RNA–Protein interactions for RNA: ENST00000583213.1

TNFAIP1-206, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-206ENST00000583213 REPS2Q8NFH8 660 aa19.32■□□□□ 0.68
TNFAIP1-206ENST00000583213 LTBP2Q14767 1821 aa19.31■□□□□ 0.68
TNFAIP1-206ENST00000583213 GSG1L2A8MUP6 293 aa19.31■□□□□ 0.68
TNFAIP1-206ENST00000583213 APPBP2Q92624 585 aa19.31■□□□□ 0.68
TNFAIP1-206ENST00000583213 BCL11AQ9H165 835 aa19.31■□□□□ 0.68
TNFAIP1-206ENST00000583213 SLC5A4Q9NY91 659 aa19.31■□□□□ 0.68
TNFAIP1-206ENST00000583213 NRBP1Q9UHY1 535 aa19.31■□□□□ 0.68
TNFAIP1-206ENST00000583213 ZNF214Q9UL59 606 aaPredicted RBP19.31■□□□□ 0.68
TNFAIP1-206ENST00000583213 PPP1R9AQ9ULJ8 1098 aa19.31■□□□□ 0.68
TNFAIP1-206ENST00000583213 VWA5AO00534 786 aa19.3■□□□□ 0.68
TNFAIP1-206ENST00000583213 RASA1P20936 1047 aa19.3■□□□□ 0.68
TNFAIP1-206ENST00000583213 SNX17Q15036 470 aa19.3■□□□□ 0.68
TNFAIP1-206ENST00000583213 RIOX2Q8IUF8 465 aa19.3■□□□□ 0.68
TNFAIP1-206ENST00000583213 OSBP2Q969R2 916 aa19.3■□□□□ 0.68
TNFAIP1-206ENST00000583213 MAML3Q96JK9 1138 aa19.3■□□□□ 0.68
TNFAIP1-206ENST00000583213 SENP6Q9GZR1 1112 aaPredicted RBP19.3■□□□□ 0.68
TNFAIP1-206ENST00000583213 GOPCQ9HD26 462 aa19.3■□□□□ 0.68
TNFAIP1-206ENST00000583213 FBXO28Q9NVF7 368 aa19.3■□□□□ 0.68
TNFAIP1-206ENST00000583213 LAMA2P24043 3122 aaKnown RBP19.3■□□□□ 0.68
TNFAIP1-206ENST00000583213 PLXNA1Q9UIW2 1896 aa19.29■□□□□ 0.68
TNFAIP1-206ENST00000583213 FCER1AP12319 257 aa19.29■□□□□ 0.68
TNFAIP1-206ENST00000583213 CNGA1P29973 690 aa19.29■□□□□ 0.68
TNFAIP1-206ENST00000583213 NCAPG2Q86XI2 1143 aa19.29■□□□□ 0.68
TNFAIP1-206ENST00000583213 UBE2OQ9C0C9 1292 aaKnown RBP19.29■□□□□ 0.68
TNFAIP1-206ENST00000583213 NYAP2Q9P242 653 aa19.29■□□□□ 0.68
TNFAIP1-206ENST00000583213 DIS3Q9Y2L1 958 aaKnown RBP19.29■□□□□ 0.68
TNFAIP1-206ENST00000583213 IGKV6D-41A0A0C4DH26 115 aa19.28■□□□□ 0.68
TNFAIP1-206ENST00000583213 ZFYP08048 801 aaPredicted RBP19.28■□□□□ 0.68
TNFAIP1-206ENST00000583213 COPB2P35606 906 aa19.28■□□□□ 0.68
TNFAIP1-206ENST00000583213 PLS1Q14651 629 aa19.28■□□□□ 0.68
TNFAIP1-206ENST00000583213 ARRDC4Q8NCT1 418 aa19.28■□□□□ 0.68
TNFAIP1-206ENST00000583213 GPATCH3Q96I76 525 aa19.28■□□□□ 0.68
TNFAIP1-206ENST00000583213 EPB41L4AQ9HCS5 686 aaPredicted RBP19.28■□□□□ 0.68
TNFAIP1-206ENST00000583213 RNF113AO15541 343 aaKnown RBP19.27■□□□□ 0.68
TNFAIP1-206ENST00000583213 FAM83BQ5T0W9 1011 aa19.27■□□□□ 0.68
TNFAIP1-206ENST00000583213 C1orf53Q5VUE5 145 aa19.27■□□□□ 0.68
TNFAIP1-206ENST00000583213 SYNPO2Q9UMS6 1093 aa19.27■□□□□ 0.68
TNFAIP1-206ENST00000583213 PLIN4Q96Q06 1357 aa19.27■□□□□ 0.68
TNFAIP1-206ENST00000583213 SMCHD1A6NHR9 2005 aa19.26■□□□□ 0.67
TNFAIP1-206ENST00000583213 ATP2A1O14983 1001 aa19.26■□□□□ 0.67
TNFAIP1-206ENST00000583213 GPAA1O43292 621 aa19.26■□□□□ 0.67
TNFAIP1-206ENST00000583213 GNAT2P19087 354 aa19.26■□□□□ 0.67
TNFAIP1-206ENST00000583213 STAT3P40763 770 aa19.26■□□□□ 0.67
TNFAIP1-206ENST00000583213 ZNF792Q3KQV3 632 aa19.26■□□□□ 0.67
TNFAIP1-206ENST00000583213 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.26■□□□□ 0.67
TNFAIP1-206ENST00000583213 MMP19Q99542 508 aa19.26■□□□□ 0.67
TNFAIP1-206ENST00000583213 A0A0C4DFX4 3053 aa19.26■□□□□ 0.67
TNFAIP1-206ENST00000583213 TTC41PQ6P2S7 1318 aa19.25■□□□□ 0.67
TNFAIP1-206ENST00000583213 MYH4Q9Y623 1939 aa19.25■□□□□ 0.67
TNFAIP1-206ENST00000583213 RTP1P59025 263 aa19.25■□□□□ 0.67
TNFAIP1-206ENST00000583213 GJC2Q5T442 439 aaPredicted RBP19.25■□□□□ 0.67
TNFAIP1-206ENST00000583213 TSHZ3Q63HK5 1081 aa19.25■□□□□ 0.67
TNFAIP1-206ENST00000583213 MKL1Q969V6 931 aa19.25■□□□□ 0.67
TNFAIP1-206ENST00000583213 KBTBD13C9JR72 458 aa19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 F5H6K3 240 aa19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 NDUFB10O96000 172 aa19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 ATN1P54259 1190 aaPredicted RBP19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 MDM2Q00987 491 aaPredicted RBP19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 KLRC3Q07444 240 aa19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 KCTD2Q14681 263 aa19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 LRRC41Q15345 812 aa19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 PRAMEF19Q5SWL8 479 aa19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 SLC39A5Q6ZMH5 540 aa19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 MSL3Q8N5Y2 521 aaKnown RBP19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 PI4K2BQ8TCG2 481 aa19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 SLF1Q9BQI6 1058 aa19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 TINF2Q9BSI4 451 aa19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 TEX13BQ9BXU2 312 aa19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 CUL9Q8IWT3 2517 aa19.24■□□□□ 0.67
TNFAIP1-206ENST00000583213 M0R2C6 588 aa19.23■□□□□ 0.67
TNFAIP1-206ENST00000583213 FAM47AQ5JRC9 791 aa19.23■□□□□ 0.67
TNFAIP1-206ENST00000583213 DEFB123Q8N688 67 aa19.23■□□□□ 0.67
TNFAIP1-206ENST00000583213 MKNK2Q9HBH9 465 aa19.23■□□□□ 0.67
TNFAIP1-206ENST00000583213 PHF24Q9UPV7 400 aa19.23■□□□□ 0.67
TNFAIP1-206ENST00000583213 DNAJC25-GNG10A0A024R161 153 aa19.22■□□□□ 0.67
TNFAIP1-206ENST00000583213 MINDY4BA8MYZ0 360 aa19.22■□□□□ 0.67
TNFAIP1-206ENST00000583213 PATL2C9JE40 543 aaKnown RBP19.22■□□□□ 0.67
TNFAIP1-206ENST00000583213 PGK2P07205 417 aa19.22■□□□□ 0.67
TNFAIP1-206ENST00000583213 ZNF865P0CJ78 1059 aaPredicted RBP19.22■□□□□ 0.67
TNFAIP1-206ENST00000583213 LRRFIP1Q32MZ4 808 aaKnown RBP19.22■□□□□ 0.67
TNFAIP1-206ENST00000583213 ANO1Q5XXA6 986 aa19.22■□□□□ 0.67
TNFAIP1-206ENST00000583213 PRPF38AQ8NAV1 312 aaKnown RBP19.22■□□□□ 0.67
TNFAIP1-206ENST00000583213 GMCL1P1Q8NEA9 526 aa19.22■□□□□ 0.67
TNFAIP1-206ENST00000583213 NUP88Q99567 741 aaPredicted RBP19.22■□□□□ 0.67
TNFAIP1-206ENST00000583213 ZNF287Q9HBT7 754 aa19.22■□□□□ 0.67
TNFAIP1-206ENST00000583213 MTMR10Q9NXD2 777 aa19.22■□□□□ 0.67
TNFAIP1-206ENST00000583213 MTMR4Q9NYA4 1195 aa19.22■□□□□ 0.67
TNFAIP1-206ENST00000583213 PCDHB15Q9Y5E8 787 aa19.22■□□□□ 0.67
TNFAIP1-206ENST00000583213 FAM109BQ6ICB4 259 aaPredicted RBP19.21■□□□□ 0.67
TNFAIP1-206ENST00000583213 SAMD1Q6SPF0 538 aaPredicted RBP19.21■□□□□ 0.67
TNFAIP1-206ENST00000583213 MAMDC4Q6UXC1 1216 aa19.21■□□□□ 0.67
TNFAIP1-206ENST00000583213 IFNL3Q8IZI9 196 aa19.21■□□□□ 0.67
TNFAIP1-206ENST00000583213 CEP95Q96GE4 821 aa19.21■□□□□ 0.67
TNFAIP1-206ENST00000583213 LBHD1Q9BQE6 289 aaPredicted RBP19.21■□□□□ 0.67
TNFAIP1-206ENST00000583213 SYNGAP1Q96PV0 1343 aa19.21■□□□□ 0.67
TNFAIP1-206ENST00000583213 SALL3Q9BXA9 1300 aa19.21■□□□□ 0.67
TNFAIP1-206ENST00000583213 POTEB2H3BUK9 544 aa19.2■□□□□ 0.66
TNFAIP1-206ENST00000583213 ERC2O15083 957 aa19.2■□□□□ 0.66
TNFAIP1-206ENST00000583213 RARBP10826 455 aa19.2■□□□□ 0.66
TNFAIP1-206ENST00000583213 TDO2P48775 406 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms