RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 MYL10Q9BUA6 226 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 ASCC2Q9H1I8 757 aaPredicted RBP17.1■□□□□ 0.33
CNN1-208ENST00000588935 R3HDMLQ9H3Y0 253 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 LY9Q9HBG7 655 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
CNN1-208ENST00000588935 WDR46O15213 610 aaKnown RBP17.09■□□□□ 0.33
CNN1-208ENST00000588935 GOLGA8HP0CJ92 632 aa17.09■□□□□ 0.33
CNN1-208ENST00000588935 BMP3P12645 472 aa17.09■□□□□ 0.33
CNN1-208ENST00000588935 IKQ13123 557 aaPredicted RBP17.09■□□□□ 0.33
CNN1-208ENST00000588935 PABPC4Q13310 644 aaKnown RBP eCLIP17.09■□□□□ 0.33
CNN1-208ENST00000588935 TTBK2Q6IQ55 1244 aa17.09■□□□□ 0.33
CNN1-208ENST00000588935 CATSPERGQ6ZRH7 1159 aa17.09■□□□□ 0.33
CNN1-208ENST00000588935 FBXO28Q9NVF7 368 aa17.09■□□□□ 0.33
CNN1-208ENST00000588935 LOC285556D6RIA3 1793 aa17.09■□□□□ 0.33
CNN1-208ENST00000588935 TMEM232C9JQI7 657 aa17.08■□□□□ 0.32
CNN1-208ENST00000588935 PEX10O60683 326 aa17.08■□□□□ 0.32
CNN1-208ENST00000588935 FLOT1O75955 427 aa17.08■□□□□ 0.32
CNN1-208ENST00000588935 RXRAP19793 462 aa17.08■□□□□ 0.32
CNN1-208ENST00000588935 SLC16A2P36021 539 aa17.08■□□□□ 0.32
CNN1-208ENST00000588935 APOBRQ0VD83 1088 aa17.08■□□□□ 0.32
CNN1-208ENST00000588935 CRHR2Q13324 411 aa17.08■□□□□ 0.32
CNN1-208ENST00000588935 NOL8Q76FK4 1167 aaKnown RBP17.08■□□□□ 0.32
CNN1-208ENST00000588935 CATIPQ7Z7H3 387 aa17.08■□□□□ 0.32
CNN1-208ENST00000588935 CCDC144CPQ8IYA2 1237 aa17.08■□□□□ 0.32
CNN1-208ENST00000588935 BRF1Q92994 677 aa17.08■□□□□ 0.32
CNN1-208ENST00000588935 TM6SF1Q9BZW5 370 aa17.08■□□□□ 0.32
CNN1-208ENST00000588935 ZFYVE28Q9HCC9 887 aa17.08■□□□□ 0.32
CNN1-208ENST00000588935 WBP1LQ9NX94 342 aa17.08■□□□□ 0.32
CNN1-208ENST00000588935 CPA4Q9UI42 421 aa17.08■□□□□ 0.32
CNN1-208ENST00000588935 ALDH1A1P00352 501 aa17.07■□□□□ 0.32
CNN1-208ENST00000588935 PDHBP11177 359 aa17.07■□□□□ 0.32
CNN1-208ENST00000588935 HOXA7P31268 230 aaPredicted RBP17.07■□□□□ 0.32
CNN1-208ENST00000588935 NEK4P51957 841 aa17.07■□□□□ 0.32
CNN1-208ENST00000588935 ZNF654Q8IZM8 581 aa17.07■□□□□ 0.32
CNN1-208ENST00000588935 TMTC2Q8N394 836 aa17.07■□□□□ 0.32
CNN1-208ENST00000588935 SMCR8Q8TEV9 937 aaPredicted RBP17.07■□□□□ 0.32
CNN1-208ENST00000588935 DCAF4Q8WV16 495 aa17.07■□□□□ 0.32
CNN1-208ENST00000588935 KIFC2Q96AC6 838 aa17.07■□□□□ 0.32
CNN1-208ENST00000588935 CPVLQ9H3G5 476 aa17.07■□□□□ 0.32
CNN1-208ENST00000588935 PNMA3Q9UL41 463 aa17.07■□□□□ 0.32
CNN1-208ENST00000588935 BRPF3Q9ULD4 1205 aa17.07■□□□□ 0.32
CNN1-208ENST00000588935 SLC12A7Q9Y666 1083 aa17.07■□□□□ 0.32
CNN1-208ENST00000588935 WDR19Q8NEZ3 1342 aa17.06■□□□□ 0.32
CNN1-208ENST00000588935 KLF18A0A0U1RQI7 1052 aa17.06■□□□□ 0.32
CNN1-208ENST00000588935 CA12O43570 354 aa17.06■□□□□ 0.32
CNN1-208ENST00000588935 LIFRP42702 1097 aa17.06■□□□□ 0.32
CNN1-208ENST00000588935 SLC4A3P48751 1232 aa17.06■□□□□ 0.32
CNN1-208ENST00000588935 RBM25P49756 843 aaKnown RBP17.06■□□□□ 0.32
CNN1-208ENST00000588935 SNAP25P60880 206 aa17.06■□□□□ 0.32
CNN1-208ENST00000588935 COG2Q14746 738 aa17.06■□□□□ 0.32
CNN1-208ENST00000588935 SYNE3Q6ZMZ3 975 aa17.06■□□□□ 0.32
CNN1-208ENST00000588935 JMYQ8N9B5 988 aa17.06■□□□□ 0.32
CNN1-208ENST00000588935 GMCL1Q96IK5 515 aa17.06■□□□□ 0.32
CNN1-208ENST00000588935 PARK7Q99497 189 aaKnown RBP17.06■□□□□ 0.32
CNN1-208ENST00000588935 MTA3Q9BTC8 594 aa17.06■□□□□ 0.32
CNN1-208ENST00000588935 PAGR1Q9BTK6 254 aa17.06■□□□□ 0.32
CNN1-208ENST00000588935 UBA5Q9GZZ9 404 aa17.06■□□□□ 0.32
CNN1-208ENST00000588935 SYNPO2Q9UMS6 1093 aa17.06■□□□□ 0.32
CNN1-208ENST00000588935 BAZ2BQ9UIF8 2168 aaKnown RBP17.06■□□□□ 0.32
CNN1-208ENST00000588935 PARP1P09874 1014 aaKnown RBP17.05■□□□□ 0.32
CNN1-208ENST00000588935 HERVK_113P62684 666 aa17.05■□□□□ 0.32
CNN1-208ENST00000588935 ZNF543Q08ER8 600 aa17.05■□□□□ 0.32
CNN1-208ENST00000588935 STAG2Q8N3U4 1231 aa17.05■□□□□ 0.32
CNN1-208ENST00000588935 ANKRD13CQ8N6S4 541 aa17.05■□□□□ 0.32
CNN1-208ENST00000588935 ATG4CQ96DT6 458 aa17.05■□□□□ 0.32
CNN1-208ENST00000588935 TBC1D32Q96NH3 1257 aa17.05■□□□□ 0.32
CNN1-208ENST00000588935 KIF2CQ99661 725 aa17.05■□□□□ 0.32
CNN1-208ENST00000588935 VAT1LQ9HCJ6 419 aa17.05■□□□□ 0.32
CNN1-208ENST00000588935 SLC45A1Q9Y2W3 748 aa17.05■□□□□ 0.32
CNN1-208ENST00000588935 THSD7BQ9C0I4 1608 aa17.05■□□□□ 0.32
CNN1-208ENST00000588935 DHX16O60231 1041 aaKnown RBP17.04■□□□□ 0.32
CNN1-208ENST00000588935 HSPA1AP0DMV8 641 aaKnown RBP17.04■□□□□ 0.32
CNN1-208ENST00000588935 HSPA1BP0DMV9 641 aaKnown RBP17.04■□□□□ 0.32
CNN1-208ENST00000588935 DSG3P32926 999 aa17.04■□□□□ 0.32
CNN1-208ENST00000588935 TOB2Q14106 344 aaPredicted RBP17.04■□□□□ 0.32
CNN1-208ENST00000588935 MICU3Q86XE3 530 aa17.04■□□□□ 0.32
CNN1-208ENST00000588935 CHURC1Q8WUH1 139 aa17.04■□□□□ 0.32
CNN1-208ENST00000588935 SLF1Q9BQI6 1058 aa17.04■□□□□ 0.32
CNN1-208ENST00000588935 ZCCHC17Q9NP64 241 aaKnown RBP17.04■□□□□ 0.32
CNN1-208ENST00000588935 HOXC10Q9NYD6 342 aa17.04■□□□□ 0.32
CNN1-208ENST00000588935 FEM1BQ9UK73 627 aa17.04■□□□□ 0.32
CNN1-208ENST00000588935 CTDP1Q9Y5B0 961 aaPredicted RBP17.04■□□□□ 0.32
CNN1-208ENST00000588935 SPDYE16A6NNV3 312 aaPredicted RBP17.03■□□□□ 0.32
CNN1-208ENST00000588935 TROAPQ12815 778 aa17.03■□□□□ 0.32
CNN1-208ENST00000588935 PLS1Q14651 629 aa17.03■□□□□ 0.32
CNN1-208ENST00000588935 GRM4Q14833 912 aa17.03■□□□□ 0.32
CNN1-208ENST00000588935 PIBF1Q8WXW3 757 aa17.03■□□□□ 0.32
CNN1-208ENST00000588935 PPP1R9AQ9ULJ8 1098 aa17.03■□□□□ 0.32
CNN1-208ENST00000588935 KLRF2D3W0D1 207 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 FOXN1O15353 648 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 ZBTB43O43298 467 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 TLR2O60603 784 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 SNHG28P0DPA3 235 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 STAT2P52630 851 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 AK2P54819 239 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 STK3Q13188 491 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 CCDC174Q6PII3 467 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 APOA5Q6Q788 366 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 POTEEQ6S8J3 1075 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 FAM160B2Q86V87 743 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms