RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMC1	YGL006W	YBR242W	P38331	238 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	GIP4	P39732	760 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	REF2	P42073	533 aa	Predicted RBP	4.22	□□□□□ -1.73
PMC1	YGL006W	REG1	Q00816	1014 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	CLU1	Q03690	1277 aa	Known RBP	4.22	□□□□□ -1.73
PMC1	YGL006W	ARP10	Q04549	284 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	PUS7	Q08647	676 aa	Known RBP	4.22	□□□□□ -1.73
PMC1	YGL006W	BAG7	Q12128	409 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	RRG1	Q12167	365 aa	Predicted RBP	4.22	□□□□□ -1.73
PMC1	YGL006W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
PMC1	YGL006W	YCK2	P23292	546 aa	Known RBP	4.22	□□□□□ -1.73
PMC1	YGL006W	PPZ1	P26570	692 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	BCK2	P33306	851 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	SET3	P36124	751 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	ASN1	P49089	572 aa	Known RBP	4.22	□□□□□ -1.73
PMC1	YGL006W	YNL115C	P53925	644 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	SKG3	Q06315	1026 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	PEX27	Q08580	376 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	RAX1	Q08760	435 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	DCP1	Q12517	231 aa	Predicted RBP	4.22	□□□□□ -1.73
PMC1	YGL006W	PRC1	P00729	532 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	TPK1	P06244	397 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	ERR1	P0CX10	437 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	ERR2	P0CX11	437 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	CDC42	P19073	191 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	CLN1	P20437	546 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	AMS1	P22855	1083 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	VMA6	P32366	345 aa	Known RBP	4.22	□□□□□ -1.73
PMC1	YGL006W	GDA1	P32621	518 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	GDH2	P33327	1092 aa	Known RBP	4.22	□□□□□ -1.73
PMC1	YGL006W	SDH3	P33421	198 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
PMC1	YGL006W	YBR259W	P38338	688 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	IPI1	P38803	334 aa	Predicted RBP	4.22	□□□□□ -1.73
PMC1	YGL006W	MTG2	P38860	518 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	FAD1	P38913	306 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	PMC1	P38929	1173 aa	Predicted RBP	4.22	□□□□□ -1.73
PMC1	YGL006W	ERR3	P42222	437 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	HXT16	P47185	567 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	ISM1	P48526	1002 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	ASN2	P49090	572 aa	Known RBP	4.22	□□□□□ -1.73
PMC1	YGL006W	GCV2	P49095	1034 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	YGR283C	P53336	341 aa	Predicted RBP	4.22	□□□□□ -1.73
PMC1	YGL006W	UBX3	Q12229	455 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	STE3	P06783	470 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	PUP3	P25451	205 aa	Known RBP	4.21	□□□□□ -1.73
PMC1	YGL006W	YKL063C	P35725	167 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	GLY1	P37303	387 aa	Known RBP	4.21	□□□□□ -1.73
PMC1	YGL006W	NOP4	P37838	685 aa	Known RBP	4.21	□□□□□ -1.73
PMC1	YGL006W	RDH54	P38086	958 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	HSL7	P38274	827 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	NMD3	P38861	518 aa	Known RBP	4.21	□□□□□ -1.73
PMC1	YGL006W	KRE29	P40026	464 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	TIR3	P40552	269 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	YFL066C	P43538	392 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	SAD1	P43589	448 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	BNA6	P43619	295 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	RMD8	P43620	662 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	ECL1	P48235	211 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	SLD3	P53135	668 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	TIM13	P53299	105 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	SLD5	Q03406	294 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	DBP9	Q06218	594 aa	Known RBP	4.21	□□□□□ -1.73
PMC1	YGL006W	GRS2	Q06817	618 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	ATG20	Q07528	640 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	WHI4	Q07655	649 aa	Known RBP	4.21	□□□□□ -1.73
PMC1	YGL006W	YDR061W	Q12298	539 aa		4.21	□□□□□ -1.73
PMC1	YGL006W	IMA3	P0CW40	589 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	IMA4	P0CW41	589 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	YAP1	P19880	650 aa	Known RBP	4.21	□□□□□ -1.74
PMC1	YGL006W	SGF29	P25554	259 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	TYE7	P33122	291 aa	Predicted RBP	4.21	□□□□□ -1.74
PMC1	YGL006W	APT2	P36973	181 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	YHI9	P38765	294 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	RBG1	P39729	369 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	NPP2	P39997	493 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	ALB1	P47019	175 aa	Predicted RBP	4.21	□□□□□ -1.74
PMC1	YGL006W	YJR054W	P47114	497 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	YJR098C	P47139	656 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	SAP4	P53036	818 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	YGL036W	P53185	909 aa	Predicted RBP	4.21	□□□□□ -1.74
PMC1	YGL006W	RSC4	Q02206	625 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	MLC2	Q06580	163 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	GSH2	Q08220	491 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	IMA2	Q08295	589 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	NSL1	Q12143	216 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	MDM32	Q12171	622 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	YLR126C	Q12288	251 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	EFG1	Q3E705	233 aa	Known RBP	4.21	□□□□□ -1.74
PMC1	YGL006W	SUC2	P00724	532 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	DED1	P06634	604 aa	Known RBP	4.21	□□□□□ -1.74
PMC1	YGL006W	ENA1	P13587	1091 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	APE1	P14904	514 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	COT1	P32798	439 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	YHR182W	P38870	785 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	GDI1	P39958	451 aa	Known RBP	4.21	□□□□□ -1.74
PMC1	YGL006W	FIR1	P40020	876 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	YER034W	P40022	185 aa	Known RBP	4.21	□□□□□ -1.74
PMC1	YGL006W	SER33	P40510	469 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	YNL181W	P53878	407 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms