RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W RPS7BP48164 190 aaKnown RBP5.9□□□□□ -1.46
PRP40YKL012W IST1P53843 298 aaPredicted RBP5.9□□□□□ -1.46
PRP40YKL012W ECM22Q05958 814 aaPredicted RBP5.9□□□□□ -1.46
PRP40YKL012W RPL7BQ12213 244 aaKnown RBP5.9□□□□□ -1.46
PRP40YKL012W KIN3P22209 435 aa5.9□□□□□ -1.47
PRP40YKL012W CDC60P26637 1090 aaKnown RBP5.9□□□□□ -1.47
PRP40YKL012W GPI10P30777 616 aa5.9□□□□□ -1.47
PRP40YKL012W CST26P38226 397 aa5.9□□□□□ -1.47
PRP40YKL012W VID24P38263 362 aa5.9□□□□□ -1.47
PRP40YKL012W CHS7P38843 316 aa5.9□□□□□ -1.47
PRP40YKL012W ECM10P39987 644 aa5.9□□□□□ -1.47
PRP40YKL012W YJL068CP40363 299 aa5.9□□□□□ -1.47
PRP40YKL012W DOT5P40553 215 aa5.9□□□□□ -1.47
PRP40YKL012W VPS38Q05919 439 aa5.9□□□□□ -1.47
PRP40YKL012W LUC7Q07508 261 aaPredicted RBP5.9□□□□□ -1.47
PRP40YKL012W YMR084WA2P2R3 262 aa5.89□□□□□ -1.47
PRP40YKL012W ADH7P25377 361 aa5.89□□□□□ -1.47
PRP40YKL012W DMC1P25453 334 aa5.89□□□□□ -1.47
PRP40YKL012W PTC6P25646 442 aa5.89□□□□□ -1.47
PRP40YKL012W MNN2P38069 597 aa5.89□□□□□ -1.47
PRP40YKL012W MUP3P38734 546 aa5.89□□□□□ -1.47
PRP40YKL012W UIP3P39547 235 aa5.89□□□□□ -1.47
PRP40YKL012W AFG3P39925 761 aa5.89□□□□□ -1.47
PRP40YKL012W DPB11P47027 764 aaPredicted RBP5.89□□□□□ -1.47
PRP40YKL012W VID30P53076 958 aa5.89□□□□□ -1.47
PRP40YKL012W LEA1Q08963 238 aaPredicted RBP5.89□□□□□ -1.47
PRP40YKL012W FMP40Q08968 688 aaPredicted RBP5.89□□□□□ -1.47
PRP40YKL012W PUS9Q12069 462 aa5.89□□□□□ -1.47
PRP40YKL012W ILV2P07342 687 aaKnown RBP5.88□□□□□ -1.47
PRP40YKL012W STE12P13574 688 aa5.88□□□□□ -1.47
PRP40YKL012W AVL9Q12500 764 aa5.88□□□□□ -1.47
PRP40YKL012W EST1P17214 699 aaPredicted RBP5.88□□□□□ -1.47
PRP40YKL012W ADK2P26364 225 aa5.88□□□□□ -1.47
PRP40YKL012W LTP1P40347 161 aa5.88□□□□□ -1.47
PRP40YKL012W IRC8P47046 822 aa5.88□□□□□ -1.47
PRP40YKL012W DIA3P52290 468 aa5.88□□□□□ -1.47
PRP40YKL012W ERO1Q03103 563 aa5.88□□□□□ -1.47
PRP40YKL012W RMT2Q03305 412 aa5.88□□□□□ -1.47
PRP40YKL012W YLR345WQ06137 509 aa5.88□□□□□ -1.47
PRP40YKL012W ATG9Q12142 997 aa5.88□□□□□ -1.47
PRP40YKL012W INP53Q12271 1107 aa5.88□□□□□ -1.47
PRP40YKL012W ISA2Q12425 185 aa5.88□□□□□ -1.47
PRP40YKL012W CDC43P18898 376 aa5.87□□□□□ -1.47
PRP40YKL012W CLB3P24870 427 aa5.87□□□□□ -1.47
PRP40YKL012W GSH1P32477 678 aa5.87□□□□□ -1.47
PRP40YKL012W SAS3P34218 831 aa5.87□□□□□ -1.47
PRP40YKL012W ADE17P38009 592 aaKnown RBP5.87□□□□□ -1.47
PRP40YKL012W EXO1P39875 702 aa5.87□□□□□ -1.47
PRP40YKL012W PKP1P40530 394 aa5.87□□□□□ -1.47
PRP40YKL012W MAK10Q02197 733 aa5.87□□□□□ -1.47
PRP40YKL012W GIS1Q03833 894 aa5.87□□□□□ -1.47
PRP40YKL012W MRD1Q06106 887 aaKnown RBP5.87□□□□□ -1.47
PRP40YKL012W RAD34Q06665 692 aa5.87□□□□□ -1.47
PRP40YKL012W CYK3Q07533 885 aa5.87□□□□□ -1.47
PRP40YKL012W ATG29Q12092 213 aa5.87□□□□□ -1.47
PRP40YKL012W MF(ALPHA)1P01149 165 aa5.86□□□□□ -1.47
PRP40YKL012W GAL80P04387 435 aa5.86□□□□□ -1.47
PRP40YKL012W PET111P08468 800 aa5.86□□□□□ -1.47
PRP40YKL012W ILS1P09436 1072 aaKnown RBP5.86□□□□□ -1.47
PRP40YKL012W SSE2P32590 693 aaKnown RBP5.86□□□□□ -1.47
PRP40YKL012W SNU114P36048 1008 aaKnown RBP5.86□□□□□ -1.47
PRP40YKL012W APE4P38821 490 aa5.86□□□□□ -1.47
PRP40YKL012W MAF1P41910 395 aa5.86□□□□□ -1.47
PRP40YKL012W YFR020WP43600 232 aa5.86□□□□□ -1.47
PRP40YKL012W VPS73P53142 486 aaKnown RBP5.86□□□□□ -1.47
PRP40YKL012W NNF2P53253 936 aa5.86□□□□□ -1.47
PRP40YKL012W BOP3P53958 396 aa5.86□□□□□ -1.47
PRP40YKL012W EFM6P53970 246 aa5.86□□□□□ -1.47
PRP40YKL012W RTC1Q08281 1341 aa5.86□□□□□ -1.47
PRP40YKL012W SEC3P33332 1336 aaKnown RBP5.85□□□□□ -1.47
PRP40YKL012W ECM32P32644 1121 aaKnown RBP5.85□□□□□ -1.47
PRP40YKL012W WBP1P33767 430 aaKnown RBP5.85□□□□□ -1.47
PRP40YKL012W SEF1P34228 1148 aa5.85□□□□□ -1.47
PRP40YKL012W TCD2P36101 447 aaKnown RBP5.85□□□□□ -1.47
PRP40YKL012W YNL058CP53947 316 aa5.85□□□□□ -1.47
PRP40YKL012W MRH1Q12117 320 aaPredicted RBP5.85□□□□□ -1.47
PRP40YKL012W PET130P47065 347 aa5.85□□□□□ -1.47
PRP40YKL012W SGF73P53165 657 aa5.85□□□□□ -1.47
PRP40YKL012W TWF1P53250 332 aa5.85□□□□□ -1.47
PRP40YKL012W YDR239CQ03780 787 aa5.85□□□□□ -1.47
PRP40YKL012W RPC11Q04307 110 aaPredicted RBP5.85□□□□□ -1.47
PRP40YKL012W RQC1Q05468 723 aaKnown RBP5.85□□□□□ -1.47
PRP40YKL012W PMS1P14242 873 aa5.84□□□□□ -1.47
PRP40YKL012W KGD1P20967 1014 aaKnown RBP5.84□□□□□ -1.47
PRP40YKL012W SAT4P25333 603 aaKnown RBP5.84□□□□□ -1.47
PRP40YKL012W AAD3P25612 363 aa5.84□□□□□ -1.47
PRP40YKL012W EMP70P32802 667 aa5.84□□□□□ -1.47
PRP40YKL012W MRE11P32829 692 aa5.84□□□□□ -1.47
PRP40YKL012W UGP1P32861 499 aaKnown RBP5.84□□□□□ -1.47
PRP40YKL012W TIF3P34167 436 aaKnown RBP5.84□□□□□ -1.47
PRP40YKL012W GCS1P35197 352 aa5.84□□□□□ -1.47
PRP40YKL012W CMC1P36064 111 aa5.84□□□□□ -1.47
PRP40YKL012W OTU2P38747 307 aaKnown RBP5.84□□□□□ -1.47
PRP40YKL012W ALG5P40350 334 aa5.84□□□□□ -1.47
PRP40YKL012W SSU1P41930 458 aa5.84□□□□□ -1.47
PRP40YKL012W FAR3P46671 204 aa5.84□□□□□ -1.47
PRP40YKL012W VPS9P54787 451 aa5.84□□□□□ -1.47
PRP40YKL012W FIN1Q03898 291 aa5.84□□□□□ -1.47
PRP40YKL012W PDA1P16387 420 aaKnown RBP5.83□□□□□ -1.48
PRP40YKL012W SYN8P31377 255 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms