RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 ATG4CQ96DT6 458 aa10.51□□□□□ -0.73
TCF4-258ENST00000627320 TANC1Q9C0D5 1861 aa10.51□□□□□ -0.73
TCF4-258ENST00000627320 USP34Q70CQ2 3546 aa10.5□□□□□ -0.73
TCF4-258ENST00000627320 SMIM22K7EJ46 135 aa10.5□□□□□ -0.73
TCF4-258ENST00000627320 TLL1O43897 1013 aa10.5□□□□□ -0.73
TCF4-258ENST00000627320 GLRX3O76003 335 aaKnown RBP10.5□□□□□ -0.73
TCF4-258ENST00000627320 ZNF865P0CJ78 1059 aaPredicted RBP10.5□□□□□ -0.73
TCF4-258ENST00000627320 ACLYP53396 1101 aa10.5□□□□□ -0.73
TCF4-258ENST00000627320 SEPT2Q15019 361 aa10.5□□□□□ -0.73
TCF4-258ENST00000627320 SPTY2D1Q68D10 685 aaPredicted RBP10.5□□□□□ -0.73
TCF4-258ENST00000627320 MFSD5Q6N075 450 aa10.5□□□□□ -0.73
TCF4-258ENST00000627320 LBX2Q6XYB7 198 aa10.5□□□□□ -0.73
TCF4-258ENST00000627320 METTL16Q86W50 562 aaKnown RBP10.5□□□□□ -0.73
TCF4-258ENST00000627320 NCAPG2Q86XI2 1143 aa10.5□□□□□ -0.73
TCF4-258ENST00000627320 SLF2Q8IX21 1173 aa10.5□□□□□ -0.73
TCF4-258ENST00000627320 NEUROD6Q96NK8 337 aa10.5□□□□□ -0.73
TCF4-258ENST00000627320 SPATC1LQ9H0A9 340 aa10.5□□□□□ -0.73
TCF4-258ENST00000627320 STARD7Q9NQZ5 370 aa10.5□□□□□ -0.73
TCF4-258ENST00000627320 DDX49Q9Y6V7 483 aaKnown RBP10.5□□□□□ -0.73
TCF4-258ENST00000627320 PDS5AQ29RF7 1337 aaKnown RBP10.5□□□□□ -0.73
TCF4-258ENST00000627320 RARBP10826 455 aa10.49□□□□□ -0.73
TCF4-258ENST00000627320 IL15P40933 162 aaPredicted RBP10.49□□□□□ -0.73
TCF4-258ENST00000627320 ANKRD33Q7Z3H0 272 aa10.49□□□□□ -0.73
TCF4-258ENST00000627320 GTF3C2Q8WUA4 911 aaPredicted RBP10.49□□□□□ -0.73
TCF4-258ENST00000627320 PPP1R13LQ8WUF5 828 aa10.49□□□□□ -0.73
TCF4-258ENST00000627320 SSH1Q8WYL5 1049 aa10.49□□□□□ -0.73
TCF4-258ENST00000627320 TANGO6Q9C0B7 1094 aa10.49□□□□□ -0.73
TCF4-258ENST00000627320 PIH1D3Q9NQM4 214 aaKnown RBP10.49□□□□□ -0.73
TCF4-258ENST00000627320 C5orf42Q9H799 3197 aa10.49□□□□□ -0.73
TCF4-258ENST00000627320 TRIP12Q14669 1992 aaPredicted RBP10.48□□□□□ -0.73
TCF4-258ENST00000627320 SHMT1P34896 483 aa10.48□□□□□ -0.73
TCF4-258ENST00000627320 CCL23P55773 120 aa10.48□□□□□ -0.73
TCF4-258ENST00000627320 KCNA10Q16322 511 aa10.48□□□□□ -0.73
TCF4-258ENST00000627320 PPP2R2DQ66LE6 453 aa10.48□□□□□ -0.73
TCF4-258ENST00000627320 CCSAPQ6IQ19 270 aaPredicted RBP10.48□□□□□ -0.73
TCF4-258ENST00000627320 WDR63Q8IWG1 891 aa10.48□□□□□ -0.73
TCF4-258ENST00000627320 SPICE1Q8N0Z3 855 aa10.48□□□□□ -0.73
TCF4-258ENST00000627320 MIGA1Q8NAN2 632 aa10.48□□□□□ -0.73
TCF4-258ENST00000627320 MEIS3Q99687 375 aa10.48□□□□□ -0.73
TCF4-258ENST00000627320 TRIM34Q9BYJ4 488 aa10.48□□□□□ -0.73
TCF4-258ENST00000627320 KIAA1683Q9H0B3 1180 aa10.48□□□□□ -0.73
TCF4-258ENST00000627320 SLC28A3Q9HAS3 691 aa10.48□□□□□ -0.73
TCF4-258ENST00000627320 LRP2BPQ9P2M1 347 aa10.48□□□□□ -0.73
TCF4-258ENST00000627320 MTCH2Q9Y6C9 303 aa10.48□□□□□ -0.73
TCF4-258ENST00000627320 TRIOO75962 3097 aa10.47□□□□□ -0.73
TCF4-258ENST00000627320 SIP14410 1827 aa10.47□□□□□ -0.73
TCF4-258ENST00000627320 ARID4AP29374 1257 aaPredicted RBP10.47□□□□□ -0.73
TCF4-258ENST00000627320 PLCD1P51178 756 aa10.47□□□□□ -0.73
TCF4-258ENST00000627320 GSTO1P78417 241 aa10.47□□□□□ -0.73
TCF4-258ENST00000627320 NHLH1Q02575 133 aa10.47□□□□□ -0.73
TCF4-258ENST00000627320 PPIGQ13427 754 aaKnown RBP eCLIP10.47□□□□□ -0.73
TCF4-258ENST00000627320 TMEM132BQ14DG7 1078 aa10.47□□□□□ -0.73
TCF4-258ENST00000627320 NAA16Q6N069 864 aaPredicted RBP10.47□□□□□ -0.73
TCF4-258ENST00000627320 TATDN1Q6P1N9 297 aa10.47□□□□□ -0.73
TCF4-258ENST00000627320 SCLYQ96I15 445 aa10.47□□□□□ -0.73
TCF4-258ENST00000627320 WNT8AQ9H1J5 351 aa10.47□□□□□ -0.73
TCF4-258ENST00000627320 FBXO28Q9NVF7 368 aa10.47□□□□□ -0.73
TCF4-258ENST00000627320 MSRAQ9UJ68 235 aa10.47□□□□□ -0.73
TCF4-258ENST00000627320 MYH4Q9Y623 1939 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 DCDC2CA8MYV0 355 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 ERC2O15083 957 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 GPR37L1O60883 481 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 CYP2E1P05181 493 aaPredicted RBP10.46□□□□□ -0.73
TCF4-258ENST00000627320 CA3P07451 260 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 LDHCP07864 332 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 UBTFL1P0CB47 393 aaPredicted RBP10.46□□□□□ -0.73
TCF4-258ENST00000627320 CYP2D6P10635 497 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 CDK7P50613 346 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 BEX3Q00994 111 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 ABCB5Q2M3G0 1257 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 TMCO2Q7Z6W1 182 aaPredicted RBP10.46□□□□□ -0.73
TCF4-258ENST00000627320 RNF180Q86T96 592 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 FOXP4Q8IVH2 680 aaPredicted RBP10.46□□□□□ -0.73
TCF4-258ENST00000627320 FAM126BQ8IXS8 530 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 KLHDC9Q8NEP7 349 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 HERVK_113Q902F9 699 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 DHX36Q9H2U1 1008 aaKnown RBP10.46□□□□□ -0.73
TCF4-258ENST00000627320 COPRSQ9NQ92 184 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 TNNQ9UQP3 1299 aa10.46□□□□□ -0.73
TCF4-258ENST00000627320 KMT2EQ8IZD2 1858 aa10.45□□□□□ -0.74
TCF4-258ENST00000627320 ROBO3Q96MS0 1386 aa10.45□□□□□ -0.74
TCF4-258ENST00000627320 CTAGE5O15320 804 aa10.45□□□□□ -0.74
TCF4-258ENST00000627320 SNAI1O95863 264 aaPredicted RBP10.45□□□□□ -0.74
TCF4-258ENST00000627320 ASGR1P07306 291 aa10.45□□□□□ -0.74
TCF4-258ENST00000627320 ZAP70P43403 619 aa10.45□□□□□ -0.74
TCF4-258ENST00000627320 TTLL4Q14679 1199 aa10.45□□□□□ -0.74
TCF4-258ENST00000627320 MVPQ14764 893 aaKnown RBP10.45□□□□□ -0.74
TCF4-258ENST00000627320 RAB30Q15771 203 aa10.45□□□□□ -0.74
TCF4-258ENST00000627320 ZNF792Q3KQV3 632 aa10.45□□□□□ -0.74
TCF4-258ENST00000627320 TMEM63BQ5T3F8 832 aa10.45□□□□□ -0.74
TCF4-258ENST00000627320 UIMC1Q96RL1 719 aa10.45□□□□□ -0.74
TCF4-258ENST00000627320 MMP19Q99542 508 aa10.45□□□□□ -0.74
TCF4-258ENST00000627320 DBNDD2Q9BQY9 259 aa10.45□□□□□ -0.74
TCF4-258ENST00000627320 TINF2Q9BSI4 451 aa10.45□□□□□ -0.74
TCF4-258ENST00000627320 IL23AQ9NPF7 189 aa10.45□□□□□ -0.74
TCF4-258ENST00000627320 TLR7Q9NYK1 1049 aaKnown RBP10.45□□□□□ -0.74
TCF4-258ENST00000627320 ZHX1Q9UKY1 873 aaPredicted RBP10.45□□□□□ -0.74
TCF4-258ENST00000627320 GREB1LQ9C091 1923 aaPredicted RBP10.45□□□□□ -0.74
TCF4-258ENST00000627320 CFAP54Q96N23 3096 aa10.44□□□□□ -0.74
TCF4-258ENST00000627320 ASTN1O14525 1302 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms