RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	PEX2	P32800	271 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	UGP1	P32861	499 aa	Known RBP	3.55	□□□□□ -1.84
CMD1	YBR109C	SLC1	P33333	303 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	BMH2	P34730	273 aa	Known RBP	3.55	□□□□□ -1.84
CMD1	YBR109C	ADE17	P38009	592 aa	Known RBP	3.55	□□□□□ -1.84
CMD1	YBR109C	EFM2	P38347	419 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	AXL2	P38928	823 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	BUD16	P39988	312 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	YIL166C	P40445	542 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	ZAP1	P47043	880 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	APT1	P49435	187 aa	Known RBP	3.55	□□□□□ -1.84
CMD1	YBR109C	PSP1	P50896	841 aa	Known RBP	3.55	□□□□□ -1.84
CMD1	YBR109C	WAR1	Q03631	944 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	RBA50	Q04418	439 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	YDL242W	Q07746	117 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	NEW1	Q08972	1196 aa	Known RBP	3.55	□□□□□ -1.84
CMD1	YBR109C	LCB4	Q12246	624 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	CYB2	P00175	591 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	TPK1	P06244	397 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	BMH1	P29311	267 aa	Known RBP	3.54	□□□□□ -1.84
CMD1	YBR109C	MRPL9	P31334	269 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	MCM10	P32354	571 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	SRB4	P32569	687 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	BYE1	P36106	594 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	MTG2	P38860	518 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	KAP123	P40069	1113 aa	Known RBP	3.54	□□□□□ -1.84
CMD1	YBR109C	LAS21	P40367	830 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	SKP2	P42843	763 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	IRC8	P47046	822 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	SGM1	P47166	707 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	MRK1	P50873	501 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	CUE3	P53137	624 aa	Known RBP	3.54	□□□□□ -1.84
CMD1	YBR109C	IMO32	P53219	342 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	YGR079W	P53249	370 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	MEP3	P53390	489 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	CSL4	P53859	292 aa	Predicted RBP	3.54	□□□□□ -1.84
CMD1	YBR109C	APM1	Q00776	475 aa	Predicted RBP	3.54	□□□□□ -1.84
CMD1	YBR109C	MRS2	Q01926	470 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	MTG1	Q03151	367 aa	Predicted RBP	3.54	□□□□□ -1.84
CMD1	YBR109C	RAD33	Q04231	177 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	GTB1	Q04924	702 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	YML053C	Q04978	212 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	VPS38	Q05919	439 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	STP3	Q05937	343 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	OPY2	Q06810	360 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	ULA1	Q12059	462 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	TIP41	Q12199	356 aa		3.54	□□□□□ -1.84
CMD1	YBR109C	RUD3	Q12234	484 aa	Known RBP	3.54	□□□□□ -1.84
CMD1	YBR109C	POM152	P39685	1337 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	ATP2	P00830	511 aa	Known RBP	3.53	□□□□□ -1.84
CMD1	YBR109C	TY2A-LR1	P0C2J4	438 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	TY2A-F	P0CX61	438 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	TY2A-GR2	P0CX62	438 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	RPA135	P22138	1203 aa	Known RBP	3.53	□□□□□ -1.84
CMD1	YBR109C	SPO11	P23179	398 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	RRP43	P25359	394 aa	Predicted RBP	3.53	□□□□□ -1.84
CMD1	YBR109C	TY2A-C	P25383	438 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	RER1	P25560	188 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	AAD3	P25612	363 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	ADY2	P25613	283 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	YJU2	P28320	278 aa	Predicted RBP	3.53	□□□□□ -1.84
CMD1	YBR109C	RPT3	P33298	428 aa	Known RBP	3.53	□□□□□ -1.84
CMD1	YBR109C	CNS1	P33313	385 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	TEF4	P36008	412 aa	Known RBP	3.53	□□□□□ -1.84
CMD1	YBR109C	GEX2	P36173	615 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	ERC1	P38767	581 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	RTT107	P38850	1070 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	UME6	P39001	836 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	CCT4	P39078	528 aa	Known RBP	3.53	□□□□□ -1.84
CMD1	YBR109C	PES4	P39684	611 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	PAC2	P39937	518 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	YER010C	P40011	234 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	COG1	P53079	417 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	COG2	P53271	262 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	TY2A-DR2	Q03483	438 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	HRD3	Q05787	833 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	MRI1	Q06489	411 aa	Known RBP	3.53	□□□□□ -1.84
CMD1	YBR109C	PLP2	Q12017	286 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	TY2A-B	Q12260	438 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	PRS5	Q12265	496 aa	Known RBP	3.53	□□□□□ -1.84
CMD1	YBR109C	TY2A-OR2	Q12293	438 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	TY2A-DR1	Q12392	438 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	TY2A-OR1	Q12439	438 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	AHA1	Q12449	350 aa	Known RBP	3.53	□□□□□ -1.84
CMD1	YBR109C	TY2A-DR3	Q99303	438 aa		3.53	□□□□□ -1.84
CMD1	YBR109C	YMR084W	A2P2R3	262 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	CDC37	P06101	506 aa	Known RBP	3.52	□□□□□ -1.85
CMD1	YBR109C	ADE5,7	P07244	802 aa	Known RBP	3.52	□□□□□ -1.85
CMD1	YBR109C	YML003W	P0CF16	290 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	PHO13	P19881	312 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	RPO26	P20435	155 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	MBR1	P23493	339 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	SAS3	P34218	831 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	NUP120	P35729	1037 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	RPF2	P36160	344 aa	Known RBP	3.52	□□□□□ -1.85
CMD1	YBR109C	KTR3	P38130	404 aa	Predicted RBP	3.52	□□□□□ -1.85
CMD1	YBR109C	SMC2	P38989	1170 aa	Known RBP	3.52	□□□□□ -1.85
CMD1	YBR109C	SAP1	P39955	897 aa	Known RBP	3.52	□□□□□ -1.85
CMD1	YBR109C	YMR147W	P40218	223 aa	Known RBP	3.52	□□□□□ -1.85
CMD1	YBR109C	OPT1	P40897	799 aa		3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms