RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 ADAMTS5Q9UNA0 930 aa17.35■□□□□ 0.37
ITGB4-208ENST00000582629 SEPT4O43236 478 aa17.34■□□□□ 0.37
ITGB4-208ENST00000582629 FCER1AP12319 257 aa17.34■□□□□ 0.37
ITGB4-208ENST00000582629 SBK1Q52WX2 424 aa17.34■□□□□ 0.37
ITGB4-208ENST00000582629 GIMAP6Q6P9H5 292 aa17.34■□□□□ 0.37
ITGB4-208ENST00000582629 KBTBD3Q8NAB2 608 aa17.34■□□□□ 0.37
ITGB4-208ENST00000582629 STRBPQ96SI9 672 aaKnown RBP17.34■□□□□ 0.37
ITGB4-208ENST00000582629 DCTPP1Q9H773 170 aa17.34■□□□□ 0.37
ITGB4-208ENST00000582629 PLXNA1Q9UIW2 1896 aa17.34■□□□□ 0.37
ITGB4-208ENST00000582629 ROBO3Q96MS0 1386 aa17.33■□□□□ 0.36
ITGB4-208ENST00000582629 ATN1P54259 1190 aaPredicted RBP17.33■□□□□ 0.36
ITGB4-208ENST00000582629 MDM2Q00987 491 aaPredicted RBP17.33■□□□□ 0.36
ITGB4-208ENST00000582629 RIOX2Q8IUF8 465 aa17.33■□□□□ 0.36
ITGB4-208ENST00000582629 APPBP2Q92624 585 aa17.33■□□□□ 0.36
ITGB4-208ENST00000582629 MAML3Q96JK9 1138 aa17.33■□□□□ 0.36
ITGB4-208ENST00000582629 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.33■□□□□ 0.36
ITGB4-208ENST00000582629 FBXO28Q9NVF7 368 aa17.33■□□□□ 0.36
ITGB4-208ENST00000582629 PPP1R9AQ9ULJ8 1098 aa17.33■□□□□ 0.36
ITGB4-208ENST00000582629 KBTBD13C9JR72 458 aa17.32■□□□□ 0.36
ITGB4-208ENST00000582629 VWA5AO00534 786 aa17.32■□□□□ 0.36
ITGB4-208ENST00000582629 RNF113AO15541 343 aaKnown RBP17.32■□□□□ 0.36
ITGB4-208ENST00000582629 RAD21O60216 631 aa17.32■□□□□ 0.36
ITGB4-208ENST00000582629 COPB2P35606 906 aa17.32■□□□□ 0.36
ITGB4-208ENST00000582629 FAM83BQ5T0W9 1011 aa17.32■□□□□ 0.36
ITGB4-208ENST00000582629 GJC2Q5T442 439 aaPredicted RBP17.32■□□□□ 0.36
ITGB4-208ENST00000582629 ANO1Q5XXA6 986 aa17.32■□□□□ 0.36
ITGB4-208ENST00000582629 MMP19Q99542 508 aa17.32■□□□□ 0.36
ITGB4-208ENST00000582629 NRBP1Q9UHY1 535 aa17.32■□□□□ 0.36
ITGB4-208ENST00000582629 MYH4Q9Y623 1939 aa17.31■□□□□ 0.36
ITGB4-208ENST00000582629 GSG1L2A8MUP6 293 aa17.31■□□□□ 0.36
ITGB4-208ENST00000582629 MINDY4BA8MYZ0 360 aa17.31■□□□□ 0.36
ITGB4-208ENST00000582629 ZFYP08048 801 aaPredicted RBP17.31■□□□□ 0.36
ITGB4-208ENST00000582629 RASA1P20936 1047 aa17.31■□□□□ 0.36
ITGB4-208ENST00000582629 STAT3P40763 770 aa17.31■□□□□ 0.36
ITGB4-208ENST00000582629 RTP1P59025 263 aa17.31■□□□□ 0.36
ITGB4-208ENST00000582629 KCTD2Q14681 263 aa17.31■□□□□ 0.36
ITGB4-208ENST00000582629 PRAMEF19Q5SWL8 479 aa17.31■□□□□ 0.36
ITGB4-208ENST00000582629 OSBP2Q969R2 916 aa17.31■□□□□ 0.36
ITGB4-208ENST00000582629 LBHD1Q9BQE6 289 aaPredicted RBP17.31■□□□□ 0.36
ITGB4-208ENST00000582629 MKNK2Q9HBH9 465 aa17.31■□□□□ 0.36
ITGB4-208ENST00000582629 PRKAG2Q9UGJ0 569 aa17.31■□□□□ 0.36
ITGB4-208ENST00000582629 SMCHD1A6NHR9 2005 aa17.31■□□□□ 0.36
ITGB4-208ENST00000582629 LTBP2Q14767 1821 aa17.31■□□□□ 0.36
ITGB4-208ENST00000582629 GPAA1O43292 621 aa17.3■□□□□ 0.36
ITGB4-208ENST00000582629 GNAT2P19087 354 aa17.3■□□□□ 0.36
ITGB4-208ENST00000582629 TSHZ3Q63HK5 1081 aa17.3■□□□□ 0.36
ITGB4-208ENST00000582629 DEFB123Q8N688 67 aa17.3■□□□□ 0.36
ITGB4-208ENST00000582629 REPS2Q8NFH8 660 aa17.3■□□□□ 0.36
ITGB4-208ENST00000582629 SLF1Q9BQI6 1058 aa17.3■□□□□ 0.36
ITGB4-208ENST00000582629 NYAP2Q9P242 653 aa17.3■□□□□ 0.36
ITGB4-208ENST00000582629 ZNF214Q9UL59 606 aaPredicted RBP17.3■□□□□ 0.36
ITGB4-208ENST00000582629 DIS3Q9Y2L1 958 aaKnown RBP17.3■□□□□ 0.36
ITGB4-208ENST00000582629 TDO2P48775 406 aa17.29■□□□□ 0.36
ITGB4-208ENST00000582629 LRRFIP1Q32MZ4 808 aaKnown RBP17.29■□□□□ 0.36
ITGB4-208ENST00000582629 ZNF792Q3KQV3 632 aa17.29■□□□□ 0.36
ITGB4-208ENST00000582629 STK11IPQ8N1F8 1099 aa17.29■□□□□ 0.36
ITGB4-208ENST00000582629 TINF2Q9BSI4 451 aa17.29■□□□□ 0.36
ITGB4-208ENST00000582629 ZNF287Q9HBT7 754 aa17.29■□□□□ 0.36
ITGB4-208ENST00000582629 ATP11BQ9Y2G3 1177 aa17.29■□□□□ 0.36
ITGB4-208ENST00000582629 F5H6K3 240 aa17.28■□□□□ 0.36
ITGB4-208ENST00000582629 MYCNP04198 464 aaPredicted RBP17.28■□□□□ 0.36
ITGB4-208ENST00000582629 PGK2P07205 417 aa17.28■□□□□ 0.36
ITGB4-208ENST00000582629 KLRC3Q07444 240 aa17.28■□□□□ 0.36
ITGB4-208ENST00000582629 SNX17Q15036 470 aa17.28■□□□□ 0.36
ITGB4-208ENST00000582629 LRRC41Q15345 812 aa17.28■□□□□ 0.36
ITGB4-208ENST00000582629 FAM47AQ5JRC9 791 aa17.28■□□□□ 0.36
ITGB4-208ENST00000582629 SLC39A5Q6ZMH5 540 aa17.28■□□□□ 0.36
ITGB4-208ENST00000582629 NUP88Q99567 741 aaPredicted RBP17.28■□□□□ 0.36
ITGB4-208ENST00000582629 TEX13BQ9BXU2 312 aa17.28■□□□□ 0.36
ITGB4-208ENST00000582629 EPB41L4AQ9HCS5 686 aaPredicted RBP17.28■□□□□ 0.36
ITGB4-208ENST00000582629 TTC41PQ6P2S7 1318 aa17.27■□□□□ 0.36
ITGB4-208ENST00000582629 M0R2C6 588 aa17.27■□□□□ 0.36
ITGB4-208ENST00000582629 NDUFB10O96000 172 aa17.27■□□□□ 0.36
ITGB4-208ENST00000582629 RARBP10826 455 aa17.27■□□□□ 0.36
ITGB4-208ENST00000582629 ZNF444Q8N0Y2 327 aaPredicted RBP17.27■□□□□ 0.36
ITGB4-208ENST00000582629 IGKV6D-41A0A0C4DH26 115 aa17.26■□□□□ 0.35
ITGB4-208ENST00000582629 ERC2O15083 957 aa17.26■□□□□ 0.35
ITGB4-208ENST00000582629 APPP05067 770 aa17.26■□□□□ 0.35
ITGB4-208ENST00000582629 ADCYAP1R1P41586 468 aa17.26■□□□□ 0.35
ITGB4-208ENST00000582629 TRIM60Q495X7 471 aa17.26■□□□□ 0.35
ITGB4-208ENST00000582629 SNRNP48Q6IEG0 339 aaKnown RBP17.26■□□□□ 0.35
ITGB4-208ENST00000582629 Q7L0L9 218 aa17.26■□□□□ 0.35
ITGB4-208ENST00000582629 MSL3Q8N5Y2 521 aaKnown RBP17.26■□□□□ 0.35
ITGB4-208ENST00000582629 SLC17A8Q8NDX2 589 aa17.26■□□□□ 0.35
ITGB4-208ENST00000582629 XPNPEP3Q9NQH7 507 aa17.26■□□□□ 0.35
ITGB4-208ENST00000582629 SYNPO2Q9UMS6 1093 aa17.26■□□□□ 0.35
ITGB4-208ENST00000582629 PHF24Q9UPV7 400 aa17.26■□□□□ 0.35
ITGB4-208ENST00000582629 PATL2C9JE40 543 aaKnown RBP17.25■□□□□ 0.35
ITGB4-208ENST00000582629 ATP2A1O14983 1001 aa17.25■□□□□ 0.35
ITGB4-208ENST00000582629 AKR1A1P14550 325 aa17.25■□□□□ 0.35
ITGB4-208ENST00000582629 C1orf53Q5VUE5 145 aa17.25■□□□□ 0.35
ITGB4-208ENST00000582629 RNF180Q86T96 592 aa17.25■□□□□ 0.35
ITGB4-208ENST00000582629 IFNL3Q8IZI9 196 aa17.25■□□□□ 0.35
ITGB4-208ENST00000582629 PRPF38AQ8NAV1 312 aaKnown RBP17.25■□□□□ 0.35
ITGB4-208ENST00000582629 MKL1Q969V6 931 aa17.25■□□□□ 0.35
ITGB4-208ENST00000582629 NACAP1Q9BZK3 213 aa17.25■□□□□ 0.35
ITGB4-208ENST00000582629 PRDM5Q9NQX1 630 aaPredicted RBP17.25■□□□□ 0.35
ITGB4-208ENST00000582629 MTMR10Q9NXD2 777 aa17.25■□□□□ 0.35
ITGB4-208ENST00000582629 CLIP2Q9UDT6 1046 aa17.25■□□□□ 0.35
ITGB4-208ENST00000582629 CNPY2Q9Y2B0 182 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms