RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C RPT6Q01939 405 aaKnown RBP1.6□□□□□ -2.15
UFD2YDL190C YML119WQ03208 357 aa1.6□□□□□ -2.15
UFD2YDL190C NGL3Q03210 505 aa1.6□□□□□ -2.15
UFD2YDL190C YDR179W-AQ03983 463 aa1.6□□□□□ -2.15
UFD2YDL190C SYF1Q04048 859 aaPredicted RBP1.6□□□□□ -2.15
UFD2YDL190C ARP9Q05123 467 aa1.6□□□□□ -2.15
UFD2YDL190C UTP21Q06078 939 aaPredicted RBP1.6□□□□□ -2.15
UFD2YDL190C YDL073WQ07454 984 aa1.6□□□□□ -2.15
UFD2YDL190C RIX7Q07844 837 aaKnown RBP1.6□□□□□ -2.15
UFD2YDL190C CIR2Q08822 631 aa1.6□□□□□ -2.15
UFD2YDL190C MRN1Q08925 612 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
UFD2YDL190C RRG1Q12167 365 aaPredicted RBP1.6□□□□□ -2.15
UFD2YDL190C AAC1P04710 309 aa1.59□□□□□ -2.15
UFD2YDL190C CKA1P15790 372 aa1.59□□□□□ -2.15
UFD2YDL190C SIP1P32578 815 aa1.59□□□□□ -2.15
UFD2YDL190C SRB5P32585 307 aa1.59□□□□□ -2.15
UFD2YDL190C MUP3P38734 546 aa1.59□□□□□ -2.15
UFD2YDL190C RTS1P38903 757 aa1.59□□□□□ -2.15
UFD2YDL190C FLC2P39719 783 aa1.59□□□□□ -2.15
UFD2YDL190C FUN12P39730 1002 aaKnown RBP1.59□□□□□ -2.15
UFD2YDL190C JHD1P40034 492 aa1.59□□□□□ -2.15
UFD2YDL190C MAM1P40065 302 aa1.59□□□□□ -2.15
UFD2YDL190C MRX6P48564 524 aa1.59□□□□□ -2.15
UFD2YDL190C SEC5P89102 971 aa1.59□□□□□ -2.15
UFD2YDL190C UBP16Q02863 499 aa1.59□□□□□ -2.15
UFD2YDL190C MUB1Q03162 620 aa1.59□□□□□ -2.15
UFD2YDL190C YML053CQ04978 212 aa1.59□□□□□ -2.15
UFD2YDL190C YDL242WQ07746 117 aa1.59□□□□□ -2.15
UFD2YDL190C CRT10Q08226 957 aa1.59□□□□□ -2.15
UFD2YDL190C LYS21Q12122 440 aaKnown RBP1.59□□□□□ -2.15
UFD2YDL190C NOP58Q12499 511 aaKnown RBP1.59□□□□□ -2.15
UFD2YDL190C CET1O13297 549 aaPredicted RBP1.59□□□□□ -2.16
UFD2YDL190C COX1P00401 534 aa1.59□□□□□ -2.16
UFD2YDL190C MET17P06106 444 aa1.59□□□□□ -2.16
UFD2YDL190C ERG11P10614 530 aa1.59□□□□□ -2.16
UFD2YDL190C RED1P14291 827 aa1.59□□□□□ -2.16
UFD2YDL190C KGD2P19262 463 aaPredicted RBP1.59□□□□□ -2.16
UFD2YDL190C NUP1P20676 1076 aa1.59□□□□□ -2.16
UFD2YDL190C RNR3P21672 869 aaKnown RBP1.59□□□□□ -2.16
UFD2YDL190C PEP3P27801 918 aa1.59□□□□□ -2.16
UFD2YDL190C GDA1P32621 518 aa1.59□□□□□ -2.16
UFD2YDL190C RPF2P36160 344 aaKnown RBP1.59□□□□□ -2.16
UFD2YDL190C MAL33P38157 468 aa1.59□□□□□ -2.16
UFD2YDL190C RKM3P38222 552 aa1.59□□□□□ -2.16
UFD2YDL190C ERC1P38767 581 aa1.59□□□□□ -2.16
UFD2YDL190C DJP1P40564 432 aa1.59□□□□□ -2.16
UFD2YDL190C IME4P41833 600 aa1.59□□□□□ -2.16
UFD2YDL190C CIR1P42940 261 aa1.59□□□□□ -2.16
UFD2YDL190C UBX6P47049 396 aa1.59□□□□□ -2.16
UFD2YDL190C NPA3P47122 385 aa1.59□□□□□ -2.16
UFD2YDL190C COQ6P53318 479 aa1.59□□□□□ -2.16
UFD2YDL190C YPL071CQ02864 156 aa1.59□□□□□ -2.16
UFD2YDL190C SPN1Q06505 410 aaPredicted RBP1.59□□□□□ -2.16
UFD2YDL190C CTI6Q08923 506 aa1.59□□□□□ -2.16
UFD2YDL190C RCN2Q12044 265 aa1.59□□□□□ -2.16
UFD2YDL190C NMD4Q12129 218 aa1.59□□□□□ -2.16
UFD2YDL190C ICT1Q12385 394 aa1.59□□□□□ -2.16
UFD2YDL190C MDM20Q12387 796 aaKnown RBP1.59□□□□□ -2.16
UFD2YDL190C ZPS1Q12512 249 aa1.59□□□□□ -2.16
UFD2YDL190C AI5_ALPHAQ9ZZX1 630 aa1.59□□□□□ -2.16
UFD2YDL190C TY3B-IQ7LHG5 1498 aaKnown RBP1.59□□□□□ -2.16
UFD2YDL190C YBR085C-AO43137 85 aa1.58□□□□□ -2.16
UFD2YDL190C CPA2P03965 1118 aaKnown RBP1.58□□□□□ -2.16
UFD2YDL190C CHO2P05374 869 aaKnown RBP1.58□□□□□ -2.16
UFD2YDL190C WHI2P12611 486 aa1.58□□□□□ -2.16
UFD2YDL190C KAR3P17119 729 aa1.58□□□□□ -2.16
UFD2YDL190C POL4P25615 582 aa1.58□□□□□ -2.16
UFD2YDL190C CDC15P27636 974 aa1.58□□□□□ -2.16
UFD2YDL190C PAC2P39937 518 aa1.58□□□□□ -2.16
UFD2YDL190C MIT1P40002 666 aa1.58□□□□□ -2.16
UFD2YDL190C LAS21P40367 830 aa1.58□□□□□ -2.16
UFD2YDL190C SEC24P40482 926 aaKnown RBP1.58□□□□□ -2.16
UFD2YDL190C RIM13Q03792 727 aa1.58□□□□□ -2.16
UFD2YDL190C SKG3Q06315 1026 aa1.58□□□□□ -2.16
UFD2YDL190C CRN1Q06440 651 aa1.58□□□□□ -2.16
UFD2YDL190C LCB4Q12246 624 aa1.58□□□□□ -2.16
UFD2YDL190C Q0010Q9ZZX9 128 aa1.58□□□□□ -2.16
UFD2YDL190C FKS3Q04952 1785 aa1.58□□□□□ -2.16
UFD2YDL190C PTP1P25044 335 aa1.58□□□□□ -2.16
UFD2YDL190C OCA4P25366 362 aa1.58□□□□□ -2.16
UFD2YDL190C VMA8P32610 256 aaKnown RBP1.58□□□□□ -2.16
UFD2YDL190C NPL6P32832 435 aa1.58□□□□□ -2.16
UFD2YDL190C HES1P35843 434 aa1.58□□□□□ -2.16
UFD2YDL190C YMC2P38087 329 aa1.58□□□□□ -2.16
UFD2YDL190C UTP9P38882 575 aaKnown RBP1.58□□□□□ -2.16
UFD2YDL190C SAP1P39955 897 aaKnown RBP1.58□□□□□ -2.16
UFD2YDL190C SPO22P40511 975 aa1.58□□□□□ -2.16
UFD2YDL190C GPD2P41911 440 aaKnown RBP1.58□□□□□ -2.16
UFD2YDL190C MSY1P48527 492 aa1.58□□□□□ -2.16
UFD2YDL190C YGL036WP53185 909 aaPredicted RBP1.58□□□□□ -2.16
UFD2YDL190C COG2P53271 262 aa1.58□□□□□ -2.16
UFD2YDL190C YDR109CQ04585 715 aa1.58□□□□□ -2.16
UFD2YDL190C GFD1Q04839 188 aaKnown RBP1.58□□□□□ -2.16
UFD2YDL190C SWA2Q06677 668 aa1.58□□□□□ -2.16
UFD2YDL190C GPN2Q08726 347 aaPredicted RBP1.58□□□□□ -2.16
UFD2YDL190C TCO89Q08921 799 aa1.58□□□□□ -2.16
UFD2YDL190C PCL8Q08966 492 aa1.58□□□□□ -2.16
UFD2YDL190C BAG7Q12128 409 aa1.58□□□□□ -2.16
UFD2YDL190C SNU66Q12420 587 aaPredicted RBP1.58□□□□□ -2.16
UFD2YDL190C NUP192P47054 1683 aa1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms