RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W SAP185P40856 1058 aa1.07□□□□□ -2.24
BFR2YDR299W MSY1P48527 492 aa1.07□□□□□ -2.24
BFR2YDR299W IST1P53843 298 aaPredicted RBP1.07□□□□□ -2.24
BFR2YDR299W ASI1P54074 624 aa1.07□□□□□ -2.24
BFR2YDR299W TGL2P54857 326 aa1.07□□□□□ -2.24
BFR2YDR299W MRPL13Q02204 264 aa1.07□□□□□ -2.24
BFR2YDR299W TRS130Q03660 1102 aa1.07□□□□□ -2.24
BFR2YDR299W ARP10Q04549 284 aa1.07□□□□□ -2.24
BFR2YDR299W BLS1Q06071 122 aa1.07□□□□□ -2.24
BFR2YDR299W SWT1Q12104 458 aa1.07□□□□□ -2.24
BFR2YDR299W SSM4P40318 1319 aa1.07□□□□□ -2.24
BFR2YDR299W MSS18P08593 268 aa1.07□□□□□ -2.24
BFR2YDR299W MTF2P10849 440 aa1.07□□□□□ -2.24
BFR2YDR299W PCT1P13259 424 aa1.07□□□□□ -2.24
BFR2YDR299W PFK2P16862 959 aaKnown RBP RIP-Chip data1.07□□□□□ -2.24not detected
BFR2YDR299W RPB8P20436 146 aa1.07□□□□□ -2.24
BFR2YDR299W STE50P25344 346 aa1.07□□□□□ -2.24
BFR2YDR299W LSB5P25369 354 aa1.07□□□□□ -2.24
BFR2YDR299W YCL049CP25577 312 aa1.07□□□□□ -2.24
BFR2YDR299W RFA2P26754 273 aaKnown RBP1.07□□□□□ -2.24
BFR2YDR299W URK1P27515 501 aa1.07□□□□□ -2.24
BFR2YDR299W SOF1P33750 489 aaKnown RBP1.07□□□□□ -2.24
BFR2YDR299W LHS1P36016 881 aa1.07□□□□□ -2.24
BFR2YDR299W AAP1P37898 856 aaKnown RBP1.07□□□□□ -2.24
BFR2YDR299W ADE17P38009 592 aaKnown RBP1.07□□□□□ -2.24
BFR2YDR299W UBP13P38187 747 aa1.07□□□□□ -2.24
BFR2YDR299W RRT2P38332 387 aa1.07□□□□□ -2.24
BFR2YDR299W RRP3P38712 501 aaKnown RBP1.07□□□□□ -2.24
BFR2YDR299W IST3P40565 148 aaPredicted RBP1.07□□□□□ -2.24
BFR2YDR299W SPG5P42933 373 aa1.07□□□□□ -2.24
BFR2YDR299W FET5P43561 622 aa1.07□□□□□ -2.24
BFR2YDR299W SMC3P47037 1230 aa1.07□□□□□ -2.24
BFR2YDR299W MAD3P47074 515 aa1.07□□□□□ -2.24
BFR2YDR299W TAM41P53230 385 aa1.07□□□□□ -2.24
BFR2YDR299W CEG1Q01159 459 aaPredicted RBP1.07□□□□□ -2.24
BFR2YDR299W YMR178WQ03219 274 aaKnown RBP1.07□□□□□ -2.24
BFR2YDR299W VAM6Q07468 1049 aa1.07□□□□□ -2.24
BFR2YDR299W BSC6Q08280 497 aa1.07□□□□□ -2.24
BFR2YDR299W NUS1Q12063 375 aa1.07□□□□□ -2.24
BFR2YDR299W YLL056CQ12177 298 aa1.07□□□□□ -2.24
BFR2YDR299W MPD2Q99316 277 aa1.07□□□□□ -2.24
BFR2YDR299W TPK1P06244 397 aa1.06□□□□□ -2.24
BFR2YDR299W RAP1P11938 827 aa1.06□□□□□ -2.24
BFR2YDR299W SPE2P21182 396 aa1.06□□□□□ -2.24
BFR2YDR299W UBC1P21734 215 aaKnown RBP1.06□□□□□ -2.24
BFR2YDR299W TKL1P23254 680 aaKnown RBP1.06□□□□□ -2.24
BFR2YDR299W CLB4P24871 460 aa1.06□□□□□ -2.24
BFR2YDR299W TEF4P36008 412 aaKnown RBP1.06□□□□□ -2.24
BFR2YDR299W VPS24P36095 224 aaKnown RBP1.06□□□□□ -2.24
BFR2YDR299W MIC60P36112 540 aa1.06□□□□□ -2.24
BFR2YDR299W YHL041WP38730 149 aa1.06□□□□□ -2.24
BFR2YDR299W SEC31P38968 1273 aaKnown RBP1.06□□□□□ -2.24
BFR2YDR299W UIP3P39547 235 aa1.06□□□□□ -2.24
BFR2YDR299W PSF2P40359 213 aa1.06□□□□□ -2.24
BFR2YDR299W RIC1P40395 1056 aa1.06□□□□□ -2.24
BFR2YDR299W VPS4P52917 437 aa1.06□□□□□ -2.24
BFR2YDR299W BOR1P53838 576 aa1.06□□□□□ -2.24
BFR2YDR299W CSL4P53859 292 aaPredicted RBP1.06□□□□□ -2.24
BFR2YDR299W SWA2Q06677 668 aa1.06□□□□□ -2.24
BFR2YDR299W OPY2Q06810 360 aa1.06□□□□□ -2.24
BFR2YDR299W NKP1Q12493 238 aa1.06□□□□□ -2.24
BFR2YDR299W ATP2P00830 511 aaKnown RBP1.05□□□□□ -2.24
BFR2YDR299W HXK2P04807 486 aaKnown RBP1.05□□□□□ -2.24
BFR2YDR299W ADE3P07245 946 aaKnown RBP1.05□□□□□ -2.24
BFR2YDR299W GDH1P07262 454 aaKnown RBP1.05□□□□□ -2.24
BFR2YDR299W PRE8P23639 250 aa1.05□□□□□ -2.24
BFR2YDR299W GID7P25569 745 aa1.05□□□□□ -2.24
BFR2YDR299W ARP2P32381 391 aaKnown RBP1.05□□□□□ -2.24
BFR2YDR299W SRB5P32585 307 aa1.05□□□□□ -2.24
BFR2YDR299W CNS1P33313 385 aa1.05□□□□□ -2.24
BFR2YDR299W YKL050CP35736 922 aa1.05□□□□□ -2.24
BFR2YDR299W PSY4P38193 441 aa1.05□□□□□ -2.24
BFR2YDR299W ERG7P38604 731 aa1.05□□□□□ -2.24
BFR2YDR299W YNG2P38806 282 aaKnown RBP1.05□□□□□ -2.24
BFR2YDR299W SPC72P39723 622 aa1.05□□□□□ -2.24
BFR2YDR299W BUD16P39988 312 aa1.05□□□□□ -2.24
BFR2YDR299W PUG1P40100 303 aa1.05□□□□□ -2.24
BFR2YDR299W PKP1P40530 394 aa1.05□□□□□ -2.24
BFR2YDR299W SMK1P41808 388 aa1.05□□□□□ -2.24
BFR2YDR299W DIM1P41819 318 aaKnown RBP1.05□□□□□ -2.24
BFR2YDR299W YPI1P43587 155 aa1.05□□□□□ -2.24
BFR2YDR299W CTF18P49956 741 aa1.05□□□□□ -2.24
BFR2YDR299W ATG16Q03818 150 aa1.05□□□□□ -2.24
BFR2YDR299W RCO1Q04779 684 aa1.05□□□□□ -2.24
BFR2YDR299W YDL218WQ07629 317 aa1.05□□□□□ -2.24
BFR2YDR299W YOL057WQ08225 711 aa1.05□□□□□ -2.24
BFR2YDR299W CHO1P08456 276 aa1.04□□□□□ -2.24
BFR2YDR299W NUC1P08466 329 aa1.04□□□□□ -2.24
BFR2YDR299W TY2A-LR1P0C2J4 438 aa1.04□□□□□ -2.24
BFR2YDR299W TY2A-FP0CX61 438 aa1.04□□□□□ -2.24
BFR2YDR299W TY2A-GR2P0CX62 438 aa1.04□□□□□ -2.24
BFR2YDR299W TY2A-CP25383 438 aa1.04□□□□□ -2.24
BFR2YDR299W RPS2P25443 254 aaKnown RBP1.04□□□□□ -2.24
BFR2YDR299W RER1P25560 188 aa1.04□□□□□ -2.24
BFR2YDR299W GAC1P28006 793 aa1.04□□□□□ -2.24
BFR2YDR299W AGA1P32323 725 aa1.04□□□□□ -2.24
BFR2YDR299W SAC1P32368 623 aaKnown RBP1.04□□□□□ -2.24
BFR2YDR299W ERG1P32476 496 aaKnown RBP1.04□□□□□ -2.24
BFR2YDR299W YNK1P36010 153 aaKnown RBP1.04□□□□□ -2.24
BFR2YDR299W AGP2P38090 596 aa1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms