RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A NGL1Q08213 363 aaKnown RBP0.12□□□□□ -2.39
TFB5YDR079C-A SEC16P48415 2195 aaKnown RBP0.12□□□□□ -2.39
TFB5YDR079C-A SNT2P53127 1403 aa0.12□□□□□ -2.39
TFB5YDR079C-A MDS3P53094 1487 aa0.11□□□□□ -2.39
TFB5YDR079C-A CHO1P08456 276 aa0.11□□□□□ -2.39
TFB5YDR079C-A CDC60P26637 1090 aaKnown RBP0.11□□□□□ -2.39
TFB5YDR079C-A TIM23P32897 222 aa0.11□□□□□ -2.39
TFB5YDR079C-A YHR131CP38835 850 aa0.11□□□□□ -2.39
TFB5YDR079C-A CKB2P38930 258 aa0.11□□□□□ -2.39
TFB5YDR079C-A PHO90P39535 881 aa0.11□□□□□ -2.39
TFB5YDR079C-A FUN12P39730 1002 aaKnown RBP0.11□□□□□ -2.39
TFB5YDR079C-A YTA12P40341 825 aa0.11□□□□□ -2.39
TFB5YDR079C-A REE1P40893 198 aa0.11□□□□□ -2.39
TFB5YDR079C-A YDR034W-BQ6Q5X2 51 aa0.11□□□□□ -2.39
TFB5YDR079C-A CAT8P39113 1433 aa0.11□□□□□ -2.39
TFB5YDR079C-A HSL1P34244 1518 aa0.1□□□□□ -2.39
TFB5YDR079C-A PCT1P13259 424 aa0.1□□□□□ -2.39
TFB5YDR079C-A SIP2P34164 415 aaKnown RBP0.1□□□□□ -2.39
TFB5YDR079C-A MIA40P36046 403 aa0.1□□□□□ -2.39
TFB5YDR079C-A PMU1P36069 295 aa0.1□□□□□ -2.39
TFB5YDR079C-A MGS1P40151 587 aa0.1□□□□□ -2.39
TFB5YDR079C-A TMA108P40462 946 aa0.1□□□□□ -2.39
TFB5YDR079C-A YPS6P40583 537 aa0.1□□□□□ -2.39
TFB5YDR079C-A ART5P53244 586 aaKnown RBP0.1□□□□□ -2.39
TFB5YDR079C-A ZDS2P54786 942 aa0.1□□□□□ -2.39
TFB5YDR079C-A PTA1Q01329 785 aaPredicted RBP0.1□□□□□ -2.39
TFB5YDR079C-A PFA5Q03289 374 aa0.1□□□□□ -2.39
TFB5YDR079C-A RPC11Q04307 110 aaPredicted RBP0.1□□□□□ -2.39
TFB5YDR079C-A YDR109CQ04585 715 aa0.1□□□□□ -2.39
TFB5YDR079C-A ENT4Q07872 247 aa0.1□□□□□ -2.39
TFB5YDR079C-A TRE2Q08693 809 aa0.1□□□□□ -2.39
TFB5YDR079C-A WTM1Q12363 437 aaKnown RBP0.1□□□□□ -2.39
TFB5YDR079C-A SSN2P38931 1420 aa0.1□□□□□ -2.39
TFB5YDR079C-A MMS1Q06211 1407 aa0.1□□□□□ -2.39
TFB5YDR079C-A MON2P48563 1636 aaPredicted RBP0.09□□□□□ -2.39
TFB5YDR079C-A ATR1P13090 542 aa0.09□□□□□ -2.4
TFB5YDR079C-A CLB2P24869 491 aa0.09□□□□□ -2.4
TFB5YDR079C-A IRC5P43610 853 aa0.09□□□□□ -2.4
TFB5YDR079C-A VID30P53076 958 aa0.09□□□□□ -2.4
TFB5YDR079C-A YGR079WP53249 370 aa0.09□□□□□ -2.4
TFB5YDR079C-A YGR266WP53326 701 aa0.09□□□□□ -2.4
TFB5YDR079C-A YNL034WP53963 612 aa0.09□□□□□ -2.4
TFB5YDR079C-A CDC53Q12018 815 aaKnown RBP0.09□□□□□ -2.4
TFB5YDR079C-A LTE1P07866 1435 aa0.09□□□□□ -2.4
TFB5YDR079C-A SGS1P35187 1447 aa0.09□□□□□ -2.4
TFB5YDR079C-A DNF1P32660 1571 aa0.09□□□□□ -2.4
TFB5YDR079C-A ACC1Q00955 2233 aaKnown RBP0.09□□□□□ -2.4
TFB5YDR079C-A CSF1Q12150 2958 aa0.08□□□□□ -2.4
TFB5YDR079C-A ECM5Q03214 1411 aa0.08□□□□□ -2.4
TFB5YDR079C-A KRS1P15180 591 aaKnown RBP0.08□□□□□ -2.4
TFB5YDR079C-A TKL1P23254 680 aaKnown RBP0.08□□□□□ -2.4
TFB5YDR079C-A YCL049CP25577 312 aa0.08□□□□□ -2.4
TFB5YDR079C-A SRP68P38687 599 aaKnown RBP0.08□□□□□ -2.4
TFB5YDR079C-A YJR096WP47137 282 aa0.08□□□□□ -2.4
TFB5YDR079C-A TRS31Q03337 283 aa0.08□□□□□ -2.4
TFB5YDR079C-A HOS1Q12214 470 aa0.08□□□□□ -2.4
TFB5YDR079C-A YOR097CQ12274 175 aaPredicted RBP0.08□□□□□ -2.4
TFB5YDR079C-A PAN1P32521 1480 aa0.08□□□□□ -2.4
TFB5YDR079C-A KOG1P38873 1557 aa0.07□□□□□ -2.4
TFB5YDR079C-A IRC20Q06554 1556 aa0.07□□□□□ -2.4
TFB5YDR079C-A HIP1P06775 603 aa0.07□□□□□ -2.4
TFB5YDR079C-A TYR1P20049 452 aa0.07□□□□□ -2.4
TFB5YDR079C-A YCL042WP25572 119 aa0.07□□□□□ -2.4
TFB5YDR079C-A MCM4P30665 933 aaKnown RBP0.07□□□□□ -2.4
TFB5YDR079C-A CBF2P32504 956 aa0.07□□□□□ -2.4
TFB5YDR079C-A IME2P32581 645 aa0.07□□□□□ -2.4
TFB5YDR079C-A MSY1P48527 492 aa0.07□□□□□ -2.4
TFB5YDR079C-A NUP116Q02630 1113 aa0.07□□□□□ -2.4
TFB5YDR079C-A MFB1Q04922 465 aa0.07□□□□□ -2.4
TFB5YDR079C-A YOR378WQ08902 515 aa0.07□□□□□ -2.4
TFB5YDR079C-A YRA1Q12159 226 aaKnown RBP0.07□□□□□ -2.4
TFB5YDR079C-A INP53Q12271 1107 aa0.07□□□□□ -2.4
TFB5YDR079C-A AHC1Q12433 566 aa0.07□□□□□ -2.4
TFB5YDR079C-A NOP56Q12460 504 aaKnown RBP RIP-Chip data0.07□□□□□ -2.4not detected
TFB5YDR079C-A ARP6Q12509 438 aa0.07□□□□□ -2.4
TFB5YDR079C-A YLR278CQ05854 1341 aa0.07□□□□□ -2.4
TFB5YDR079C-A REV3P14284 1504 aa0.07□□□□□ -2.4
TFB5YDR079C-A YTA7P40340 1379 aa0.06□□□□□ -2.4
TFB5YDR079C-A RPO31P04051 1460 aa0.06□□□□□ -2.4
TFB5YDR079C-A RPL43AP0CX25 92 aaKnown RBP0.06□□□□□ -2.4
TFB5YDR079C-A RPL43BP0CX26 92 aa0.06□□□□□ -2.4
TFB5YDR079C-A RNA14P25298 677 aaKnown RBP0.06□□□□□ -2.4
TFB5YDR079C-A SEF1P34228 1148 aa0.06□□□□□ -2.4
TFB5YDR079C-A YIL067CP40514 678 aa0.06□□□□□ -2.4
TFB5YDR079C-A YFL040WP43562 540 aa0.06□□□□□ -2.4
TFB5YDR079C-A PKP2P53170 491 aa0.06□□□□□ -2.4
TFB5YDR079C-A YTP1P53584 459 aa0.06□□□□□ -2.4
TFB5YDR079C-A ADE16P54113 591 aaKnown RBP0.06□□□□□ -2.4
TFB5YDR079C-A RRN11Q04712 507 aa0.06□□□□□ -2.4
TFB5YDR079C-A SUL2Q12325 893 aa0.06□□□□□ -2.4
TFB5YDR079C-A PDR15Q04182 1529 aaKnown RBP0.06□□□□□ -2.4
TFB5YDR079C-A MYO2P19524 1574 aaKnown RBP0.06□□□□□ -2.4
TFB5YDR079C-A SMC4Q12267 1418 aa0.05□□□□□ -2.4
TFB5YDR079C-A POL1P13382 1468 aa0.05□□□□□ -2.4
TFB5YDR079C-A STI1P15705 589 aaKnown RBP RIP-Chip data0.05□□□□□ -2.4not detected
TFB5YDR079C-A ATP12P22135 325 aa0.05□□□□□ -2.4
TFB5YDR079C-A SAC1P32368 623 aaKnown RBP0.05□□□□□ -2.4
TFB5YDR079C-A PET309P32522 965 aaPredicted RBP0.05□□□□□ -2.4
TFB5YDR079C-A PIM1P36775 1133 aa0.05□□□□□ -2.4
TFB5YDR079C-A ADE17P38009 592 aaKnown RBP0.05□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms