RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 ADCY3O60266 1144 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 CHUKO15111 745 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 SNRPA1P09661 255 aaKnown RBP10.19□□□□□ -0.78
COL12A1-211ENST00000615798 PPP1R2P41236 205 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 STAT2P52630 851 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 CCDC42Q96M95 316 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 GUCA1BQ9UMX6 200 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 ZFYVE16Q7Z3T8 1539 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 COPB1P53618 953 aaKnown RBP10.19□□□□□ -0.78
COL12A1-211ENST00000615798 IFIT5Q13325 482 aaKnown RBP10.19□□□□□ -0.78
COL12A1-211ENST00000615798 HECW2Q9P2P5 1572 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 STX2P32856 288 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 TRIM47Q96LD4 638 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 HOMER3Q9NSC5 361 aa10.19□□□□□ -0.78
COL12A1-211ENST00000615798 KARSQ15046 597 aaKnown RBP10.18□□□□□ -0.78
COL12A1-211ENST00000615798 PPP2R5BQ15173 497 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 GNPTABQ3T906 1256 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 CXorf56Q9H5V9 222 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 PARP2Q9UGN5 583 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 NEURL4Q96JN8 1562 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 GRK2P25098 689 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 IL15P40933 162 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-211ENST00000615798 CCDC144BQ3MJ40 725 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 WAPLQ7Z5K2 1190 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 LUZP2Q86TE4 346 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.18□□□□□ -0.78
COL12A1-211ENST00000615798 AMOTL2Q9Y2J4 779 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 ATP6V0A2Q9Y487 856 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 DKK3Q9UBP4 350 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 BIN1O00499 593 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 MTRF1O75570 445 aaKnown RBP10.18□□□□□ -0.78
COL12A1-211ENST00000615798 KRT2P35908 639 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 PLCB3Q01970 1234 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 LETM2Q2VYF4 491 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 OLFML1Q6UWY5 402 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 AHI1Q8N157 1196 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 RNF169Q8NCN4 708 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 GID8Q9NWU2 228 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 CDC42BPBQ9Y5S2 1711 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 SESTD1Q86VW0 696 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 UBL4BQ8N7F7 174 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 KAT6AQ92794 2004 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 TRIM16O95361 564 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 PTGS1P23219 599 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 MFSD4BQ5TF39 518 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 KDM6BO15054 1643 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 GNAT2P19087 354 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 CCT5P48643 541 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 SLF2Q8IX21 1173 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 KRT23Q9C075 422 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 DISC1Q9NRI5 854 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 WDHD1O75717 1129 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-211ENST00000615798 ATP2B2Q01814 1243 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 CCDC80Q76M96 950 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 NAPBQ9H115 298 aa10.18□□□□□ -0.78
COL12A1-211ENST00000615798 PDE6AP16499 860 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 KRT71Q3SY84 523 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 PPP6R3Q5H9R7 873 aaPredicted RBP10.17□□□□□ -0.78
COL12A1-211ENST00000615798 SYCP3Q8IZU3 236 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 HAUS7Q99871 368 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 LZTFL1Q9NQ48 299 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 GRM8O00222 908 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 DMPKQ09013 629 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 IFT88Q13099 833 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 KRR1Q13601 381 aaKnown RBP10.17□□□□□ -0.78
COL12A1-211ENST00000615798 RINLQ6ZS11 566 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 GDAP1L1Q96MZ0 367 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 TSKSQ9UJT2 592 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 FKBP4Q02790 459 aaKnown RBP eCLIP10.17□□□□□ -0.78
COL12A1-211ENST00000615798 NECAB1Q8N987 351 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 DYDC2Q96IM9 177 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 EHMT1Q9H9B1 1298 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 SLC12A7Q9Y666 1083 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 PARD3BQ8TEW8 1205 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 GPR101Q96P66 508 aaPredicted RBP10.17□□□□□ -0.78
COL12A1-211ENST00000615798 SLC4A7Q9Y6M7 1214 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 CNGA2Q16280 664 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 FGFR1OP2Q9NVK5 253 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 G3BP2Q9UN86 482 aaKnown RBP10.17□□□□□ -0.78
COL12A1-211ENST00000615798 TRIM15Q9C019 465 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 SYTL2Q9HCH5 934 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 EMC3Q9P0I2 261 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 CHL1O00533 1208 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 MGARPQ8TDB4 240 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 SERPINB1P30740 379 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 MCMDC2Q4G0Z9 681 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 CDH24Q86UP0 819 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 MRPS27Q92552 414 aaKnown RBP10.17□□□□□ -0.78
COL12A1-211ENST00000615798 CNBD2Q96M20 576 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 GEMIN8Q9NWZ8 242 aaKnown RBP10.17□□□□□ -0.78
COL12A1-211ENST00000615798 AFG3L2Q9Y4W6 797 aa10.17□□□□□ -0.78
COL12A1-211ENST00000615798 CDK12Q9NYV4 1490 aaPredicted RBP10.17□□□□□ -0.78
COL12A1-211ENST00000615798 RECQLP46063 649 aaPredicted RBP10.16□□□□□ -0.78
COL12A1-211ENST00000615798 TRIM42Q8IWZ5 723 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 RBSNQ9H1K0 784 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 PRDM11Q9NQV5 511 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 SLC5A1P13866 664 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 SYKP43405 635 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 MMEL1Q495T6 779 aa10.16□□□□□ -0.78
COL12A1-211ENST00000615798 LRRC8BQ6P9F7 803 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms