RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W SMF1P38925 575 aa2.25□□□□□ -2.05
SNC1YAL030W YEL057CP39983 233 aa2.25□□□□□ -2.05
SNC1YAL030W ECM10P39987 644 aa2.25□□□□□ -2.05
SNC1YAL030W YJL068CP40363 299 aa2.25□□□□□ -2.05
SNC1YAL030W FAR3P46671 204 aa2.25□□□□□ -2.05
SNC1YAL030W DPB11P47027 764 aaPredicted RBP2.25□□□□□ -2.05
SNC1YAL030W ASN1P49089 572 aaKnown RBP2.25□□□□□ -2.05
SNC1YAL030W LYS4P49367 693 aaPredicted RBP2.25□□□□□ -2.05
SNC1YAL030W APT1P49435 187 aaKnown RBP2.25□□□□□ -2.05
SNC1YAL030W MRK1P50873 501 aa2.25□□□□□ -2.05
SNC1YAL030W DIA3P52290 468 aa2.25□□□□□ -2.05
SNC1YAL030W EFM6P53970 246 aa2.25□□□□□ -2.05
SNC1YAL030W ZDS2P54786 942 aa2.25□□□□□ -2.05
SNC1YAL030W VPS9P54787 451 aa2.25□□□□□ -2.05
SNC1YAL030W RSM28Q03430 361 aa2.25□□□□□ -2.05
SNC1YAL030W YDR131CQ03899 556 aa2.25□□□□□ -2.05
SNC1YAL030W BUD22Q04347 519 aaKnown RBP2.25□□□□□ -2.05
SNC1YAL030W YDR109CQ04585 715 aa2.25□□□□□ -2.05
SNC1YAL030W RQC1Q05468 723 aaKnown RBP2.25□□□□□ -2.05
SNC1YAL030W CYK3Q07533 885 aa2.25□□□□□ -2.05
SNC1YAL030W BUD7Q08754 746 aa2.25□□□□□ -2.05
SNC1YAL030W LEA1Q08963 238 aaPredicted RBP2.25□□□□□ -2.05
SNC1YAL030W ATG9Q12142 997 aa2.25□□□□□ -2.05
SNC1YAL030W INP53Q12271 1107 aa2.25□□□□□ -2.05
SNC1YAL030W AHA1Q12449 350 aaKnown RBP2.25□□□□□ -2.05
SNC1YAL030W RPN13O13563 156 aa2.24□□□□□ -2.05
SNC1YAL030W MF(ALPHA)1P01149 165 aa2.24□□□□□ -2.05
SNC1YAL030W PMS1P14242 873 aa2.24□□□□□ -2.05
SNC1YAL030W CLC1P17891 233 aa2.24□□□□□ -2.05
SNC1YAL030W CDC43P18898 376 aa2.24□□□□□ -2.05
SNC1YAL030W KIN3P22209 435 aa2.24□□□□□ -2.05
SNC1YAL030W CLB3P24870 427 aa2.24□□□□□ -2.05
SNC1YAL030W PRD1P25375 712 aa2.24□□□□□ -2.05
SNC1YAL030W PTC6P25646 442 aa2.24□□□□□ -2.05
SNC1YAL030W CDC60P26637 1090 aaKnown RBP2.24□□□□□ -2.05
SNC1YAL030W GSY2P27472 705 aa2.24□□□□□ -2.05
SNC1YAL030W SYN8P31377 255 aa2.24□□□□□ -2.05
SNC1YAL030W MRE11P32829 692 aa2.24□□□□□ -2.05
SNC1YAL030W SEC66P33754 206 aa2.24□□□□□ -2.05
SNC1YAL030W OTU2P38747 307 aaKnown RBP2.24□□□□□ -2.05
SNC1YAL030W APE4P38821 490 aa2.24□□□□□ -2.05
SNC1YAL030W SMC3P47037 1230 aa2.24□□□□□ -2.05
SNC1YAL030W RPS7BP48164 190 aaKnown RBP2.24□□□□□ -2.05
SNC1YAL030W STB4P50104 949 aa2.24□□□□□ -2.05
SNC1YAL030W VPS73P53142 486 aaKnown RBP2.24□□□□□ -2.05
SNC1YAL030W YGR127WP53275 312 aa2.24□□□□□ -2.05
SNC1YAL030W CIK1Q01649 594 aa2.24□□□□□ -2.05
SNC1YAL030W RMT2Q03305 412 aa2.24□□□□□ -2.05
SNC1YAL030W YMR155WQ03795 547 aa2.24□□□□□ -2.05
SNC1YAL030W ARG7Q04728 441 aa2.24□□□□□ -2.05
SNC1YAL030W ECM22Q05958 814 aaPredicted RBP2.24□□□□□ -2.05
SNC1YAL030W MRD1Q06106 887 aaKnown RBP2.24□□□□□ -2.05
SNC1YAL030W LUC7Q07508 261 aaPredicted RBP2.24□□□□□ -2.05
SNC1YAL030W RIM20Q12033 661 aa2.24□□□□□ -2.05
SNC1YAL030W ATG29Q12092 213 aa2.24□□□□□ -2.05
SNC1YAL030W AVL9Q12500 764 aa2.24□□□□□ -2.05
SNC1YAL030W SMC6Q12749 1114 aa2.24□□□□□ -2.05
SNC1YAL030W ILV2P07342 687 aaKnown RBP2.23□□□□□ -2.05
SNC1YAL030W ILS1P09436 1072 aaKnown RBP2.23□□□□□ -2.05
SNC1YAL030W HEM1P09950 548 aaPredicted RBP2.23□□□□□ -2.05
SNC1YAL030W MRP2P10663 115 aaPredicted RBP2.23□□□□□ -2.05
SNC1YAL030W SPE2P21182 396 aa2.23□□□□□ -2.05
SNC1YAL030W OPI1P21957 404 aa2.23□□□□□ -2.05
SNC1YAL030W SAT4P25333 603 aaKnown RBP2.23□□□□□ -2.05
SNC1YAL030W PUP3P25451 205 aaKnown RBP2.23□□□□□ -2.05
SNC1YAL030W ADK2P26364 225 aa2.23□□□□□ -2.05
SNC1YAL030W GPI10P30777 616 aa2.23□□□□□ -2.05
SNC1YAL030W GSH1P32477 678 aa2.23□□□□□ -2.05
SNC1YAL030W SSE2P32590 693 aaKnown RBP2.23□□□□□ -2.05
SNC1YAL030W SWI3P32591 825 aa2.23□□□□□ -2.05
SNC1YAL030W UGP1P32861 499 aaKnown RBP2.23□□□□□ -2.05
SNC1YAL030W RPC34P32910 317 aa2.23□□□□□ -2.05
SNC1YAL030W WBP1P33767 430 aaKnown RBP2.23□□□□□ -2.05
SNC1YAL030W CMC1P36064 111 aa2.23□□□□□ -2.05
SNC1YAL030W ADE17P38009 592 aaKnown RBP2.23□□□□□ -2.05
SNC1YAL030W MOH1P38191 138 aa2.23□□□□□ -2.05
SNC1YAL030W JEM1P40358 645 aa2.23□□□□□ -2.05
SNC1YAL030W TWF1P53250 332 aa2.23□□□□□ -2.05
SNC1YAL030W CTF4Q01454 927 aa2.23□□□□□ -2.05
SNC1YAL030W MAK10Q02197 733 aa2.23□□□□□ -2.05
SNC1YAL030W YMR206WQ03695 313 aa2.23□□□□□ -2.05
SNC1YAL030W GIS1Q03833 894 aa2.23□□□□□ -2.05
SNC1YAL030W VPS38Q05919 439 aa2.23□□□□□ -2.05
SNC1YAL030W ULA1Q12059 462 aa2.23□□□□□ -2.05
SNC1YAL030W LEU9Q12166 604 aaKnown RBP2.23□□□□□ -2.05
SNC1YAL030W YRF1-4O13559 1382 aa2.23□□□□□ -2.05
SNC1YAL030W STE12P13574 688 aa2.22□□□□□ -2.05
SNC1YAL030W BUD14P27637 709 aa2.22□□□□□ -2.05
SNC1YAL030W SEF1P34228 1148 aa2.22□□□□□ -2.05
SNC1YAL030W TCD2P36101 447 aaKnown RBP2.22□□□□□ -2.05
SNC1YAL030W NUP133P36161 1157 aa2.22□□□□□ -2.05
SNC1YAL030W APD1P38281 316 aa2.22□□□□□ -2.05
SNC1YAL030W ELO1P39540 310 aa2.22□□□□□ -2.05
SNC1YAL030W PAC2P39937 518 aa2.22□□□□□ -2.05
SNC1YAL030W YEL020CP39994 560 aa2.22□□□□□ -2.05
SNC1YAL030W BUR6P40096 142 aa2.22□□□□□ -2.05
SNC1YAL030W ALG5P40350 334 aa2.22□□□□□ -2.05
SNC1YAL030W PET130P47065 347 aa2.22□□□□□ -2.05
SNC1YAL030W APM1Q00776 475 aaPredicted RBP2.22□□□□□ -2.05
SNC1YAL030W YMR178WQ03219 274 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms