RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32 RIP-Chip
LDB7YBL006C PET117Q02771 107 aa6.82□□□□□ -1.32
LDB7YBL006C CCE1Q03702 353 aa6.82□□□□□ -1.32
LDB7YBL006C ECI1Q05871 280 aa6.82□□□□□ -1.32
LDB7YBL006C NUT2Q06213 157 aa6.82□□□□□ -1.32
LDB7YBL006C ERF2Q06551 359 aa6.82□□□□□ -1.32
LDB7YBL006C CDC73Q06697 393 aa6.82□□□□□ -1.32
LDB7YBL006C HRK1Q08732 759 aaKnown RBP6.82□□□□□ -1.32
LDB7YBL006C SUL2Q12325 893 aa6.82□□□□□ -1.32
LDB7YBL006C AMD1P15274 810 aaKnown RBP6.81□□□□□ -1.32
LDB7YBL006C PRP9P19736 530 aaKnown RBP6.81□□□□□ -1.32
LDB7YBL006C YCL068CP25593 260 aa6.81□□□□□ -1.32
LDB7YBL006C SPT16P32558 1035 aaKnown RBP6.81□□□□□ -1.32
LDB7YBL006C CNS1P33313 385 aa6.81□□□□□ -1.32
LDB7YBL006C MAK5P38112 773 aaPredicted RBP6.81□□□□□ -1.32
LDB7YBL006C PBP2P38151 413 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
LDB7YBL006C UBS1P38290 277 aa6.81□□□□□ -1.32
LDB7YBL006C POP4P38336 279 aa6.81□□□□□ -1.32
LDB7YBL006C CAJ1P39101 391 aa6.81□□□□□ -1.32
LDB7YBL006C MEF2P39677 819 aa6.81□□□□□ -1.32
LDB7YBL006C YEL073CP39974 107 aa6.81□□□□□ -1.32
LDB7YBL006C LSM5P40089 93 aaKnown RBP6.81□□□□□ -1.32
LDB7YBL006C YJL107CP42947 387 aa6.81□□□□□ -1.32
LDB7YBL006C APT1P49435 187 aaKnown RBP6.81□□□□□ -1.32
LDB7YBL006C ZRG17P53735 605 aa6.81□□□□□ -1.32
LDB7YBL006C OSH6Q02201 448 aa6.81□□□□□ -1.32
LDB7YBL006C RPN9Q04062 393 aaKnown RBP6.81□□□□□ -1.32
LDB7YBL006C NHX1Q04121 633 aa6.81□□□□□ -1.32
LDB7YBL006C BLS1Q06071 122 aa6.81□□□□□ -1.32
LDB7YBL006C ZRT2Q12436 422 aa6.81□□□□□ -1.32
LDB7YBL006C YML002WP0CF17 737 aa6.8□□□□□ -1.32
LDB7YBL006C INO1P11986 533 aa6.8□□□□□ -1.32
LDB7YBL006C CDC20P26309 610 aa6.8□□□□□ -1.32
LDB7YBL006C GUT2P32191 649 aa6.8□□□□□ -1.32
LDB7YBL006C RTG1P32607 177 aa6.8□□□□□ -1.32
LDB7YBL006C NRP1P32770 719 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
LDB7YBL006C CDC13P32797 924 aaKnown RBP6.8□□□□□ -1.32
LDB7YBL006C STB6P36085 766 aa6.8□□□□□ -1.32
LDB7YBL006C YSW1P38280 609 aa6.8□□□□□ -1.32
LDB7YBL006C VHC1P38329 1120 aa6.8□□□□□ -1.32
LDB7YBL006C SMF1P38925 575 aa6.8□□□□□ -1.32
LDB7YBL006C PXA1P41909 870 aa6.8□□□□□ -1.32
LDB7YBL006C YFL012WP43580 148 aa6.8□□□□□ -1.32
LDB7YBL006C RTA1P53047 317 aa6.8□□□□□ -1.32
LDB7YBL006C HST3P53687 447 aa6.8□□□□□ -1.32
LDB7YBL006C ECM9Q02202 377 aa6.8□□□□□ -1.32
LDB7YBL006C ROT1Q03691 256 aa6.8□□□□□ -1.32
LDB7YBL006C SML1Q04964 104 aa6.8□□□□□ -1.32
LDB7YBL006C VTA1Q06263 330 aa6.8□□□□□ -1.32
LDB7YBL006C YOL073CQ08232 322 aa6.8□□□□□ -1.32
LDB7YBL006C MPC54Q08550 464 aa6.8□□□□□ -1.32
LDB7YBL006C YOR389WQ08912 624 aa6.8□□□□□ -1.32
LDB7YBL006C YPL278CQ08990 100 aa6.8□□□□□ -1.32
LDB7YBL006C YDR262WQ12331 272 aa6.8□□□□□ -1.32
LDB7YBL006C GTT2Q12390 233 aa6.8□□□□□ -1.32
LDB7YBL006C SEC39Q12745 709 aa6.8□□□□□ -1.32
LDB7YBL006C NHA1Q99271 985 aa6.8□□□□□ -1.32
LDB7YBL006C MSH1P25846 959 aa6.79□□□□□ -1.32
LDB7YBL006C MGT1P26188 188 aa6.79□□□□□ -1.32
LDB7YBL006C BEM1P29366 551 aa6.79□□□□□ -1.32
LDB7YBL006C MFT1P33441 392 aaKnown RBP6.79□□□□□ -1.32
LDB7YBL006C UBA4P38820 440 aa6.79□□□□□ -1.32
LDB7YBL006C ACO2P39533 789 aa6.79□□□□□ -1.32
LDB7YBL006C LRO1P40345 661 aa6.79□□□□□ -1.32
LDB7YBL006C ALR2P43553 858 aa6.79□□□□□ -1.32
LDB7YBL006C NMD5P46970 1048 aa6.79□□□□□ -1.32
LDB7YBL006C PEX8P53248 589 aa6.79□□□□□ -1.32
LDB7YBL006C ARP4P80428 489 aa6.79□□□□□ -1.32
LDB7YBL006C RHO3Q00245 231 aaKnown RBP6.79□□□□□ -1.32
LDB7YBL006C TFB2Q02939 513 aa6.79□□□□□ -1.32
LDB7YBL006C URH1Q04179 340 aa6.79□□□□□ -1.32
LDB7YBL006C BSC6Q08280 497 aa6.79□□□□□ -1.32
LDB7YBL006C SEM1O94742 89 aa6.78□□□□□ -1.32
LDB7YBL006C FUM1P08417 488 aaKnown RBP6.78□□□□□ -1.32
LDB7YBL006C HSP26P15992 214 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
LDB7YBL006C PET123P17558 318 aa6.78□□□□□ -1.32
LDB7YBL006C YCR099CP25657 155 aa6.78□□□□□ -1.32
LDB7YBL006C URA10P30402 227 aa6.78□□□□□ -1.32
LDB7YBL006C GDA1P32621 518 aa6.78□□□□□ -1.32
LDB7YBL006C SKN1P33336 771 aa6.78□□□□□ -1.32
LDB7YBL006C PEX5P35056 612 aa6.78□□□□□ -1.32
LDB7YBL006C LRG1P35688 1017 aa6.78□□□□□ -1.32
LDB7YBL006C SSN3P39073 555 aa6.78□□□□□ -1.32
LDB7YBL006C ARH1P48360 493 aa6.78□□□□□ -1.32
LDB7YBL006C RTS3P53289 263 aa6.78□□□□□ -1.32
LDB7YBL006C CSL4P53859 292 aaPredicted RBP6.78□□□□□ -1.32
LDB7YBL006C UTP6Q02354 440 aaKnown RBP6.78□□□□□ -1.32
LDB7YBL006C CTK1Q03957 528 aaKnown RBP6.78□□□□□ -1.32
LDB7YBL006C YDR109CQ04585 715 aa6.78□□□□□ -1.32
LDB7YBL006C CUE5Q08412 411 aaKnown RBP6.78□□□□□ -1.32
LDB7YBL006C ACM1Q08981 209 aa6.78□□□□□ -1.32
LDB7YBL006C YBR056W-AI2HB52 66 aa6.77□□□□□ -1.33
LDB7YBL006C TEF1P02994 458 aaKnown RBP6.77□□□□□ -1.33
LDB7YBL006C GCR1P07261 785 aa6.77□□□□□ -1.33
LDB7YBL006C SWI5P08153 709 aa6.77□□□□□ -1.33
LDB7YBL006C NSP1P14907 823 aaKnown RBP6.77□□□□□ -1.33
LDB7YBL006C PDC5P16467 563 aaKnown RBP6.77□□□□□ -1.33
LDB7YBL006C PHO3P24031 467 aa6.77□□□□□ -1.33
LDB7YBL006C YCR006CP25350 157 aa6.77□□□□□ -1.33
LDB7YBL006C RSC6P25632 483 aa6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms