RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 LRRC26Q2I0M4 334 aa28.49■■■□□ 2.15
LSM7-205ENST00000589532 GPATCH3Q96I76 525 aa28.49■■■□□ 2.15
LSM7-205ENST00000589532 FBXO28Q9NVF7 368 aa28.49■■■□□ 2.15
LSM7-205ENST00000589532 PCDHB15Q9Y5E8 787 aa28.49■■■□□ 2.15
LSM7-205ENST00000589532 LAMA2P24043 3122 aaKnown RBP28.49■■■□□ 2.15
LSM7-205ENST00000589532 RNF113AO15541 343 aaKnown RBP28.48■■■□□ 2.15
LSM7-205ENST00000589532 MSCO60682 206 aa28.48■■■□□ 2.15
LSM7-205ENST00000589532 REPS2Q8NFH8 660 aa28.48■■■□□ 2.15
LSM7-205ENST00000589532 PI4K2BQ8TCG2 481 aa28.48■■■□□ 2.15
LSM7-205ENST00000589532 M0R2C6 588 aa28.47■■■□□ 2.15
LSM7-205ENST00000589532 GPAA1O43292 621 aa28.47■■■□□ 2.15
LSM7-205ENST00000589532 SYN1P17600 705 aa28.47■■■□□ 2.15
LSM7-205ENST00000589532 ZNFX1Q9P2E3 1918 aaKnown RBP28.47■■■□□ 2.15
LSM7-205ENST00000589532 PLXNA1Q9UIW2 1896 aa28.46■■■□□ 2.15
LSM7-205ENST00000589532 TTC41PQ6P2S7 1318 aa28.46■■■□□ 2.15
LSM7-205ENST00000589532 ZFYP08048 801 aaPredicted RBP28.46■■■□□ 2.15
LSM7-205ENST00000589532 MAGEA10P43363 369 aaPredicted RBP28.46■■■□□ 2.15
LSM7-205ENST00000589532 DPP9Q86TI2 863 aa28.46■■■□□ 2.15
LSM7-205ENST00000589532 ZNF214Q9UL59 606 aaPredicted RBP28.46■■■□□ 2.15
LSM7-205ENST00000589532 PPP1R9AQ9ULJ8 1098 aa28.46■■■□□ 2.15
LSM7-205ENST00000589532 MYH4Q9Y623 1939 aa28.45■■■□□ 2.15
LSM7-205ENST00000589532 IGKV6D-41A0A0C4DH26 115 aa28.45■■■□□ 2.14
LSM7-205ENST00000589532 NCAPG2Q86XI2 1143 aa28.45■■■□□ 2.14
LSM7-205ENST00000589532 OTUD7AQ8TE49 926 aaPredicted RBP28.45■■■□□ 2.14
LSM7-205ENST00000589532 GOPCQ9HD26 462 aa28.45■■■□□ 2.14
LSM7-205ENST00000589532 SALL3Q9BXA9 1300 aa28.44■■■□□ 2.14
LSM7-205ENST00000589532 LTBP2Q14767 1821 aa28.44■■■□□ 2.14
LSM7-205ENST00000589532 DNM1LO00429 736 aa28.44■■■□□ 2.14
LSM7-205ENST00000589532 PLS1Q14651 629 aa28.44■■■□□ 2.14
LSM7-205ENST00000589532 FAM83BQ5T0W9 1011 aa28.44■■■□□ 2.14
LSM7-205ENST00000589532 RIOX2Q8IUF8 465 aa28.44■■■□□ 2.14
LSM7-205ENST00000589532 MAML3Q96JK9 1138 aa28.44■■■□□ 2.14
LSM7-205ENST00000589532 PLIN4Q96Q06 1357 aa28.43■■■□□ 2.14
LSM7-205ENST00000589532 VWA5AO00534 786 aa28.43■■■□□ 2.14
LSM7-205ENST00000589532 SLC25A27O95847 323 aa28.43■■■□□ 2.14
LSM7-205ENST00000589532 LRCH3Q96II8 777 aa28.43■■■□□ 2.14
LSM7-205ENST00000589532 NYAP2Q9P242 653 aa28.43■■■□□ 2.14
LSM7-205ENST00000589532 GNAT2P19087 354 aa28.42■■■□□ 2.14
LSM7-205ENST00000589532 CNGA1P29973 690 aa28.42■■■□□ 2.14
LSM7-205ENST00000589532 SEPT4O43236 478 aa28.41■■■□□ 2.14
LSM7-205ENST00000589532 MINDY4BA8MYZ0 360 aa28.4■■■□□ 2.14
LSM7-205ENST00000589532 FCER1AP12319 257 aa28.4■■■□□ 2.14
LSM7-205ENST00000589532 SEC62Q99442 399 aaKnown RBP28.4■■■□□ 2.14
LSM7-205ENST00000589532 NUP88Q99567 741 aaPredicted RBP28.4■■■□□ 2.14
LSM7-205ENST00000589532 SLC5A4Q9NY91 659 aa28.4■■■□□ 2.14
LSM7-205ENST00000589532 NDUFB10O96000 172 aa28.39■■■□□ 2.14
LSM7-205ENST00000589532 SAMD1Q6SPF0 538 aaPredicted RBP28.39■■■□□ 2.14
LSM7-205ENST00000589532 STK11IPQ8N1F8 1099 aa28.39■■■□□ 2.14
LSM7-205ENST00000589532 SENP6Q9GZR1 1112 aaPredicted RBP28.39■■■□□ 2.14
LSM7-205ENST00000589532 MKNK2Q9HBH9 465 aa28.39■■■□□ 2.14
LSM7-205ENST00000589532 F5H6K3 240 aa28.38■■■□□ 2.13
LSM7-205ENST00000589532 FOXP2O15409 715 aa28.38■■■□□ 2.13
LSM7-205ENST00000589532 STAT3P40763 770 aa28.38■■■□□ 2.13
LSM7-205ENST00000589532 TDO2P48775 406 aa28.38■■■□□ 2.13
LSM7-205ENST00000589532 KLRC3Q07444 240 aa28.38■■■□□ 2.13
LSM7-205ENST00000589532 ZNF792Q3KQV3 632 aa28.38■■■□□ 2.13
LSM7-205ENST00000589532 LRIT3Q3SXY7 679 aa28.38■■■□□ 2.13
LSM7-205ENST00000589532 IFNL3Q8IZI9 196 aa28.38■■■□□ 2.13
LSM7-205ENST00000589532 TDHQ8IZJ6 230 aa28.38■■■□□ 2.13
LSM7-205ENST00000589532 SLF1Q9BQI6 1058 aa28.38■■■□□ 2.13
LSM7-205ENST00000589532 ERC2O15083 957 aa28.37■■■□□ 2.13
LSM7-205ENST00000589532 PRDM1O75626 825 aa28.37■■■□□ 2.13
LSM7-205ENST00000589532 ZMYM1Q5SVZ6 1142 aa28.37■■■□□ 2.13
LSM7-205ENST00000589532 MMP19Q99542 508 aa28.37■■■□□ 2.13
LSM7-205ENST00000589532 NRBP1Q9UHY1 535 aa28.37■■■□□ 2.13
LSM7-205ENST00000589532 SYNPO2Q9UMS6 1093 aa28.37■■■□□ 2.13
LSM7-205ENST00000589532 PATL2C9JE40 543 aaKnown RBP28.36■■■□□ 2.13
LSM7-205ENST00000589532 PGK2P07205 417 aa28.36■■■□□ 2.13
LSM7-205ENST00000589532 MX1P20591 662 aa28.36■■■□□ 2.13
LSM7-205ENST00000589532 COPB2P35606 906 aa28.36■■■□□ 2.13
LSM7-205ENST00000589532 PRAMEF19Q5SWL8 479 aa28.36■■■□□ 2.13
LSM7-205ENST00000589532 GJC2Q5T442 439 aaPredicted RBP28.36■■■□□ 2.13
LSM7-205ENST00000589532 ANO1Q5XXA6 986 aa28.36■■■□□ 2.13
LSM7-205ENST00000589532 MKL1Q969V6 931 aa28.36■■■□□ 2.13
LSM7-205ENST00000589532 CEP95Q96GE4 821 aa28.36■■■□□ 2.13
LSM7-205ENST00000589532 DIS3Q9Y2L1 958 aaKnown RBP28.36■■■□□ 2.13
LSM7-205ENST00000589532 SNX17Q15036 470 aa28.35■■■□□ 2.13
LSM7-205ENST00000589532 LRRFIP1Q32MZ4 808 aaKnown RBP28.35■■■□□ 2.13
LSM7-205ENST00000589532 FAM47AQ5JRC9 791 aa28.35■■■□□ 2.13
LSM7-205ENST00000589532 EXOC6Q8TAG9 804 aa28.35■■■□□ 2.13
LSM7-205ENST00000589532 TEX13BQ9BXU2 312 aa28.35■■■□□ 2.13
LSM7-205ENST00000589532 MTMR4Q9NYA4 1195 aa28.35■■■□□ 2.13
LSM7-205ENST00000589532 ATP2A1O14983 1001 aa28.34■■■□□ 2.13
LSM7-205ENST00000589532 RAD21O60216 631 aa28.34■■■□□ 2.13
LSM7-205ENST00000589532 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.34■■■□□ 2.13
LSM7-205ENST00000589532 TINF2Q9BSI4 451 aa28.34■■■□□ 2.13
LSM7-205ENST00000589532 FSD1Q9BTV5 496 aa28.34■■■□□ 2.13
LSM7-205ENST00000589532 SMCHD1A6NHR9 2005 aa28.34■■■□□ 2.13
LSM7-205ENST00000589532 ATN1P54259 1190 aaPredicted RBP28.33■■■□□ 2.13
LSM7-205ENST00000589532 KCTD2Q14681 263 aa28.33■■■□□ 2.13
LSM7-205ENST00000589532 GPR153Q6NV75 609 aa28.33■■■□□ 2.13
LSM7-205ENST00000589532 ARRDC4Q8NCT1 418 aa28.33■■■□□ 2.13
LSM7-205ENST00000589532 UBE2OQ9C0C9 1292 aaKnown RBP28.33■■■□□ 2.13
LSM7-205ENST00000589532 CLIP2Q9UDT6 1046 aa28.33■■■□□ 2.13
LSM7-205ENST00000589532 RIPK3Q9Y572 518 aa28.33■■■□□ 2.13
LSM7-205ENST00000589532 RTP1P59025 263 aa28.32■■■□□ 2.12
LSM7-205ENST00000589532 LRRC41Q15345 812 aa28.32■■■□□ 2.12
LSM7-205ENST00000589532 SNRNP48Q6IEG0 339 aaKnown RBP28.32■■■□□ 2.12
LSM7-205ENST00000589532 GMCL1P1Q8NEA9 526 aa28.32■■■□□ 2.12
LSM7-205ENST00000589532 NEDD1Q8NHV4 660 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms