RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 PRKG1Q13976 671 aa16.36■□□□□ 0.21
SNPH-203ENST00000614659 CALCRLQ16602 461 aa16.36■□□□□ 0.21
SNPH-203ENST00000614659 SEL1L2Q5TEA6 688 aa16.36■□□□□ 0.21
SNPH-203ENST00000614659 PDE8BO95263 885 aa16.36■□□□□ 0.21
SNPH-203ENST00000614659 KRT9P35527 623 aa16.36■□□□□ 0.21
SNPH-203ENST00000614659 CCDC117Q8IWD4 279 aaPredicted RBP16.36■□□□□ 0.21
SNPH-203ENST00000614659 IFT20Q8IY31 132 aa16.36■□□□□ 0.21
SNPH-203ENST00000614659 KIFAP3Q92845 792 aa16.36■□□□□ 0.21
SNPH-203ENST00000614659 RCOR1Q9UKL0 485 aa16.36■□□□□ 0.21
SNPH-203ENST00000614659 LAD1O00515 517 aa16.36■□□□□ 0.21
SNPH-203ENST00000614659 FMNL1O95466 1100 aaPredicted RBP16.35■□□□□ 0.21
SNPH-203ENST00000614659 LONP1P36776 959 aaKnown RBP16.35■□□□□ 0.21
SNPH-203ENST00000614659 GRAPQ13588 217 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 PROSER3Q2NL68 480 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 LRRC24Q50LG9 513 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 GRAPLQ8TC17 118 aaPredicted RBP16.35■□□□□ 0.21
SNPH-203ENST00000614659 PIGBQ92521 554 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 CUEDC2Q9H467 287 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 MRPL11Q9Y3B7 192 aaKnown RBP16.35■□□□□ 0.21
SNPH-203ENST00000614659 NCOA3Q9Y6Q9 1424 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 ELF2Q15723 593 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 CIAPIN1Q6FI81 312 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 BLIDQ8IZY5 108 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 AFAP1L1Q8TED9 768 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 SEC62Q99442 399 aaKnown RBP16.35■□□□□ 0.21
SNPH-203ENST00000614659 PLIN2Q99541 437 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 RASSF4Q9H2L5 321 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 PTPRMP28827 1452 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 ATP2C2O75185 946 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 NECTIN1Q15223 517 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 SNX29Q8TEQ0 813 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 ATP5DP30049 168 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 SYCE1Q8N0S2 351 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 ATP8A2Q9NTI2 1148 aa16.35■□□□□ 0.21
SNPH-203ENST00000614659 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
SNPH-203ENST00000614659 ERCC5P28715 1186 aaPredicted RBP16.34■□□□□ 0.21
SNPH-203ENST00000614659 ARID5AQ03989 594 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 SPATA1Q5VX52 437 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 C8orf74Q6P047 294 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 SPATA24Q86W54 205 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 REXO1Q8N1G1 1221 aaKnown RBP16.34■□□□□ 0.21
SNPH-203ENST00000614659 RNF26Q9BY78 433 aaPredicted RBP16.34■□□□□ 0.21
SNPH-203ENST00000614659 TAB2Q9NYJ8 693 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 VPS54Q9P1Q0 977 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 PPRC1Q5VV67 1664 aaKnown RBP16.34■□□□□ 0.21
SNPH-203ENST00000614659 A0A1W2PRG0 241 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 CYP21A2P08686 494 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 IREB2P48200 963 aaKnown RBP16.34■□□□□ 0.21
SNPH-203ENST00000614659 DOK7Q18PE1 504 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 CCDC121Q6ZUS5 278 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 ZC3H13Q5T200 1668 aaKnown RBP16.34■□□□□ 0.21
SNPH-203ENST00000614659 TFAP4Q01664 338 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 RAPGEF1Q13905 1077 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 CERKLQ49MI3 558 aaPredicted RBP16.34■□□□□ 0.21
SNPH-203ENST00000614659 ATRIPQ8WXE1 791 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 NARFQ9UHQ1 456 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 BTDP43251 543 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 CEP83Q9Y592 693 aa16.34■□□□□ 0.21
SNPH-203ENST00000614659 TXKP42681 527 aa16.33■□□□□ 0.21
SNPH-203ENST00000614659 KIAA0825Q8IV33 1275 aa16.33■□□□□ 0.21
SNPH-203ENST00000614659 ALDH8A1Q9H2A2 487 aaPredicted RBP16.33■□□□□ 0.21
SNPH-203ENST00000614659 NEURL4Q96JN8 1562 aa16.33■□□□□ 0.21
SNPH-203ENST00000614659 IQGAP1P46940 1657 aa16.33■□□□□ 0.21
SNPH-203ENST00000614659 PXDNLA1KZ92 1463 aa16.33■□□□□ 0.21
SNPH-203ENST00000614659 TNKSO95271 1327 aa16.33■□□□□ 0.21
SNPH-203ENST00000614659 MMP10P09238 476 aa16.33■□□□□ 0.21
SNPH-203ENST00000614659 SCG2P13521 617 aa16.33■□□□□ 0.21
SNPH-203ENST00000614659 GADL1Q6ZQY3 521 aa16.33■□□□□ 0.21
SNPH-203ENST00000614659 SREK1Q8WXA9 508 aaKnown RBP16.33■□□□□ 0.21
SNPH-203ENST00000614659 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.33■□□□□ 0.21
SNPH-203ENST00000614659 DIP2CQ9Y2E4 1556 aa16.33■□□□□ 0.2
SNPH-203ENST00000614659 WDR19Q8NEZ3 1342 aa16.33■□□□□ 0.2
SNPH-203ENST00000614659 EFCAB8A8MWE9 144 aa16.33■□□□□ 0.2
SNPH-203ENST00000614659 PRDM1O75626 825 aa16.33■□□□□ 0.2
SNPH-203ENST00000614659 STRN3Q13033 797 aa16.33■□□□□ 0.2
SNPH-203ENST00000614659 ZYXQ15942 572 aaKnown RBP16.33■□□□□ 0.2
SNPH-203ENST00000614659 COA1Q9GZY4 146 aa16.33■□□□□ 0.2
SNPH-203ENST00000614659 DHX36Q9H2U1 1008 aaKnown RBP16.33■□□□□ 0.2
SNPH-203ENST00000614659 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.33■□□□□ 0.2
SNPH-203ENST00000614659 B4GALNT4Q76KP1 1039 aa16.33■□□□□ 0.2
SNPH-203ENST00000614659 BCL2L12Q9HB09 334 aa16.33■□□□□ 0.2
SNPH-203ENST00000614659 CLTCQ00610 1675 aaKnown RBP16.33■□□□□ 0.2
SNPH-203ENST00000614659 IQSEC2Q5JU85 1478 aa16.33■□□□□ 0.2
SNPH-203ENST00000614659 NDC80O14777 642 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 STX10O60499 249 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 NDUFA8P51970 172 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 MORC3Q14149 939 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 DCAF17Q5H9S7 520 aaPredicted RBP16.32■□□□□ 0.2
SNPH-203ENST00000614659 NSMFQ6X4W1 530 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 CSRNP2Q9H175 543 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 TLR7Q9NYK1 1049 aaKnown RBP16.32■□□□□ 0.2
SNPH-203ENST00000614659 C1orf167Q5SNV9 1468 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 ADD2P35612 726 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 SLC8A3P57103 927 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 SNX16P57768 344 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 OTUD6BQ8N6M0 293 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 SPON1Q9HCB6 807 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 DNM3Q9UQ16 869 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 KCNJ18B7U540 433 aa16.32■□□□□ 0.2
SNPH-203ENST00000614659 TCP10L2B9ZVM9 353 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms