RNA–Protein interactions for RNA: ENST00000587832.5

GCDH-206, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 791 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-206ENST00000587832 ZFYP08048 801 aaPredicted RBP20.59■□□□□ 0.89
GCDH-206ENST00000587832 CNGA1P29973 690 aa20.59■□□□□ 0.89
GCDH-206ENST00000587832 TMEM132BQ14DG7 1078 aa20.59■□□□□ 0.89
GCDH-206ENST00000587832 GPR153Q6NV75 609 aa20.59■□□□□ 0.89
GCDH-206ENST00000587832 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.59■□□□□ 0.89
GCDH-206ENST00000587832 FCER1AP12319 257 aa20.58■□□□□ 0.89
GCDH-206ENST00000587832 PLS1Q14651 629 aa20.58■□□□□ 0.89
GCDH-206ENST00000587832 LRIT3Q3SXY7 679 aa20.58■□□□□ 0.89
GCDH-206ENST00000587832 NCAPG2Q86XI2 1143 aa20.58■□□□□ 0.89
GCDH-206ENST00000587832 RNF113AO15541 343 aaKnown RBP20.57■□□□□ 0.88
GCDH-206ENST00000587832 SEPT4O43236 478 aa20.57■□□□□ 0.88
GCDH-206ENST00000587832 GNAT2P19087 354 aa20.57■□□□□ 0.88
GCDH-206ENST00000587832 RASA1P20936 1047 aa20.57■□□□□ 0.88
GCDH-206ENST00000587832 COPB2P35606 906 aa20.57■□□□□ 0.88
GCDH-206ENST00000587832 RIOX2Q8IUF8 465 aa20.57■□□□□ 0.88
GCDH-206ENST00000587832 TDHQ8IZJ6 230 aa20.57■□□□□ 0.88
GCDH-206ENST00000587832 OSBP2Q969R2 916 aa20.57■□□□□ 0.88
GCDH-206ENST00000587832 MAML3Q96JK9 1138 aa20.57■□□□□ 0.88
GCDH-206ENST00000587832 PPP1R9AQ9ULJ8 1098 aa20.57■□□□□ 0.88
GCDH-206ENST00000587832 TTC41PQ6P2S7 1318 aa20.56■□□□□ 0.88
GCDH-206ENST00000587832 VWA5AO00534 786 aa20.56■□□□□ 0.88
GCDH-206ENST00000587832 ARRDC4Q8NCT1 418 aa20.56■□□□□ 0.88
GCDH-206ENST00000587832 LRCH3Q96II8 777 aa20.56■□□□□ 0.88
GCDH-206ENST00000587832 SENP6Q9GZR1 1112 aaPredicted RBP20.56■□□□□ 0.88
GCDH-206ENST00000587832 FBXO28Q9NVF7 368 aa20.56■□□□□ 0.88
GCDH-206ENST00000587832 NYAP2Q9P242 653 aa20.56■□□□□ 0.88
GCDH-206ENST00000587832 NRBP1Q9UHY1 535 aa20.56■□□□□ 0.88
GCDH-206ENST00000587832 ZNF214Q9UL59 606 aaPredicted RBP20.56■□□□□ 0.88
GCDH-206ENST00000587832 SMCHD1A6NHR9 2005 aa20.56■□□□□ 0.88
GCDH-206ENST00000587832 GPAA1O43292 621 aa20.55■□□□□ 0.88
GCDH-206ENST00000587832 LRRFIP1Q32MZ4 808 aaKnown RBP20.55■□□□□ 0.88
GCDH-206ENST00000587832 REPS2Q8NFH8 660 aa20.55■□□□□ 0.88
GCDH-206ENST00000587832 UBE2OQ9C0C9 1292 aaKnown RBP20.55■□□□□ 0.88
GCDH-206ENST00000587832 EPB41L4AQ9HCS5 686 aaPredicted RBP20.55■□□□□ 0.88
GCDH-206ENST00000587832 DIS3Q9Y2L1 958 aaKnown RBP20.55■□□□□ 0.88
GCDH-206ENST00000587832 DNAH12Q6ZR08 3092 aa20.54■□□□□ 0.88
GCDH-206ENST00000587832 FAM83BQ5T0W9 1011 aa20.54■□□□□ 0.88
GCDH-206ENST00000587832 TSHZ3Q63HK5 1081 aa20.54■□□□□ 0.88
GCDH-206ENST00000587832 MKNK2Q9HBH9 465 aa20.54■□□□□ 0.88
GCDH-206ENST00000587832 ZNF287Q9HBT7 754 aa20.54■□□□□ 0.88
GCDH-206ENST00000587832 SYNPO2Q9UMS6 1093 aa20.54■□□□□ 0.88
GCDH-206ENST00000587832 PLIN4Q96Q06 1357 aa20.54■□□□□ 0.88
GCDH-206ENST00000587832 IGKV6D-41A0A0C4DH26 115 aa20.53■□□□□ 0.88
GCDH-206ENST00000587832 STAT3P40763 770 aa20.53■□□□□ 0.88
GCDH-206ENST00000587832 MMP19Q99542 508 aa20.53■□□□□ 0.88
GCDH-206ENST00000587832 MINDY4BA8MYZ0 360 aa20.52■□□□□ 0.88
GCDH-206ENST00000587832 KBTBD13C9JR72 458 aa20.52■□□□□ 0.88
GCDH-206ENST00000587832 ERC2O15083 957 aa20.52■□□□□ 0.88
GCDH-206ENST00000587832 KCTD2Q14681 263 aa20.52■□□□□ 0.88
GCDH-206ENST00000587832 SNX17Q15036 470 aa20.52■□□□□ 0.88
GCDH-206ENST00000587832 SAMD1Q6SPF0 538 aaPredicted RBP20.52■□□□□ 0.88
GCDH-206ENST00000587832 PI4K2BQ8TCG2 481 aa20.52■□□□□ 0.88
GCDH-206ENST00000587832 SLF1Q9BQI6 1058 aa20.52■□□□□ 0.88
GCDH-206ENST00000587832 F5H6K3 240 aa20.51■□□□□ 0.87
GCDH-206ENST00000587832 M0R2C6 588 aa20.51■□□□□ 0.87
GCDH-206ENST00000587832 NDUFB10O96000 172 aa20.51■□□□□ 0.87
GCDH-206ENST00000587832 TDO2P48775 406 aa20.51■□□□□ 0.87
GCDH-206ENST00000587832 KLRC3Q07444 240 aa20.51■□□□□ 0.87
GCDH-206ENST00000587832 ZNF792Q3KQV3 632 aa20.51■□□□□ 0.87
GCDH-206ENST00000587832 GJC2Q5T442 439 aaPredicted RBP20.51■□□□□ 0.87
GCDH-206ENST00000587832 TEX13BQ9BXU2 312 aa20.51■□□□□ 0.87
GCDH-206ENST00000587832 PATL2C9JE40 543 aaKnown RBP20.5■□□□□ 0.87
GCDH-206ENST00000587832 ATP2A1O14983 1001 aa20.5■□□□□ 0.87
GCDH-206ENST00000587832 RAD21O60216 631 aa20.5■□□□□ 0.87
GCDH-206ENST00000587832 ATN1P54259 1190 aaPredicted RBP20.5■□□□□ 0.87
GCDH-206ENST00000587832 RTP1P59025 263 aa20.5■□□□□ 0.87
GCDH-206ENST00000587832 C1orf53Q5VUE5 145 aa20.5■□□□□ 0.87
GCDH-206ENST00000587832 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.5■□□□□ 0.87
GCDH-206ENST00000587832 PRPF38AQ8NAV1 312 aaKnown RBP20.5■□□□□ 0.87
GCDH-206ENST00000587832 MKL1Q969V6 931 aa20.5■□□□□ 0.87
GCDH-206ENST00000587832 TINF2Q9BSI4 451 aa20.5■□□□□ 0.87
GCDH-206ENST00000587832 PCDHB15Q9Y5E8 787 aa20.5■□□□□ 0.87
GCDH-206ENST00000587832 PGK2P07205 417 aa20.49■□□□□ 0.87
GCDH-206ENST00000587832 LRRC41Q15345 812 aa20.49■□□□□ 0.87
GCDH-206ENST00000587832 FAM47AQ5JRC9 791 aa20.49■□□□□ 0.87
GCDH-206ENST00000587832 PRAMEF19Q5SWL8 479 aa20.49■□□□□ 0.87
GCDH-206ENST00000587832 SLC39A5Q6ZMH5 540 aa20.49■□□□□ 0.87
GCDH-206ENST00000587832 IFNL3Q8IZI9 196 aa20.49■□□□□ 0.87
GCDH-206ENST00000587832 MSL3Q8N5Y2 521 aaKnown RBP20.49■□□□□ 0.87
GCDH-206ENST00000587832 NUP88Q99567 741 aaPredicted RBP20.49■□□□□ 0.87
GCDH-206ENST00000587832 NACAP1Q9BZK3 213 aa20.49■□□□□ 0.87
GCDH-206ENST00000587832 MTMR4Q9NYA4 1195 aa20.49■□□□□ 0.87
GCDH-206ENST00000587832 MCM3APO60318 1980 aa20.48■□□□□ 0.87
GCDH-206ENST00000587832 APPP05067 770 aa20.48■□□□□ 0.87
GCDH-206ENST00000587832 MDM2Q00987 491 aaPredicted RBP20.48■□□□□ 0.87
GCDH-206ENST00000587832 ANO1Q5XXA6 986 aa20.48■□□□□ 0.87
GCDH-206ENST00000587832 ZNF444Q8N0Y2 327 aaPredicted RBP20.48■□□□□ 0.87
GCDH-206ENST00000587832 GMCL1P1Q8NEA9 526 aa20.48■□□□□ 0.87
GCDH-206ENST00000587832 CEP95Q96GE4 821 aa20.48■□□□□ 0.87
GCDH-206ENST00000587832 LBHD1Q9BQE6 289 aaPredicted RBP20.48■□□□□ 0.87
GCDH-206ENST00000587832 CLIP2Q9UDT6 1046 aa20.48■□□□□ 0.87
GCDH-206ENST00000587832 PRKAG2Q9UGJ0 569 aa20.48■□□□□ 0.87
GCDH-206ENST00000587832 SALL3Q9BXA9 1300 aa20.48■□□□□ 0.87
GCDH-206ENST00000587832 DNAJC25-GNG10A0A024R161 153 aa20.47■□□□□ 0.87
GCDH-206ENST00000587832 TTLL1O95922 423 aa20.47■□□□□ 0.87
GCDH-206ENST00000587832 RARBP10826 455 aa20.47■□□□□ 0.87
GCDH-206ENST00000587832 MX1P20591 662 aa20.47■□□□□ 0.87
GCDH-206ENST00000587832 ZMYM1Q5SVZ6 1142 aa20.47■□□□□ 0.87
GCDH-206ENST00000587832 SNRNP48Q6IEG0 339 aaKnown RBP20.47■□□□□ 0.87
GCDH-206ENST00000587832 STK11IPQ8N1F8 1099 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms