RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W RTC1Q08281 1341 aa5.19□□□□□ -1.58
VPS36YLR417W ADE5,7P07244 802 aaKnown RBP5.19□□□□□ -1.58
VPS36YLR417W SRO77P38163 1010 aa5.19□□□□□ -1.58
VPS36YLR417W CCT6P39079 546 aa5.19□□□□□ -1.58
VPS36YLR417W UIP3P39547 235 aa5.19□□□□□ -1.58
VPS36YLR417W YEL057CP39983 233 aa5.19□□□□□ -1.58
VPS36YLR417W GPD2P41911 440 aaKnown RBP5.19□□□□□ -1.58
VPS36YLR417W DPB11P47027 764 aaPredicted RBP5.19□□□□□ -1.58
VPS36YLR417W LCL3P53153 274 aa5.19□□□□□ -1.58
VPS36YLR417W RTN2Q12443 393 aa5.19□□□□□ -1.58
VPS36YLR417W SEC3P33332 1336 aaKnown RBP5.18□□□□□ -1.58
VPS36YLR417W ARD1P07347 238 aaPredicted RBP5.18□□□□□ -1.58
VPS36YLR417W ADH7P25377 361 aa5.18□□□□□ -1.58
VPS36YLR417W GSH1P32477 678 aa5.18□□□□□ -1.58
VPS36YLR417W ADE17P38009 592 aaKnown RBP5.18□□□□□ -1.58
VPS36YLR417W MUM2P38236 366 aa5.18□□□□□ -1.58
VPS36YLR417W LSM5P40089 93 aaKnown RBP5.18□□□□□ -1.58
VPS36YLR417W YIL166CP40445 542 aa5.18□□□□□ -1.58
VPS36YLR417W PKP1P40530 394 aa5.18□□□□□ -1.58
VPS36YLR417W AXL1P40851 1208 aa5.18□□□□□ -1.58
VPS36YLR417W GRX6Q12438 231 aa5.18□□□□□ -1.58
VPS36YLR417W PAC2P39937 518 aa5.17□□□□□ -1.58
VPS36YLR417W SAE2P46946 345 aa5.17□□□□□ -1.58
VPS36YLR417W CTK2P46962 323 aa5.17□□□□□ -1.58
VPS36YLR417W APM1Q00776 475 aaPredicted RBP5.17□□□□□ -1.58
VPS36YLR417W YMR155WQ03795 547 aa5.17□□□□□ -1.58
VPS36YLR417W GET3Q12154 354 aaKnown RBP5.17□□□□□ -1.58
VPS36YLR417W MET18P40469 1032 aa5.17□□□□□ -1.58
VPS36YLR417W YJL043WP47053 257 aa5.17□□□□□ -1.58
VPS36YLR417W RPS7BP48164 190 aaKnown RBP5.17□□□□□ -1.58
VPS36YLR417W VID30P53076 958 aa5.17□□□□□ -1.58
VPS36YLR417W JJJ1P53863 590 aa5.17□□□□□ -1.58
VPS36YLR417W MDG1P53885 366 aa5.17□□□□□ -1.58
VPS36YLR417W BUD7Q08754 746 aa5.17□□□□□ -1.58
VPS36YLR417W INP53Q12271 1107 aa5.17□□□□□ -1.58
VPS36YLR417W BI2P03873 423 aa5.16□□□□□ -1.58
VPS36YLR417W PET111P08468 800 aa5.16□□□□□ -1.58
VPS36YLR417W AQY1P0CD91 305 aa5.16□□□□□ -1.58
VPS36YLR417W PDX1P16451 410 aa5.16□□□□□ -1.58
VPS36YLR417W RPC53P25441 422 aa5.16□□□□□ -1.58
VPS36YLR417W GSY2P27472 705 aa5.16□□□□□ -1.58
VPS36YLR417W VMA8P32610 256 aaKnown RBP5.16□□□□□ -1.58
VPS36YLR417W UBP11P36026 717 aa5.16□□□□□ -1.58
VPS36YLR417W SNU114P36048 1008 aaKnown RBP5.16□□□□□ -1.58
VPS36YLR417W SMC3P47037 1230 aa5.16□□□□□ -1.58
VPS36YLR417W DIA3P52290 468 aa5.16□□□□□ -1.58
VPS36YLR417W THI3Q07471 609 aa5.16□□□□□ -1.58
VPS36YLR417W LUC7Q07508 261 aaPredicted RBP5.16□□□□□ -1.58
VPS36YLR417W FMP40Q08968 688 aaPredicted RBP5.16□□□□□ -1.58
VPS36YLR417W RIM20Q12033 661 aa5.16□□□□□ -1.58
VPS36YLR417W MF(ALPHA)1P01149 165 aa5.15□□□□□ -1.58
VPS36YLR417W MRP2P10663 115 aaPredicted RBP5.15□□□□□ -1.58
VPS36YLR417W MAK32P23060 363 aa5.15□□□□□ -1.58
VPS36YLR417W SPO11P23179 398 aa5.15□□□□□ -1.58
VPS36YLR417W PXA2P34230 853 aa5.15□□□□□ -1.58
VPS36YLR417W MNN2P38069 597 aa5.15□□□□□ -1.58
VPS36YLR417W VID24P38263 362 aa5.15□□□□□ -1.58
VPS36YLR417W AFG3P39925 761 aa5.15□□□□□ -1.58
VPS36YLR417W IRC8P47046 822 aa5.15□□□□□ -1.58
VPS36YLR417W YGR250CP53316 781 aaKnown RBP5.15□□□□□ -1.58
VPS36YLR417W VPS38Q05919 439 aa5.15□□□□□ -1.58
VPS36YLR417W ATG9Q12142 997 aa5.15□□□□□ -1.58
VPS36YLR417W AVL9Q12500 764 aa5.15□□□□□ -1.58
VPS36YLR417W HOM3P10869 527 aa5.14□□□□□ -1.59
VPS36YLR417W SSE2P32590 693 aaKnown RBP5.14□□□□□ -1.59
VPS36YLR417W PEX5P35056 612 aa5.14□□□□□ -1.59
VPS36YLR417W SMF1P38925 575 aa5.14□□□□□ -1.59
VPS36YLR417W YFR020WP43600 232 aa5.14□□□□□ -1.59
VPS36YLR417W STU2P46675 888 aa5.14□□□□□ -1.59
VPS36YLR417W YPR003CP53394 754 aa5.14□□□□□ -1.59
VPS36YLR417W EFM6P53970 246 aa5.14□□□□□ -1.59
VPS36YLR417W MAK10Q02197 733 aa5.14□□□□□ -1.59
VPS36YLR417W ARO10Q06408 635 aa5.14□□□□□ -1.59
VPS36YLR417W YOR389WQ08912 624 aa5.14□□□□□ -1.59
VPS36YLR417W RDL1Q12305 139 aaKnown RBP5.14□□□□□ -1.59
VPS36YLR417W BLI1P35727 113 aa5.14□□□□□ -1.59
VPS36YLR417W CST26P38226 397 aa5.14□□□□□ -1.59
VPS36YLR417W APD1P38281 316 aa5.14□□□□□ -1.59
VPS36YLR417W FTH1P38310 465 aa5.14□□□□□ -1.59
VPS36YLR417W FAR3P46671 204 aa5.14□□□□□ -1.59
VPS36YLR417W YML6P51998 286 aa5.14□□□□□ -1.59
VPS36YLR417W RSC1P53236 928 aa5.14□□□□□ -1.59
VPS36YLR417W GRC3Q07845 632 aa5.14□□□□□ -1.59
VPS36YLR417W SPE2P21182 396 aa5.13□□□□□ -1.59
VPS36YLR417W DBF4P32325 704 aa5.13□□□□□ -1.59
VPS36YLR417W DOT5P40553 215 aa5.13□□□□□ -1.59
VPS36YLR417W SGN1P40561 250 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
VPS36YLR417W CDC1P40986 491 aa5.13□□□□□ -1.59
VPS36YLR417W BOP3P53958 396 aa5.13□□□□□ -1.59
VPS36YLR417W SLK19Q08581 821 aaKnown RBP5.13□□□□□ -1.59
VPS36YLR417W LEU9Q12166 604 aaKnown RBP5.13□□□□□ -1.59
VPS36YLR417W SUT2Q12286 268 aa5.13□□□□□ -1.59
VPS36YLR417W SNU66Q12420 587 aaPredicted RBP5.13□□□□□ -1.59
VPS36YLR417W EST1P17214 699 aaPredicted RBP5.12□□□□□ -1.59
VPS36YLR417W YBR144CP34215 104 aa5.12□□□□□ -1.59
VPS36YLR417W SEF1P34228 1148 aa5.12□□□□□ -1.59
VPS36YLR417W ELO1P39540 310 aa5.12□□□□□ -1.59
VPS36YLR417W QRI1P43123 477 aaKnown RBP5.12□□□□□ -1.59
VPS36YLR417W YGR127WP53275 312 aa5.12□□□□□ -1.59
VPS36YLR417W ZDS2P54786 942 aa5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms