RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 PTPROQ16827 1216 aa13.41□□□□□ -0.26
ERBB2-218ENST00000584450 SPATA1Q5VX52 437 aa13.41□□□□□ -0.26
ERBB2-218ENST00000584450 SV2BQ7L1I2 683 aa13.41□□□□□ -0.26
ERBB2-218ENST00000584450 LRP10Q7Z4F1 713 aa13.41□□□□□ -0.26
ERBB2-218ENST00000584450 REXO1Q8N1G1 1221 aaKnown RBP13.41□□□□□ -0.26
ERBB2-218ENST00000584450 STAG2Q8N3U4 1231 aa13.41□□□□□ -0.26
ERBB2-218ENST00000584450 FEZ1Q99689 392 aa13.41□□□□□ -0.26
ERBB2-218ENST00000584450 SAMM50Q9Y512 469 aa13.41□□□□□ -0.26
ERBB2-218ENST00000584450 NRXN3Q9Y4C0 1643 aa13.41□□□□□ -0.26
ERBB2-218ENST00000584450 TMCO5BA8MYB1 307 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 IKBKBO14920 756 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 SLFN14P0C7P3 912 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 PLCG2P16885 1265 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 CYLC1P35663 651 aaPredicted RBP13.4□□□□□ -0.26
ERBB2-218ENST00000584450 RBM26Q5T8P6 1007 aaKnown RBP13.4□□□□□ -0.26
ERBB2-218ENST00000584450 SGMS1Q86VZ5 419 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 ANKRD13CQ8N6S4 541 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 PAGE5Q96GU1 130 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 TIGD1Q96MW7 591 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 IRX2Q9BZI1 471 aaPredicted RBP13.4□□□□□ -0.26
ERBB2-218ENST00000584450 NLRC4Q9NPP4 1024 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 SPTLC3Q9NUV7 552 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 USP40Q9NVE5 1235 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 RFX7Q2KHR2 1363 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 MST1RQ04912 1400 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 SEC31AO94979 1220 aaKnown RBP13.4□□□□□ -0.26
ERBB2-218ENST00000584450 CACNB3P54284 484 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 KIF5AQ12840 1032 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 SARM1Q6SZW1 724 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 SPAG5Q96R06 1193 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 ENC1O14682 589 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 CHMP2AO43633 222 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 RPN1P04843 607 aaKnown RBP13.4□□□□□ -0.26
ERBB2-218ENST00000584450 CDC25BP30305 580 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 ACRBPQ8NEB7 543 aa13.4□□□□□ -0.26
ERBB2-218ENST00000584450 RBM17Q96I25 401 aaKnown RBP13.4□□□□□ -0.26
ERBB2-218ENST00000584450 PAFAH1B1P43034 410 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 CUL4BQ13620 913 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 ADGRA1Q86SQ6 560 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 FAM114A1Q8IWE2 563 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 LUC7LQ9NQ29 371 aaKnown RBP13.39□□□□□ -0.27
ERBB2-218ENST00000584450 MON2Q7Z3U7 1717 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 FAM196BA6NMK8 535 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 CHMP4BP1P59074 171 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 CACNB1Q02641 598 aaPredicted RBP13.39□□□□□ -0.27
ERBB2-218ENST00000584450 FMR1Q06787 632 aaKnown RBP eCLIP13.39□□□□□ -0.27
ERBB2-218ENST00000584450 MTF1Q14872 753 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 C3orf67Q6ZVT6 689 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 ARHGEF1Q92888 912 aaKnown RBP13.39□□□□□ -0.27
ERBB2-218ENST00000584450 ZBTB21Q9ULJ3 1066 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 PIK3C2AO00443 1686 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 TRIM49BA6NDI0 452 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 TRIM37O94972 964 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 PRPF4BQ13523 1007 aaKnown RBP13.39□□□□□ -0.27
ERBB2-218ENST00000584450 LRRC41Q15345 812 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 CALCRLQ16602 461 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 VSTM4Q8IW00 320 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 DHX37Q8IY37 1157 aaKnown RBP13.39□□□□□ -0.27
ERBB2-218ENST00000584450 SRBD1Q8N5C6 995 aaKnown RBP13.39□□□□□ -0.27
ERBB2-218ENST00000584450 PIGSQ96S52 555 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 POLD4Q9HCU8 107 aa13.39□□□□□ -0.27
ERBB2-218ENST00000584450 OVOS2A0A0G2JMS6 1433 aa13.38□□□□□ -0.27
ERBB2-218ENST00000584450 PRPF3O43395 683 aaKnown RBP13.38□□□□□ -0.27
ERBB2-218ENST00000584450 FGFR1OPO95684 399 aaKnown RBP13.38□□□□□ -0.27
ERBB2-218ENST00000584450 SLC1A4P43007 532 aa13.38□□□□□ -0.27
ERBB2-218ENST00000584450 DNAJC21Q5F1R6 531 aaKnown RBP13.38□□□□□ -0.27
ERBB2-218ENST00000584450 TMTC3Q6ZXV5 915 aa13.38□□□□□ -0.27
ERBB2-218ENST00000584450 MAEAQ7L5Y9 396 aa13.38□□□□□ -0.27
ERBB2-218ENST00000584450 CLEC10AQ8IUN9 316 aa13.38□□□□□ -0.27
ERBB2-218ENST00000584450 TAF4BQ92750 862 aa13.38□□□□□ -0.27
ERBB2-218ENST00000584450 CUL5Q93034 780 aa13.38□□□□□ -0.27
ERBB2-218ENST00000584450 HERC4Q5GLZ8 1057 aaPredicted RBP13.38□□□□□ -0.27
ERBB2-218ENST00000584450 INTS5Q6P9B9 1019 aaKnown RBP13.38□□□□□ -0.27
ERBB2-218ENST00000584450 KRT86O43790 486 aa13.38□□□□□ -0.27
ERBB2-218ENST00000584450 DDAH1O94760 285 aa13.38□□□□□ -0.27
ERBB2-218ENST00000584450 HLTFQ14527 1009 aaKnown RBP eCLIP13.38□□□□□ -0.27
ERBB2-218ENST00000584450 ALX1Q15699 326 aa13.38□□□□□ -0.27
ERBB2-218ENST00000584450 TOGARAM2Q6ZUX3 1019 aa13.38□□□□□ -0.27
ERBB2-218ENST00000584450 KCTD1Q719H9 257 aa13.38□□□□□ -0.27
ERBB2-218ENST00000584450 TXNRD3Q86VQ6 643 aa13.38□□□□□ -0.27
ERBB2-218ENST00000584450 SYCP1Q15431 976 aa13.37□□□□□ -0.27
ERBB2-218ENST00000584450 DCAF17Q5H9S7 520 aaPredicted RBP13.37□□□□□ -0.27
ERBB2-218ENST00000584450 FBXO38Q6PIJ6 1188 aa13.37□□□□□ -0.27
ERBB2-218ENST00000584450 RABEP2Q9H5N1 569 aa13.37□□□□□ -0.27
ERBB2-218ENST00000584450 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.37□□□□□ -0.27
ERBB2-218ENST00000584450 SPDYE3A6NKU9 549 aa13.37□□□□□ -0.27
ERBB2-218ENST00000584450 B4DLN1 442 aa13.37□□□□□ -0.27
ERBB2-218ENST00000584450 NTSR2O95665 410 aa13.37□□□□□ -0.27
ERBB2-218ENST00000584450 SERPINB2P05120 415 aa13.37□□□□□ -0.27
ERBB2-218ENST00000584450 CCZ1BP86790 482 aa13.37□□□□□ -0.27
ERBB2-218ENST00000584450 CCZ1P86791 482 aaPredicted RBP13.37□□□□□ -0.27
ERBB2-218ENST00000584450 NFIXQ14938 502 aa13.37□□□□□ -0.27
ERBB2-218ENST00000584450 E4F1Q66K89 784 aaPredicted RBP13.37□□□□□ -0.27
ERBB2-218ENST00000584450 TYW1BQ6NUM6 668 aa13.37□□□□□ -0.27
ERBB2-218ENST00000584450 ADCY7P51828 1080 aa13.37□□□□□ -0.27
ERBB2-218ENST00000584450 MRPL12P52815 198 aaKnown RBP13.37□□□□□ -0.27
ERBB2-218ENST00000584450 SPICE1Q8N0Z3 855 aa13.37□□□□□ -0.27
ERBB2-218ENST00000584450 LINC00116Q8NCU8 138 aa13.37□□□□□ -0.27
ERBB2-218ENST00000584450 ENOX1Q8TC92 643 aaKnown RBP13.37□□□□□ -0.27
ERBB2-218ENST00000584450 DBNDD1Q9H9R9 158 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms