RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C SDS22P36047 338 aa6.18□□□□□ -1.42
SKI2YLR398C SEA4P38164 1038 aa6.18□□□□□ -1.42
SKI2YLR398C CKB2P38930 258 aa6.18□□□□□ -1.42
SKI2YLR398C FHL1P39521 936 aa6.18□□□□□ -1.42
SKI2YLR398C CAK1P43568 368 aaPredicted RBP6.18□□□□□ -1.42
SKI2YLR398C LSM1P47017 172 aaKnown RBP6.18□□□□□ -1.42
SKI2YLR398C APS3P47064 194 aa6.18□□□□□ -1.42
SKI2YLR398C DAK1P54838 584 aaKnown RBP6.18□□□□□ -1.42
SKI2YLR398C MET31Q03081 177 aa6.18□□□□□ -1.42
SKI2YLR398C SMP3Q04174 516 aa6.18□□□□□ -1.42
SKI2YLR398C BSC2Q05611 235 aa6.18□□□□□ -1.42
SKI2YLR398C TEF1P02994 458 aaKnown RBP6.18□□□□□ -1.42
SKI2YLR398C DSF1P0CX08 502 aa6.18□□□□□ -1.42
SKI2YLR398C YNR073CP0CX09 502 aa6.18□□□□□ -1.42
SKI2YLR398C BUD31P25337 157 aaPredicted RBP6.18□□□□□ -1.42
SKI2YLR398C BDF1P35817 686 aa6.18□□□□□ -1.42
SKI2YLR398C MYO3P36006 1272 aa6.18□□□□□ -1.42
SKI2YLR398C ANR2P36090 516 aaPredicted RBP6.18□□□□□ -1.42
SKI2YLR398C DED81P38707 554 aaKnown RBP6.18□□□□□ -1.42
SKI2YLR398C YIL054WP40524 105 aa6.18□□□□□ -1.42
SKI2YLR398C THI12P42883 340 aa6.18□□□□□ -1.42
SKI2YLR398C THI5P43534 340 aa6.18□□□□□ -1.42
SKI2YLR398C COS4P43542 379 aa6.18□□□□□ -1.42
SKI2YLR398C THI11P47183 340 aa6.18□□□□□ -1.42
SKI2YLR398C RIM21P48565 533 aa6.18□□□□□ -1.42
SKI2YLR398C NMA111P53920 997 aa6.18□□□□□ -1.42
SKI2YLR398C NOP15P53927 220 aaPredicted RBP6.18□□□□□ -1.42
SKI2YLR398C YLR271WQ06152 274 aa6.18□□□□□ -1.42
SKI2YLR398C VPS74Q06385 345 aa6.18□□□□□ -1.42
SKI2YLR398C THI13Q07748 340 aa6.18□□□□□ -1.42
SKI2YLR398C AIM7Q12156 149 aa6.18□□□□□ -1.42
SKI2YLR398C TY3A-GQ12173 290 aa6.18□□□□□ -1.42
SKI2YLR398C HER1Q12276 1246 aa6.18□□□□□ -1.42
SKI2YLR398C RGS2Q99188 309 aa6.18□□□□□ -1.42
SKI2YLR398C TY3A-IQ99219 290 aa6.18□□□□□ -1.42
SKI2YLR398C YLR278CQ05854 1341 aa6.18□□□□□ -1.42
SKI2YLR398C COBP00163 385 aa6.18□□□□□ -1.42
SKI2YLR398C RPP1AP05318 106 aaPredicted RBP6.18□□□□□ -1.42
SKI2YLR398C ILV2P07342 687 aaKnown RBP6.18□□□□□ -1.42
SKI2YLR398C SGF29P25554 259 aa6.18□□□□□ -1.42
SKI2YLR398C PHA2P32452 334 aa6.18□□□□□ -1.42
SKI2YLR398C UTP30P36144 274 aaKnown RBP6.18□□□□□ -1.42
SKI2YLR398C YBL086CP38177 466 aa6.18□□□□□ -1.42
SKI2YLR398C APN2P38207 520 aa6.18□□□□□ -1.42
SKI2YLR398C OCA5P38738 679 aa6.18□□□□□ -1.42
SKI2YLR398C CHS6P40955 746 aa6.18□□□□□ -1.42
SKI2YLR398C MOG1P47123 218 aa6.18□□□□□ -1.42
SKI2YLR398C YMR160WQ03823 816 aa6.18□□□□□ -1.42
SKI2YLR398C TRM12Q04235 462 aa6.18□□□□□ -1.42
SKI2YLR398C SYT1Q06836 1226 aa6.18□□□□□ -1.42
SKI2YLR398C MED4Q12343 284 aa6.18□□□□□ -1.42
SKI2YLR398C CYB2P00175 591 aa6.17□□□□□ -1.42
SKI2YLR398C SFP1P32432 683 aa6.17□□□□□ -1.42
SKI2YLR398C YHR131CP38835 850 aa6.17□□□□□ -1.42
SKI2YLR398C AST2P39945 430 aaKnown RBP6.17□□□□□ -1.42
SKI2YLR398C SAM37P50110 327 aa6.17□□□□□ -1.42
SKI2YLR398C ENT5Q03769 411 aaKnown RBP6.17□□□□□ -1.42
SKI2YLR398C TAF11Q04226 346 aa6.17□□□□□ -1.42
SKI2YLR398C GPH1P06738 902 aaKnown RBP6.17□□□□□ -1.42
SKI2YLR398C RAP1P11938 827 aa6.17□□□□□ -1.42
SKI2YLR398C KSS1P14681 368 aa6.17□□□□□ -1.42
SKI2YLR398C MRPL17P36528 281 aa6.17□□□□□ -1.42
SKI2YLR398C ATP3P38077 311 aaKnown RBP6.17□□□□□ -1.42
SKI2YLR398C MAK5P38112 773 aaPredicted RBP6.17□□□□□ -1.42
SKI2YLR398C DUN1P39009 513 aa6.17□□□□□ -1.42
SKI2YLR398C SOK1P40317 901 aa6.17□□□□□ -1.42
SKI2YLR398C SER33P40510 469 aa6.17□□□□□ -1.42
SKI2YLR398C EFR3Q03653 782 aaKnown RBP6.17□□□□□ -1.42
SKI2YLR398C MEU1Q07938 337 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
SKI2YLR398C YNG1Q08465 219 aa6.17□□□□□ -1.42
SKI2YLR398C PHM8P40025 321 aa6.17□□□□□ -1.42
SKI2YLR398C YFH7P43591 353 aa6.17□□□□□ -1.42
SKI2YLR398C AVT1P47082 602 aa6.17□□□□□ -1.42
SKI2YLR398C NOP19P53317 196 aaPredicted RBP6.17□□□□□ -1.42
SKI2YLR398C FAR11P53917 953 aa6.17□□□□□ -1.42
SKI2YLR398C SED5Q01590 340 aa6.17□□□□□ -1.42
SKI2YLR398C FOX2Q02207 900 aaKnown RBP6.17□□□□□ -1.42
SKI2YLR398C RGC1Q06108 1083 aaKnown RBP6.17□□□□□ -1.42
SKI2YLR398C DSE3Q08729 430 aa6.17□□□□□ -1.42
SKI2YLR398C TAF3Q12297 353 aa6.17□□□□□ -1.42
SKI2YLR398C RPN6Q12377 434 aa6.17□□□□□ -1.42
SKI2YLR398C GRX6Q12438 231 aa6.17□□□□□ -1.42
SKI2YLR398C BCS1P32839 456 aa6.16□□□□□ -1.42
SKI2YLR398C URA8P38627 578 aaPredicted RBP6.16□□□□□ -1.42
SKI2YLR398C DOT6P40059 670 aaKnown RBP6.16□□□□□ -1.42
SKI2YLR398C TMN3P40071 706 aa6.16□□□□□ -1.42
SKI2YLR398C YIL077CP40508 320 aa6.16□□□□□ -1.42
SKI2YLR398C YJR054WP47114 497 aa6.16□□□□□ -1.42
SKI2YLR398C TIM13P53299 105 aa6.16□□□□□ -1.42
SKI2YLR398C SLI1P53304 468 aa6.16□□□□□ -1.42
SKI2YLR398C SWP1Q02795 286 aa6.16□□□□□ -1.42
SKI2YLR398C ARX1Q03862 593 aaKnown RBP6.16□□□□□ -1.42
SKI2YLR398C FCF2Q12035 217 aaPredicted RBP6.16□□□□□ -1.42
SKI2YLR398C YDR018CQ12185 396 aa6.16□□□□□ -1.42
SKI2YLR398C ENT1Q12518 454 aa6.16□□□□□ -1.42
SKI2YLR398C YGL194C-AQ2V2P6 80 aa6.16□□□□□ -1.42
SKI2YLR398C SUS1Q6WNK7 96 aa6.16□□□□□ -1.42
SKI2YLR398C CAP2P13517 287 aa6.16□□□□□ -1.42
SKI2YLR398C RAM1P22007 431 aa6.16□□□□□ -1.42
SKI2YLR398C WHI3P34761 661 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms