RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 C8orf37Q96NL8 207 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 NLRC4Q9NPP4 1024 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 RBL2Q08999 1139 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 CCDC26Q8TAB7 109 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 UBLCP1Q8WVY7 318 aaPredicted RBP13.84□□□□□ -0.19
CDH1-212ENST00000611625 BICD1Q96G01 975 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 PCDHB6Q9Y5E3 794 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 OR52Z1P0C646 297 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 EZRP15311 586 aaKnown RBP13.83□□□□□ -0.2
CDH1-212ENST00000611625 CLCN6P51797 869 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 KLHL30Q0D2K2 578 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 CFAP221Q4G0U5 840 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 CPLX4Q7Z7G2 160 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 NELFCDQ8IXH7 590 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 SELENOSQ9BQE4 189 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 GLT8D2Q9H1C3 349 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 TSKSQ9UJT2 592 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 GGA1Q9UJY5 639 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 SRPRBQ9Y5M8 271 aaKnown RBP13.83□□□□□ -0.2
CDH1-212ENST00000611625 COL3A1P02461 1466 aaPredicted RBP13.83□□□□□ -0.2
CDH1-212ENST00000611625 COBLO75128 1261 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 PPFIA1Q13136 1202 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 UBE4AQ14139 1066 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 TRAPPC3LQ5T215 181 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 STMN4Q9H169 189 aaPredicted RBP13.83□□□□□ -0.2
CDH1-212ENST00000611625 TBC1D7Q9P0N9 293 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 PAK2Q13177 524 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 SFMBT2Q5VUG0 894 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 STOX1Q6ZVD7 989 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 FMNL3Q8IVF7 1028 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 TTLL11Q8NHH1 800 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 EYA3Q99504 573 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 OSBPL5Q9H0X9 879 aaPredicted RBP13.83□□□□□ -0.2
CDH1-212ENST00000611625 PTPRUQ92729 1446 aa13.83□□□□□ -0.2
CDH1-212ENST00000611625 HPDP32754 393 aaPredicted RBP13.82□□□□□ -0.2
CDH1-212ENST00000611625 STRBPQ96SI9 672 aaKnown RBP13.82□□□□□ -0.2
CDH1-212ENST00000611625 SEC31BQ9NQW1 1179 aa13.82□□□□□ -0.2
CDH1-212ENST00000611625 RESP18Q5W5W9 173 aa13.82□□□□□ -0.2
CDH1-212ENST00000611625 MB21D2Q8IYB1 491 aaPredicted RBP13.82□□□□□ -0.2
CDH1-212ENST00000611625 IPO4Q8TEX9 1081 aaKnown RBP13.82□□□□□ -0.2
CDH1-212ENST00000611625 NUCKS1Q9H1E3 243 aaKnown RBP13.82□□□□□ -0.2
CDH1-212ENST00000611625 BIN2Q9UBW5 565 aaPredicted RBP13.82□□□□□ -0.2
CDH1-212ENST00000611625 MTRF1LQ9UGC7 380 aaKnown RBP13.82□□□□□ -0.2
CDH1-212ENST00000611625 CCNL1Q9UK58 526 aaPredicted RBP13.82□□□□□ -0.2
CDH1-212ENST00000611625 SMIM23A6NLE4 172 aa13.82□□□□□ -0.2
CDH1-212ENST00000611625 A6NNZ2 444 aa13.82□□□□□ -0.2
CDH1-212ENST00000611625 TUBB8Q3ZCM7 444 aa13.82□□□□□ -0.2
CDH1-212ENST00000611625 GALNT17Q6IS24 598 aa13.82□□□□□ -0.2
CDH1-212ENST00000611625 TBC1D10CQ8IV04 446 aa13.82□□□□□ -0.2
CDH1-212ENST00000611625 KCNF1Q9H3M0 494 aa13.82□□□□□ -0.2
CDH1-212ENST00000611625 MKRN1Q9UHC7 482 aaKnown RBP13.82□□□□□ -0.2
CDH1-212ENST00000611625 TECP42680 631 aa13.82□□□□□ -0.2
CDH1-212ENST00000611625 LONRF2Q1L5Z9 754 aa13.82□□□□□ -0.2
CDH1-212ENST00000611625 AEBP2Q6ZN18 517 aaPredicted RBP13.82□□□□□ -0.2
CDH1-212ENST00000611625 GPATCH11Q8N954 259 aa13.82□□□□□ -0.2
CDH1-212ENST00000611625 KLRF2D3W0D1 207 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 RASGRF1Q13972 1273 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 B4GALNT4Q76KP1 1039 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 ANKS4BQ8N8V4 417 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 EEF2KMTQ96G04 330 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 RBM17Q96I25 401 aaKnown RBP13.81□□□□□ -0.2
CDH1-212ENST00000611625 BPIFA3Q9BQP9 254 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 RABEP2Q9H5N1 569 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 INCENPQ9NQS7 918 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 CEP104O60308 925 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 RAD51AP2Q09MP3 1159 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 PLS1Q14651 629 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 NEK8Q86SG6 692 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 PDE11AQ9HCR9 933 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 ATP8A2Q9NTI2 1148 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 MYO1AQ9UBC5 1043 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 FRMD4BQ9Y2L6 1034 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 SOWAHDA6NJG2 315 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 KIF4AO95239 1232 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 KLHL7Q8IXQ5 586 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 LRRC45Q96CN5 670 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 NEURL4Q96JN8 1562 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 CCDC77Q9BR77 488 aa13.81□□□□□ -0.2
CDH1-212ENST00000611625 SOS2Q07890 1332 aaPredicted RBP13.8□□□□□ -0.2
CDH1-212ENST00000611625 WDR19Q8NEZ3 1342 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 USP27XA6NNY8 438 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 PTPREP23469 700 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 RABL6Q3YEC7 729 aaPredicted RBP13.8□□□□□ -0.2
CDH1-212ENST00000611625 CCDC114Q96M63 670 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 HYOU1Q9Y4L1 999 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 A0A1W2PRG0 241 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 CCDC151A5D8V7 595 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 CALUO43852 315 aaPredicted RBP13.8□□□□□ -0.2
CDH1-212ENST00000611625 GOLGA8HP0CJ92 632 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 DYNLL1P63167 89 aaKnown RBP13.8□□□□□ -0.2
CDH1-212ENST00000611625 NAA30Q147X3 362 aaPredicted RBP13.8□□□□□ -0.2
CDH1-212ENST00000611625 RPS6KA1Q15418 735 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 USPL1Q5W0Q7 1092 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 NCAPH2Q6IBW4 605 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 RGS22Q8NE09 1264 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 TUBGCP2Q9BSJ2 902 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 USP32Q8NFA0 1604 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 MYOCDQ8IZQ8 938 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 EPSTI1Q96J88 318 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 UIMC1Q96RL1 719 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms