RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C YFR016CP43597 1233 aaKnown RBP2.29□□□□□ -2.04
RPL40BYKR094C CTK2P46962 323 aa2.29□□□□□ -2.04
RPL40BYKR094C IKS1P47042 667 aa2.29□□□□□ -2.04
RPL40BYKR094C PKP2P53170 491 aa2.29□□□□□ -2.04
RPL40BYKR094C CEG1Q01159 459 aaPredicted RBP2.29□□□□□ -2.04
RPL40BYKR094C ARP7Q12406 477 aa2.29□□□□□ -2.04
RPL40BYKR094C SET6Q12529 373 aa2.29□□□□□ -2.04
RPL40BYKR094C SWI4P25302 1093 aaKnown RBP2.28□□□□□ -2.04
RPL40BYKR094C SPC34P36131 295 aa2.28□□□□□ -2.04
RPL40BYKR094C YEN1P40028 759 aa2.28□□□□□ -2.04
RPL40BYKR094C COS10P52924 374 aa2.28□□□□□ -2.04
RPL40BYKR094C TDA7P53882 636 aaPredicted RBP2.28□□□□□ -2.04
RPL40BYKR094C FMP45Q07651 309 aa2.28□□□□□ -2.04
RPL40BYKR094C KRS1P15180 591 aaKnown RBP2.27□□□□□ -2.05
RPL40BYKR094C GCD7P32502 381 aaPredicted RBP2.27□□□□□ -2.05
RPL40BYKR094C TIF5P38431 405 aaKnown RBP2.27□□□□□ -2.05
RPL40BYKR094C PHO90P39535 881 aa2.27□□□□□ -2.05
RPL40BYKR094C RPR2P40571 144 aa2.27□□□□□ -2.05
RPL40BYKR094C PEX14P53112 341 aa2.27□□□□□ -2.05
RPL40BYKR094C RBA50Q04418 439 aa2.27□□□□□ -2.05
RPL40BYKR094C YOL159CQ08300 171 aa2.27□□□□□ -2.05
RPL40BYKR094C POL3P15436 1097 aa2.26□□□□□ -2.05
RPL40BYKR094C MCM4P30665 933 aaKnown RBP2.26□□□□□ -2.05
RPL40BYKR094C ARP2P32381 391 aaKnown RBP2.26□□□□□ -2.05
RPL40BYKR094C HXT1P32465 570 aa2.26□□□□□ -2.05
RPL40BYKR094C YEL045CP32616 141 aa2.26□□□□□ -2.05
RPL40BYKR094C PHD1P36093 366 aa2.26□□□□□ -2.05
RPL40BYKR094C RRP3P38712 501 aaKnown RBP2.26□□□□□ -2.05
RPL40BYKR094C MRX1P40050 688 aa2.26□□□□□ -2.05
RPL40BYKR094C RTT101P47050 842 aa2.26□□□□□ -2.05
RPL40BYKR094C RPM2Q02773 1202 aa2.26□□□□□ -2.05
RPL40BYKR094C ACH1P32316 526 aa2.25□□□□□ -2.05
RPL40BYKR094C SOF1P33750 489 aaKnown RBP2.25□□□□□ -2.05
RPL40BYKR094C SMK1P41808 388 aa2.25□□□□□ -2.05
RPL40BYKR094C MSS11Q03825 758 aa2.25□□□□□ -2.05
RPL40BYKR094C YEH2Q07950 538 aa2.25□□□□□ -2.05
RPL40BYKR094C SWT1Q12104 458 aa2.25□□□□□ -2.05
RPL40BYKR094C NDC1P32500 655 aa2.24□□□□□ -2.05
RPL40BYKR094C NTR2P36118 322 aaPredicted RBP2.24□□□□□ -2.05
RPL40BYKR094C GEX2P36173 615 aa2.24□□□□□ -2.05
RPL40BYKR094C YBP1P38315 674 aa2.24□□□□□ -2.05
RPL40BYKR094C ECM10P39987 644 aa2.24□□□□□ -2.05
RPL40BYKR094C ERR3P42222 437 aa2.24□□□□□ -2.05
RPL40BYKR094C YFR020WP43600 232 aa2.24□□□□□ -2.05
RPL40BYKR094C ERP1Q05359 219 aaKnown RBP2.24□□□□□ -2.05
RPL40BYKR094C CRN1Q06440 651 aa2.24□□□□□ -2.05
RPL40BYKR094C IWR1Q07532 353 aaPredicted RBP2.24□□□□□ -2.05
RPL40BYKR094C BIK1P11709 440 aa2.23□□□□□ -2.05
RPL40BYKR094C GAC1P28006 793 aa2.23□□□□□ -2.05
RPL40BYKR094C AAP1P37898 856 aaKnown RBP2.23□□□□□ -2.05
RPL40BYKR094C SWP82P43554 623 aa2.23□□□□□ -2.05
RPL40BYKR094C SRO77P38163 1010 aa2.22□□□□□ -2.05
RPL40BYKR094C IMA1P53051 589 aa2.22□□□□□ -2.05
RPL40BYKR094C RSM28Q03430 361 aa2.22□□□□□ -2.05
RPL40BYKR094C RDR1Q08904 546 aa2.22□□□□□ -2.05
RPL40BYKR094C SOD1P00445 154 aaKnown RBP2.21□□□□□ -2.06
RPL40BYKR094C MTF1P14908 341 aaKnown RBP2.21□□□□□ -2.06
RPL40BYKR094C MIA40P36046 403 aa2.21□□□□□ -2.06
RPL40BYKR094C YIL161WP40449 235 aaKnown RBP2.21□□□□□ -2.06
RPL40BYKR094C AXL1P40851 1208 aa2.21□□□□□ -2.06
RPL40BYKR094C IDP2P41939 412 aa2.21□□□□□ -2.06
RPL40BYKR094C SOL4P53315 255 aa2.21□□□□□ -2.06
RPL40BYKR094C EIS1Q05050 843 aaKnown RBP2.21□□□□□ -2.06
RPL40BYKR094C TMC1Q08422 150 aaPredicted RBP2.21□□□□□ -2.06
RPL40BYKR094C AYT1Q12226 474 aa2.21□□□□□ -2.06
RPL40BYKR094C PTR2P32901 601 aa2.2□□□□□ -2.06
RPL40BYKR094C MTC4P38335 694 aaKnown RBP2.2□□□□□ -2.06
RPL40BYKR094C ARP1P38696 384 aa2.2□□□□□ -2.06
RPL40BYKR094C PAL1Q05518 499 aaKnown RBP2.2□□□□□ -2.06
RPL40BYKR094C ADE13Q05911 482 aaKnown RBP2.2□□□□□ -2.06
RPL40BYKR094C GRC3Q07845 632 aa2.2□□□□□ -2.06
RPL40BYKR094C CDC45Q08032 650 aa2.2□□□□□ -2.06
RPL40BYKR094C YCL021W-AQ96VH3 125 aa2.2□□□□□ -2.06
RPL40BYKR094C HEM2P05373 342 aa2.19□□□□□ -2.06
RPL40BYKR094C TYR1P20049 452 aa2.19□□□□□ -2.06
RPL40BYKR094C SPC110P32380 944 aa2.19□□□□□ -2.06
RPL40BYKR094C NNF2P53253 936 aa2.19□□□□□ -2.06
RPL40BYKR094C ATG26Q06321 1198 aa2.19□□□□□ -2.06
RPL40BYKR094C VAM6Q07468 1049 aa2.19□□□□□ -2.06
RPL40BYKR094C YOL114CQ12322 202 aa2.19□□□□□ -2.06
RPL40BYKR094C PDH1Q12428 516 aaKnown RBP2.19□□□□□ -2.06
RPL40BYKR094C ARP6Q12509 438 aa2.19□□□□□ -2.06
RPL40BYKR094C MRC1P25588 1096 aa2.18□□□□□ -2.06
RPL40BYKR094C SIP2P34164 415 aaKnown RBP2.18□□□□□ -2.06
RPL40BYKR094C APM3P38153 483 aa2.18□□□□□ -2.06
RPL40BYKR094C FSH1P38777 243 aaKnown RBP2.18□□□□□ -2.06
RPL40BYKR094C RPN11P43588 306 aaKnown RBP2.18□□□□□ -2.06
RPL40BYKR094C TIS11P47977 285 aa2.18□□□□□ -2.06
RPL40BYKR094C MOT3P54785 490 aaKnown RBP2.18□□□□□ -2.06
RPL40BYKR094C YMR087WQ04299 284 aa2.18□□□□□ -2.06
RPL40BYKR094C RPL20AP0CX23 172 aaKnown RBP2.17□□□□□ -2.06
RPL40BYKR094C RPL20BP0CX24 172 aaPredicted RBP2.17□□□□□ -2.06
RPL40BYKR094C NAT1P12945 854 aaKnown RBP2.17□□□□□ -2.06
RPL40BYKR094C SPO16P17122 198 aa2.17□□□□□ -2.06
RPL40BYKR094C MSN2P33748 704 aa2.17□□□□□ -2.06
RPL40BYKR094C CTF18P49956 741 aa2.17□□□□□ -2.06
RPL40BYKR094C CPR6P53691 371 aaKnown RBP2.17□□□□□ -2.06
RPL40BYKR094C TEP1P53916 434 aa2.17□□□□□ -2.06
RPL40BYKR094C MHR1Q06630 226 aa2.17□□□□□ -2.06
RPL40BYKR094C YOL057WQ08225 711 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms