RNA–Protein interactions for RNA: YIL017C

VID28, Transcript of GID Complex subunit, serves as adaptor for regulatory subunit Vid24p, yeast

Gene VID28, Length 2,766 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID28	YIL017C	CLD1	P53264	445 aa		4.1	□□□□□ -1.75
VID28	YIL017C	SOK2	P53438	785 aa	Predicted RBP	4.1	□□□□□ -1.75
VID28	YIL017C	CDC55	Q00362	526 aa		4.1	□□□□□ -1.75
VID28	YIL017C	MRPS16	Q02608	121 aa		4.1	□□□□□ -1.75
VID28	YIL017C	YPL068C	Q02749	293 aa		4.1	□□□□□ -1.75
VID28	YIL017C	UBP16	Q02863	499 aa		4.1	□□□□□ -1.75
VID28	YIL017C	NOG1	Q02892	647 aa	Known RBP	4.1	□□□□□ -1.75
VID28	YIL017C	EAF1	Q06337	982 aa		4.1	□□□□□ -1.75
VID28	YIL017C	ASA1	Q06822	443 aa		4.1	□□□□□ -1.75
VID28	YIL017C	PEX15	Q08215	383 aa		4.1	□□□□□ -1.75
VID28	YIL017C	YLR053C	Q12026	108 aa		4.1	□□□□□ -1.75
VID28	YIL017C	FAL1	Q12099	399 aa	Known RBP	4.1	□□□□□ -1.75
VID28	YIL017C	CCP1	P00431	361 aa		4.09	□□□□□ -1.75
VID28	YIL017C	MET6	P05694	767 aa	Known RBP	4.09	□□□□□ -1.75
VID28	YIL017C	YGL041W-A	P0C5N3	154 aa		4.09	□□□□□ -1.75
VID28	YIL017C	HSF1	P10961	833 aa		4.09	□□□□□ -1.75
VID28	YIL017C	OCA4	P25366	362 aa		4.09	□□□□□ -1.75
VID28	YIL017C	YCL049C	P25577	312 aa		4.09	□□□□□ -1.75
VID28	YIL017C	NTG1	P31378	399 aa		4.09	□□□□□ -1.75
VID28	YIL017C	APL2	P36000	726 aa	Predicted RBP	4.09	□□□□□ -1.75
VID28	YIL017C	MSR1	P38714	643 aa		4.09	□□□□□ -1.75
VID28	YIL017C	SBE22	P38814	852 aa		4.09	□□□□□ -1.75
VID28	YIL017C	DSS1	P39112	969 aa		4.09	□□□□□ -1.75
VID28	YIL017C	RCY1	P39531	840 aa		4.09	□□□□□ -1.75
VID28	YIL017C	SWD1	P39706	426 aa		4.09	□□□□□ -1.75
VID28	YIL017C	YMR134W	P40207	237 aa		4.09	□□□□□ -1.75
VID28	YIL017C	YJR061W	P40355	935 aa		4.09	□□□□□ -1.75
VID28	YIL017C	ALA1	P40825	983 aa	Known RBP	4.09	□□□□□ -1.75
VID28	YIL017C	IRC8	P47046	822 aa		4.09	□□□□□ -1.75
VID28	YIL017C	IMA1	P53051	589 aa		4.09	□□□□□ -1.75
VID28	YIL017C	GET1	P53192	235 aa		4.09	□□□□□ -1.75
VID28	YIL017C	YGR111W	P53265	400 aa		4.09	□□□□□ -1.75
VID28	YIL017C	YNL193W	P53870	558 aa		4.09	□□□□□ -1.75
VID28	YIL017C	RSC4	Q02206	625 aa		4.09	□□□□□ -1.75
VID28	YIL017C	YPS7	Q06325	596 aa		4.09	□□□□□ -1.75
VID28	YIL017C	COS7	Q07788	383 aa		4.09	□□□□□ -1.75
VID28	YIL017C	ACM1	Q08981	209 aa		4.09	□□□□□ -1.75
VID28	YIL017C	TRM10	Q12400	293 aa		4.09	□□□□□ -1.75
VID28	YIL017C	TDH1	P00360	332 aa	Known RBP	4.09	□□□□□ -1.75
VID28	YIL017C	PRI2	P20457	528 aa		4.09	□□□□□ -1.75
VID28	YIL017C	RVS161	P25343	265 aa	Known RBP	4.09	□□□□□ -1.75
VID28	YIL017C	DMC1	P25453	334 aa		4.09	□□□□□ -1.75
VID28	YIL017C	PET309	P32522	965 aa	Predicted RBP	4.09	□□□□□ -1.75
VID28	YIL017C	VAM7	P32912	316 aa		4.09	□□□□□ -1.75
VID28	YIL017C	PRP40	P33203	583 aa	Known RBP	4.09	□□□□□ -1.75
VID28	YIL017C	CCL1	P37366	393 aa		4.09	□□□□□ -1.75
VID28	YIL017C	NOP4	P37838	685 aa	Known RBP	4.09	□□□□□ -1.75
VID28	YIL017C	RIM2	P38127	377 aa		4.09	□□□□□ -1.75
VID28	YIL017C	HPM1	P40481	377 aa		4.09	□□□□□ -1.75
VID28	YIL017C	MNT3	P40549	630 aa		4.09	□□□□□ -1.75
VID28	YIL017C	YNL010W	P53981	241 aa	Known RBP	4.09	□□□□□ -1.75
VID28	YIL017C	EGD1	Q02642	157 aa	Known RBP	4.09	□□□□□ -1.75
VID28	YIL017C	TRM82	Q03774	444 aa		4.09	□□□□□ -1.75
VID28	YIL017C	TIF35	Q04067	274 aa	Known RBP	4.09	□□□□□ -1.75
VID28	YIL017C	UTP14	Q04500	899 aa	Known RBP	4.09	□□□□□ -1.75
VID28	YIL017C	ENT2	Q05785	613 aa		4.09	□□□□□ -1.75
VID28	YIL017C	FRE5	Q08908	694 aa		4.09	□□□□□ -1.75
VID28	YIL017C	TMA46	Q12000	345 aa	Known RBP	4.09	□□□□□ -1.75
VID28	YIL017C	SMF3	Q12078	473 aa	Predicted RBP	4.09	□□□□□ -1.75
VID28	YIL017C	MED1	Q12321	566 aa		4.09	□□□□□ -1.75
VID28	YIL017C	CMC2	Q3E7A4	109 aa		4.09	□□□□□ -1.75
VID28	YIL017C	RPS17A	P02407	136 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	CBP2	P03874	630 aa	Predicted RBP	4.08	□□□□□ -1.76
VID28	YIL017C	RPL25	P04456	142 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	RAD10	P06838	210 aa		4.08	□□□□□ -1.76
VID28	YIL017C	RPS17B	P14127	136 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	MAK31	P23059	88 aa		4.08	□□□□□ -1.76
VID28	YIL017C	URE2	P23202	354 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	GIT1	P25346	518 aa		4.08	□□□□□ -1.76
VID28	YIL017C	NUP2	P32499	720 aa		4.08	□□□□□ -1.76
VID28	YIL017C	MRS6	P32864	603 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	TFA2	P36145	328 aa		4.08	□□□□□ -1.76
VID28	YIL017C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
VID28	YIL017C	TDP1	P38319	544 aa		4.08	□□□□□ -1.76
VID28	YIL017C	OTU2	P38747	307 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	SOP4	P39543	234 aa	Predicted RBP	4.08	□□□□□ -1.76
VID28	YIL017C	SOK1	P40317	901 aa		4.08	□□□□□ -1.76
VID28	YIL017C	COG1	P53079	417 aa		4.08	□□□□□ -1.76
VID28	YIL017C	YGR067C	P53243	804 aa		4.08	□□□□□ -1.76
VID28	YIL017C	GTF1	P53260	183 aa	Predicted RBP	4.08	□□□□□ -1.76
VID28	YIL017C	YNL165W	P53891	406 aa		4.08	□□□□□ -1.76
VID28	YIL017C	PET117	Q02771	107 aa		4.08	□□□□□ -1.76
VID28	YIL017C	APC4	Q04601	652 aa		4.08	□□□□□ -1.76
VID28	YIL017C	SPO77	Q06134	477 aa		4.08	□□□□□ -1.76
VID28	YIL017C	AVO1	Q08236	1176 aa		4.08	□□□□□ -1.76
VID28	YIL017C	YNG1	Q08465	219 aa		4.08	□□□□□ -1.76
VID28	YIL017C	DIA2	Q08496	732 aa	Predicted RBP	4.08	□□□□□ -1.76
VID28	YIL017C	FEX2	Q08991	375 aa		4.08	□□□□□ -1.76
VID28	YIL017C	WTM2	Q12206	467 aa		4.08	□□□□□ -1.76
VID28	YIL017C	LDB17	Q12342	491 aa		4.08	□□□□□ -1.76
VID28	YIL017C	YOR131C	Q12486	218 aa		4.08	□□□□□ -1.76
VID28	YIL017C	RHO1	P06780	209 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	RAD18	P10862	487 aa		4.08	□□□□□ -1.76
VID28	YIL017C	RPL3	P14126	387 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	PRP22	P24384	1145 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	ERG6	P25087	383 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	ADP1	P25371	1049 aa		4.08	□□□□□ -1.76
VID28	YIL017C	KRR1	P25586	316 aa	Predicted RBP	4.08	□□□□□ -1.76
VID28	YIL017C	MSS1	P32559	526 aa	Predicted RBP	4.08	□□□□□ -1.76
VID28	YIL017C	ANP1	P32629	500 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms