RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 STX8Q9UNK0 236 aa17.18■□□□□ 0.34
HDDC2-204ENST00000608295 F5H6K3 240 aa17.17■□□□□ 0.34
HDDC2-204ENST00000608295 TTLL1O95922 423 aa17.17■□□□□ 0.34
HDDC2-204ENST00000608295 MFAP1P55081 439 aaKnown RBP17.17■□□□□ 0.34
HDDC2-204ENST00000608295 CCNA1P78396 465 aa17.17■□□□□ 0.34
HDDC2-204ENST00000608295 KLRC3Q07444 240 aa17.17■□□□□ 0.34
HDDC2-204ENST00000608295 CCL14Q16627 93 aa17.17■□□□□ 0.34
HDDC2-204ENST00000608295 LBX2Q6XYB7 198 aa17.17■□□□□ 0.34
HDDC2-204ENST00000608295 NKX2-3Q8TAU0 364 aa17.17■□□□□ 0.34
HDDC2-204ENST00000608295 NUDT12Q9BQG2 462 aa17.17■□□□□ 0.34
HDDC2-204ENST00000608295 MOV10L1Q9BXT6 1211 aaKnown RBP17.17■□□□□ 0.34
HDDC2-204ENST00000608295 GJD2Q9UKL4 321 aa17.17■□□□□ 0.34
HDDC2-204ENST00000608295 NEDD4P46934 1319 aa17.17■□□□□ 0.34
HDDC2-204ENST00000608295 HIP1O00291 1037 aa17.16■□□□□ 0.34
HDDC2-204ENST00000608295 IRF5Q13568 498 aa17.16■□□□□ 0.34
HDDC2-204ENST00000608295 ALX1Q15699 326 aa17.16■□□□□ 0.34
HDDC2-204ENST00000608295 NCAPG2Q86XI2 1143 aa17.16■□□□□ 0.34
HDDC2-204ENST00000608295 SOCS4Q8WXH5 440 aa17.16■□□□□ 0.34
HDDC2-204ENST00000608295 SHISA4Q96DD7 197 aa17.16■□□□□ 0.34
HDDC2-204ENST00000608295 SPATC1LQ9H0A9 340 aa17.16■□□□□ 0.34
HDDC2-204ENST00000608295 IVNS1ABPQ9Y6Y0 642 aa17.16■□□□□ 0.34
HDDC2-204ENST00000608295 TNRC18O15417 2968 aaPredicted RBP17.15■□□□□ 0.34
HDDC2-204ENST00000608295 HMGCRP04035 888 aa17.15■□□□□ 0.34
HDDC2-204ENST00000608295 ZKSCAN1P17029 563 aaPredicted RBP17.15■□□□□ 0.34
HDDC2-204ENST00000608295 ERCC3P19447 782 aa17.15■□□□□ 0.34
HDDC2-204ENST00000608295 IKQ13123 557 aaPredicted RBP17.15■□□□□ 0.34
HDDC2-204ENST00000608295 SLFN13Q68D06 897 aa17.15■□□□□ 0.34
HDDC2-204ENST00000608295 KIFC2Q96AC6 838 aa17.15■□□□□ 0.34
HDDC2-204ENST00000608295 HOXC10Q9NYD6 342 aa17.15■□□□□ 0.34
HDDC2-204ENST00000608295 ANAPC4Q9UJX5 808 aa17.15■□□□□ 0.34
HDDC2-204ENST00000608295 PPP1R9AQ9ULJ8 1098 aa17.15■□□□□ 0.34
HDDC2-204ENST00000608295 RGS2P41220 211 aa17.14■□□□□ 0.33
HDDC2-204ENST00000608295 TMEM132BQ14DG7 1078 aa17.14■□□□□ 0.33
HDDC2-204ENST00000608295 PXYLP1Q8TE99 480 aa17.14■□□□□ 0.33
HDDC2-204ENST00000608295 DEFB118Q96PH6 123 aa17.14■□□□□ 0.33
HDDC2-204ENST00000608295 APBA2Q99767 749 aa17.14■□□□□ 0.33
HDDC2-204ENST00000608295 SLF1Q9BQI6 1058 aa17.14■□□□□ 0.33
HDDC2-204ENST00000608295 ZKSCAN3Q9BRR0 538 aa17.14■□□□□ 0.33
HDDC2-204ENST00000608295 IL17RBQ9NRM6 502 aa17.14■□□□□ 0.33
HDDC2-204ENST00000608295 ZMYM6O95789 1325 aa17.14■□□□□ 0.33
HDDC2-204ENST00000608295 PDE4DIPQ5VU43 2346 aa17.13■□□□□ 0.33
HDDC2-204ENST00000608295 ZNF236Q9UL36 1845 aa17.13■□□□□ 0.33
HDDC2-204ENST00000608295 ORC4O43929 436 aa17.13■□□□□ 0.33
HDDC2-204ENST00000608295 PRKAR2AP13861 404 aaKnown RBP17.13■□□□□ 0.33
HDDC2-204ENST00000608295 MCCP23508 829 aa17.13■□□□□ 0.33
HDDC2-204ENST00000608295 MAP2K5Q13163 448 aa17.13■□□□□ 0.33
HDDC2-204ENST00000608295 CCDC96Q2M329 555 aa17.13■□□□□ 0.33
HDDC2-204ENST00000608295 MORN1Q5T089 497 aa17.13■□□□□ 0.33
HDDC2-204ENST00000608295 MFSD6Q6ZSS7 791 aa17.13■□□□□ 0.33
HDDC2-204ENST00000608295 CPXCR1Q8N123 301 aa17.13■□□□□ 0.33
HDDC2-204ENST00000608295 PLXNA1Q9UIW2 1896 aa17.13■□□□□ 0.33
HDDC2-204ENST00000608295 FRMPD3Q5JV73 1810 aa17.12■□□□□ 0.33
HDDC2-204ENST00000608295 ZNFX1Q9P2E3 1918 aaKnown RBP17.12■□□□□ 0.33
HDDC2-204ENST00000608295 VWA5AO00534 786 aa17.12■□□□□ 0.33
HDDC2-204ENST00000608295 ZNF213O14771 459 aa17.12■□□□□ 0.33
HDDC2-204ENST00000608295 PTPREP23469 700 aa17.12■□□□□ 0.33
HDDC2-204ENST00000608295 ADORA2AP29274 412 aa17.12■□□□□ 0.33
HDDC2-204ENST00000608295 SNAP25P60880 206 aa17.12■□□□□ 0.33
HDDC2-204ENST00000608295 AKNAD1Q5T1N1 836 aa17.12■□□□□ 0.33
HDDC2-204ENST00000608295 KCTD1Q719H9 257 aa17.12■□□□□ 0.33
HDDC2-204ENST00000608295 CENPQQ7L2Z9 268 aaPredicted RBP17.12■□□□□ 0.33
HDDC2-204ENST00000608295 MB21D1Q8N884 522 aa17.12■□□□□ 0.33
HDDC2-204ENST00000608295 NPLOC4Q8TAT6 608 aa17.12■□□□□ 0.33
HDDC2-204ENST00000608295 STAG1Q8WVM7 1258 aa17.12■□□□□ 0.33
HDDC2-204ENST00000608295 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.12■□□□□ 0.336e-7■■■■□ 21.6
HDDC2-204ENST00000608295 FLRT1Q9NZU1 646 aa17.12■□□□□ 0.33
HDDC2-204ENST00000608295 CTDP1Q9Y5B0 961 aaPredicted RBP17.12■□□□□ 0.33
HDDC2-204ENST00000608295 FRMPD2Q68DX3 1309 aaPredicted RBP17.12■□□□□ 0.33
HDDC2-204ENST00000608295 TMEM232C9JQI7 657 aa17.11■□□□□ 0.33
HDDC2-204ENST00000608295 BMP3P12645 472 aa17.11■□□□□ 0.33
HDDC2-204ENST00000608295 TAL1P17542 331 aaPredicted RBP17.11■□□□□ 0.33
HDDC2-204ENST00000608295 CHMLP26374 656 aa17.11■□□□□ 0.33
HDDC2-204ENST00000608295 SLC1A4P43007 532 aa17.11■□□□□ 0.33
HDDC2-204ENST00000608295 GRB14Q14449 540 aa17.11■□□□□ 0.33
HDDC2-204ENST00000608295 GMCL1P1Q8NEA9 526 aa17.11■□□□□ 0.33
HDDC2-204ENST00000608295 U2AF1L4Q8WU68 220 aaKnown RBP17.11■□□□□ 0.33
HDDC2-204ENST00000608295 RAVER2Q9HCJ3 691 aaKnown RBP17.11■□□□□ 0.33
HDDC2-204ENST00000608295 SLC15A5A6NIM6 579 aa17.1■□□□□ 0.33
HDDC2-204ENST00000608295 B4E1Z4 1266 aa17.1■□□□□ 0.33
HDDC2-204ENST00000608295 NEFLP07196 543 aa17.1■□□□□ 0.33
HDDC2-204ENST00000608295 PGK2P07205 417 aa17.1■□□□□ 0.33
HDDC2-204ENST00000608295 GJB1P08034 283 aa17.1■□□□□ 0.33
HDDC2-204ENST00000608295 PTH1RQ03431 593 aa17.1■□□□□ 0.33
HDDC2-204ENST00000608295 SNRNP48Q6IEG0 339 aaKnown RBP17.1■□□□□ 0.33
HDDC2-204ENST00000608295 DPP9Q86TI2 863 aa17.1■□□□□ 0.33
HDDC2-204ENST00000608295 TICAM2Q86XR7 235 aa17.1■□□□□ 0.33
HDDC2-204ENST00000608295 USP6NLQ92738 828 aa17.1■□□□□ 0.33
HDDC2-204ENST00000608295 CCDC136Q96JN2 1154 aa17.1■□□□□ 0.33
HDDC2-204ENST00000608295 DSCC1Q9BVC3 393 aa17.1■□□□□ 0.33
HDDC2-204ENST00000608295 HOMER2Q9NSB8 354 aa17.1■□□□□ 0.33
HDDC2-204ENST00000608295 ZNF214Q9UL59 606 aaPredicted RBP17.1■□□□□ 0.33
HDDC2-204ENST00000608295 KDM4AO75164 1064 aa17.09■□□□□ 0.33
HDDC2-204ENST00000608295 TFRCP02786 760 aaKnown RBP17.09■□□□□ 0.33
HDDC2-204ENST00000608295 CCND3P30281 292 aaPredicted RBP17.09■□□□□ 0.33
HDDC2-204ENST00000608295 CYP2C19P33261 490 aa17.09■□□□□ 0.33
HDDC2-204ENST00000608295 IMMTQ16891 758 aaKnown RBP17.09■□□□□ 0.33
HDDC2-204ENST00000608295 REPS2Q8NFH8 660 aa17.09■□□□□ 0.33
HDDC2-204ENST00000608295 MKL1Q969V6 931 aa17.09■□□□□ 0.33
HDDC2-204ENST00000608295 MMP19Q99542 508 aa17.09■□□□□ 0.33
HDDC2-204ENST00000608295 HMX1Q9NP08 348 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms