RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W HER2Q03557 464 aa5.5□□□□□ -1.53
CBF1YJR060W SXM1Q04175 944 aaKnown RBP5.5□□□□□ -1.53
CBF1YJR060W ECM38Q05902 660 aaPredicted RBP5.5□□□□□ -1.53
CBF1YJR060W YDL073WQ07454 984 aa5.5□□□□□ -1.53
CBF1YJR060W DDC1Q08949 612 aa5.5□□□□□ -1.53
CBF1YJR060W APL4Q12028 832 aa5.5□□□□□ -1.53
CBF1YJR060W VPS54Q12071 889 aa5.5□□□□□ -1.53
CBF1YJR060W HAL9Q12180 1030 aa5.5□□□□□ -1.53
CBF1YJR060W HXT1P32465 570 aa5.49□□□□□ -1.53
CBF1YJR060W PEX2P32800 271 aa5.49□□□□□ -1.53
CBF1YJR060W BLI1P35727 113 aa5.49□□□□□ -1.53
CBF1YJR060W OAF3P36023 863 aa5.49□□□□□ -1.53
CBF1YJR060W YBR056WP38081 501 aa5.49□□□□□ -1.53
CBF1YJR060W ECM13P38195 257 aa5.49□□□□□ -1.53
CBF1YJR060W HIS2P38635 335 aa5.49□□□□□ -1.53
CBF1YJR060W YHL041WP38730 149 aa5.49□□□□□ -1.53
CBF1YJR060W FHL1P39521 936 aa5.49□□□□□ -1.53
CBF1YJR060W GIP4P39732 760 aa5.49□□□□□ -1.53
CBF1YJR060W YEL075CP39972 122 aa5.49□□□□□ -1.53
CBF1YJR060W TMA108P40462 946 aa5.49□□□□□ -1.53
CBF1YJR060W SNZ3P43545 298 aa5.49□□□□□ -1.53
CBF1YJR060W MNN10P50108 393 aaKnown RBP5.49□□□□□ -1.53
CBF1YJR060W ZIP2P53061 704 aa5.49□□□□□ -1.53
CBF1YJR060W SNZ2P53824 298 aa5.49□□□□□ -1.53
CBF1YJR060W YNL247WP53852 767 aaKnown RBP5.49□□□□□ -1.53
CBF1YJR060W JJJ1P53863 590 aa5.49□□□□□ -1.53
CBF1YJR060W SSL1Q04673 461 aaPredicted RBP5.49□□□□□ -1.53
CBF1YJR060W YDR222WQ04925 415 aa5.49□□□□□ -1.53
CBF1YJR060W DIS3Q08162 1001 aaKnown RBP5.49□□□□□ -1.53
CBF1YJR060W AIM39Q08223 395 aa5.49□□□□□ -1.53
CBF1YJR060W THI21Q08975 551 aa5.49□□□□□ -1.53
CBF1YJR060W VPS5Q92331 675 aa5.49□□□□□ -1.53
CBF1YJR060W YLR149CQ99296 730 aa5.49□□□□□ -1.53
CBF1YJR060W RRP43P25359 394 aaPredicted RBP5.48□□□□□ -1.53
CBF1YJR060W PEX34P25584 144 aa5.48□□□□□ -1.53
CBF1YJR060W IMG2P25642 146 aaPredicted RBP5.48□□□□□ -1.53
CBF1YJR060W GYP6P32806 458 aa5.48□□□□□ -1.53
CBF1YJR060W SRB2P34162 210 aa5.48□□□□□ -1.53
CBF1YJR060W SHM2P37291 469 aaKnown RBP5.48□□□□□ -1.53
CBF1YJR060W KTR4P38131 464 aa5.48□□□□□ -1.53
CBF1YJR060W DUG2P38149 878 aa5.48□□□□□ -1.53
CBF1YJR060W LYS9P38999 446 aa5.48□□□□□ -1.53
CBF1YJR060W YMR124WP39523 943 aaKnown RBP5.48□□□□□ -1.53
CBF1YJR060W ERP2P39704 215 aa5.48□□□□□ -1.53
CBF1YJR060W NUP60P39705 539 aa5.48□□□□□ -1.53
CBF1YJR060W URM1P40554 99 aaPredicted RBP5.48□□□□□ -1.53
CBF1YJR060W PCL10P53124 433 aa5.48□□□□□ -1.53
CBF1YJR060W COP1P53622 1201 aaKnown RBP5.48□□□□□ -1.53
CBF1YJR060W SVL3Q03088 825 aaKnown RBP5.48□□□□□ -1.53
CBF1YJR060W TAF9Q05027 157 aa5.48□□□□□ -1.53
CBF1YJR060W HRD3Q05787 833 aa5.48□□□□□ -1.53
CBF1YJR060W ECM22Q05958 814 aaPredicted RBP5.48□□□□□ -1.53
CBF1YJR060W THI20Q08224 551 aa5.48□□□□□ -1.53
CBF1YJR060W SGO1Q08490 590 aa5.48□□□□□ -1.53
CBF1YJR060W RRD2Q12461 358 aa5.48□□□□□ -1.53
CBF1YJR060W BI2P03873 423 aa5.47□□□□□ -1.53
CBF1YJR060W ADE3P07245 946 aaKnown RBP5.47□□□□□ -1.53
CBF1YJR060W YPK1P12688 680 aaKnown RBP5.47□□□□□ -1.53
CBF1YJR060W EST1P17214 699 aaPredicted RBP5.47□□□□□ -1.53
CBF1YJR060W CKI1P20485 582 aa5.47□□□□□ -1.53
CBF1YJR060W STE11P23561 717 aa5.47□□□□□ -1.53
CBF1YJR060W RAD57P25301 460 aa5.47□□□□□ -1.53
CBF1YJR060W SED4P25365 1065 aa5.47□□□□□ -1.53
CBF1YJR060W YCR015CP25616 317 aa5.47□□□□□ -1.53
CBF1YJR060W CTS1P29029 562 aa5.47□□□□□ -1.53
CBF1YJR060W DBF4P32325 704 aa5.47□□□□□ -1.53
CBF1YJR060W SRB4P32569 687 aa5.47□□□□□ -1.53
CBF1YJR060W COY1P34237 679 aa5.47□□□□□ -1.53
CBF1YJR060W RCK2P38623 610 aa5.47□□□□□ -1.53
CBF1YJR060W TCD1P38756 429 aa5.47□□□□□ -1.53
CBF1YJR060W CAJ1P39101 391 aa5.47□□□□□ -1.53
CBF1YJR060W AVT2P39981 480 aa5.47□□□□□ -1.53
CBF1YJR060W CDC1P40986 491 aa5.47□□□□□ -1.53
CBF1YJR060W STU2P46675 888 aa5.47□□□□□ -1.53
CBF1YJR060W YJR079WP47126 109 aa5.47□□□□□ -1.53
CBF1YJR060W PEX31P53203 462 aa5.47□□□□□ -1.53
CBF1YJR060W AIM32Q04689 311 aa5.47□□□□□ -1.53
CBF1YJR060W SOV1Q04748 898 aa5.47□□□□□ -1.53
CBF1YJR060W IVY1Q04934 453 aa5.47□□□□□ -1.53
CBF1YJR060W AAD4Q07747 329 aa5.47□□□□□ -1.53
CBF1YJR060W UPC2Q12151 913 aa5.47□□□□□ -1.53
CBF1YJR060W NPC2Q12408 173 aa5.47□□□□□ -1.53
CBF1YJR060W KCS1Q12494 1050 aa5.47□□□□□ -1.53
CBF1YJR060W BI3Q9ZZW7 517 aa5.47□□□□□ -1.53
CBF1YJR060W APA1P16550 321 aaKnown RBP5.46□□□□□ -1.54
CBF1YJR060W KAR3P17119 729 aa5.46□□□□□ -1.54
CBF1YJR060W PHO81P17442 1178 aa5.46□□□□□ -1.54
CBF1YJR060W BET2P20133 325 aa5.46□□□□□ -1.54
CBF1YJR060W DBF20P32328 564 aa5.46□□□□□ -1.54
CBF1YJR060W FAT1P38225 669 aa5.46□□□□□ -1.54
CBF1YJR060W SIF2P38262 535 aa5.46□□□□□ -1.54
CBF1YJR060W YBR225WP38321 900 aa5.46□□□□□ -1.54
CBF1YJR060W SWC5P38326 303 aa5.46□□□□□ -1.54
CBF1YJR060W TMN3P40071 706 aa5.46□□□□□ -1.54
CBF1YJR060W EFM4P40516 257 aa5.46□□□□□ -1.54
CBF1YJR060W SAP185P40856 1058 aa5.46□□□□□ -1.54
CBF1YJR060W KAP114P53067 1004 aa5.46□□□□□ -1.54
CBF1YJR060W BTN2P53286 410 aa5.46□□□□□ -1.54
CBF1YJR060W TOF2Q02208 771 aa5.46□□□□□ -1.54
CBF1YJR060W BSP1Q06604 576 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms