C	DIA4	P38705	446 aa	Predicted RBP	4.15	□□□□□ -1.75
PML39	YML107C	AFG3	P39925	761 aa		4.15	□□□□□ -1.75
PML39	YML107C	TMA108	P40462	946 aa		4.15	□□□□□ -1.75
PML39	YML107C	INA17	Q02888	182 aa		4.15	□□□□□ -1.75
PML39	YML107C	CTL1	Q03220	320 aa	Known RBP	4.15	□□□□□ -1.75
PML39	YML107C	CDC16	P09798	840 aa		4.14	□□□□□ -1.75
PML39	YML107C	MUD2	P36084	527 aa	Known RBP	4.14	□□□□□ -1.75
PML39	YML107C	YNG2	P38806	282 aa	Known RBP	4.14	□□□□□ -1.75
PML39	YML107C	IRC8	P47046	822 aa		4.14	□□□□□ -1.75
PML39	YML107C	YNL181W	P53878	407 aa		4.14	□□□□□ -1.75
PML39	YML107C	YSA1	Q01976	231 aa		4.14	□□□□□ -1.75
PML39	YML107C	YPL068C	Q02749	293 aa		4.14	□□□□□ -1.75
PML39	YML107C	ATG9	Q12142	997 aa		4.14	□□□□□ -1.75
PML39	YML107C	SNU114	P36048	1008 aa	Known RBP	4.13	□□□□□ -1.75
PML39	YML107C	MNN2	P38069	597 aa		4.13	□□□□□ -1.75
PML39	YML107C	YMR034C	Q05131	434 aa	Predicted RBP	4.13	□□□□□ -1.75
PML39	YML107C	YDL218W	Q07629	317 aa		4.13	□□□□□ -1.75
PML39	YML107C	MLH2	Q07980	695 aa		4.13	□□□□□ -1.75
PML39	YML107C	NKP1	Q12493	238 aa		4.13	□□□□□ -1.75
PML39	YML107C	YBR126W-A	Q8TGU7	68 aa		4.13	□□□□□ -1.75
PML39	YML107C	EDE1	P34216	1381 aa		4.13	□□□□□ -1.75
PML39	YML107C	PWP1	P21304	576 aa	Known RBP	4.12	□□□□□ -1.75
PML39	YML107C	ADH7	P25377	361 aa		4.12	□□□□□ -1.75
PML39	YML107C	MIA40	P36046	403 aa		4.12	□□□□□ -1.75
PML39	YML107C	AUR1	P36107	401 aa	Predicted RBP	4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms