RNA–Protein interactions for RNA: ENST00000581886.5

MPDU1-222, Transcript of mannose-P-dolichol utilization defect 1, human

TSL 3

Gene MPDU1, Length 924 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MPDU1-222	ENST00000581886	KANSL2	Q9H9L4	492 aa		13.23	□□□□□ -0.29
MPDU1-222	ENST00000581886	SLC4A4	Q9Y6R1	1079 aa		13.23	□□□□□ -0.29
MPDU1-222	ENST00000581886	FRMPD3	Q5JV73	1810 aa		13.23	□□□□□ -0.29
MPDU1-222	ENST00000581886	RLF	Q13129	1914 aa		13.22	□□□□□ -0.29
MPDU1-222	ENST00000581886	SMIM22	K7EJ46	135 aa		13.22	□□□□□ -0.29
MPDU1-222	ENST00000581886	ADCYAP1R1	P41586	468 aa		13.22	□□□□□ -0.29
MPDU1-222	ENST00000581886	LRRC41	Q15345	812 aa		13.22	□□□□□ -0.29
MPDU1-222	ENST00000581886	ZSCAN25	Q6NSZ9	544 aa		13.22	□□□□□ -0.29
MPDU1-222	ENST00000581886	MMP19	Q99542	508 aa		13.22	□□□□□ -0.29
MPDU1-222	ENST00000581886	GOPC	Q9HD26	462 aa		13.22	□□□□□ -0.29
MPDU1-222	ENST00000581886	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.22	□□□□□ -0.29
MPDU1-222	ENST00000581886	NRBP1	Q9UHY1	535 aa		13.22	□□□□□ -0.29
MPDU1-222	ENST00000581886	ADAMTS5	Q9UNA0	930 aa		13.22	□□□□□ -0.29
MPDU1-222	ENST00000581886	ZNF236	Q9UL36	1845 aa		13.22	□□□□□ -0.29
MPDU1-222	ENST00000581886	CHGB	P05060	677 aa		13.21	□□□□□ -0.29
MPDU1-222	ENST00000581886	STAT3	P40763	770 aa		13.21	□□□□□ -0.29
MPDU1-222	ENST00000581886	SNX17	Q15036	470 aa		13.21	□□□□□ -0.29
MPDU1-222	ENST00000581886	TRIM60	Q495X7	471 aa		13.21	□□□□□ -0.29
MPDU1-222	ENST00000581886	FAM47A	Q5JRC9	791 aa		13.21	□□□□□ -0.29
MPDU1-222	ENST00000581886	C1orf53	Q5VUE5	145 aa		13.21	□□□□□ -0.29
MPDU1-222	ENST00000581886	CTR9	Q6PD62	1173 aa		13.21	□□□□□ -0.29
MPDU1-222	ENST00000581886	RIOX2	Q8IUF8	465 aa		13.21	□□□□□ -0.29
MPDU1-222	ENST00000581886	FERMT2	Q96AC1	680 aa		13.21	□□□□□ -0.29
MPDU1-222	ENST00000581886	PUS7L	Q9H0K6	701 aa	Known RBP	13.21	□□□□□ -0.29
MPDU1-222	ENST00000581886	FBXO28	Q9NVF7	368 aa		13.21	□□□□□ -0.29
MPDU1-222	ENST00000581886	PPP1R9A	Q9ULJ8	1098 aa		13.21	□□□□□ -0.29
MPDU1-222	ENST00000581886		A0A0G2JMZ2	1700 aa		13.2	□□□□□ -0.3
MPDU1-222	ENST00000581886	VWA5A	O00534	786 aa		13.2	□□□□□ -0.3
MPDU1-222	ENST00000581886	RAD21	O60216	631 aa		13.2	□□□□□ -0.3
MPDU1-222	ENST00000581886	PGK2	P07205	417 aa		13.2	□□□□□ -0.3
MPDU1-222	ENST00000581886	RARB	P10826	455 aa		13.2	□□□□□ -0.3
MPDU1-222	ENST00000581886	COPB2	P35606	906 aa		13.2	□□□□□ -0.3
MPDU1-222	ENST00000581886	KCTD2	Q14681	263 aa		13.2	□□□□□ -0.3
MPDU1-222	ENST00000581886	SHH	Q15465	462 aa		13.2	□□□□□ -0.3
MPDU1-222	ENST00000581886	GUCD1	Q96NT3	240 aa		13.2	□□□□□ -0.3
MPDU1-222	ENST00000581886	TINF2	Q9BSI4	451 aa		13.2	□□□□□ -0.3
MPDU1-222	ENST00000581886	XPNPEP3	Q9NQH7	507 aa		13.2	□□□□□ -0.3
MPDU1-222	ENST00000581886	DIS3	Q9Y2L1	958 aa	Known RBP	13.2	□□□□□ -0.3
MPDU1-222	ENST00000581886	ZNF792	Q3KQV3	632 aa		13.19	□□□□□ -0.3
MPDU1-222	ENST00000581886	FAM83B	Q5T0W9	1011 aa		13.19	□□□□□ -0.3
MPDU1-222	ENST00000581886	ZNF697	Q5TEC3	545 aa		13.19	□□□□□ -0.3
MPDU1-222	ENST00000581886	DIEXF	Q68CQ4	756 aa	Known RBP	13.19	□□□□□ -0.3
MPDU1-222	ENST00000581886	RNF180	Q86T96	592 aa		13.19	□□□□□ -0.3
MPDU1-222	ENST00000581886	BAD	Q92934	168 aa		13.19	□□□□□ -0.3
MPDU1-222	ENST00000581886	FAM161B	Q96MY7	647 aa		13.19	□□□□□ -0.3
MPDU1-222	ENST00000581886	LRRCC1	Q9C099	1032 aa		13.19	□□□□□ -0.3
MPDU1-222	ENST00000581886	PDLIM7	Q9NR12	457 aa		13.19	□□□□□ -0.3
MPDU1-222	ENST00000581886	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.19	□□□□□ -0.3
MPDU1-222	ENST00000581886	PHF24	Q9UPV7	400 aa		13.19	□□□□□ -0.3
MPDU1-222	ENST00000581886	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.18	□□□□□ -0.3
MPDU1-222	ENST00000581886	TRIM43B	A6NCK2	446 aa		13.18	□□□□□ -0.3
MPDU1-222	ENST00000581886	TLE2	Q04725	743 aa		13.18	□□□□□ -0.3
MPDU1-222	ENST00000581886	SBK1	Q52WX2	424 aa		13.18	□□□□□ -0.3
MPDU1-222	ENST00000581886	C9orf50	Q5SZB4	431 aa		13.18	□□□□□ -0.3
MPDU1-222	ENST00000581886	SH3RF1	Q7Z6J0	888 aa		13.18	□□□□□ -0.3
MPDU1-222	ENST00000581886	REPS2	Q8NFH8	660 aa		13.18	□□□□□ -0.3
MPDU1-222	ENST00000581886	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.18	□□□□□ -0.3
MPDU1-222	ENST00000581886	STRBP	Q96SI9	672 aa	Known RBP	13.18	□□□□□ -0.3
MPDU1-222	ENST00000581886	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
MPDU1-222	ENST00000581886	ZNF214	Q9UL59	606 aa	Predicted RBP	13.18	□□□□□ -0.3
MPDU1-222	ENST00000581886	CNPY2	Q9Y2B0	182 aa		13.18	□□□□□ -0.3
MPDU1-222	ENST00000581886	TACC3	Q9Y6A5	838 aa		13.18	□□□□□ -0.3
MPDU1-222	ENST00000581886	LAMA2	P24043	3122 aa	Known RBP	13.18	□□□□□ -0.3
MPDU1-222	ENST00000581886	MYH8	P13535	1937 aa		13.17	□□□□□ -0.3
MPDU1-222	ENST00000581886	SMCHD1	A6NHR9	2005 aa		13.17	□□□□□ -0.3
MPDU1-222	ENST00000581886	SMARCA5	O60264	1052 aa	Predicted RBP	13.17	□□□□□ -0.3
MPDU1-222	ENST00000581886	PGK1	P00558	417 aa		13.17	□□□□□ -0.3
MPDU1-222	ENST00000581886	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.17	□□□□□ -0.3
MPDU1-222	ENST00000581886	AKR1A1	P14550	325 aa		13.17	□□□□□ -0.3
MPDU1-222	ENST00000581886	TAL1	P17542	331 aa	Predicted RBP	13.17	□□□□□ -0.3
MPDU1-222	ENST00000581886	GIMAP6	Q6P9H5	292 aa		13.17	□□□□□ -0.3
MPDU1-222	ENST00000581886	SLF1	Q9BQI6	1058 aa		13.17	□□□□□ -0.3
MPDU1-222	ENST00000581886	MKNK2	Q9HBH9	465 aa		13.17	□□□□□ -0.3
MPDU1-222	ENST00000581886	NYAP2	Q9P242	653 aa		13.17	□□□□□ -0.3
MPDU1-222	ENST00000581886	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.17	□□□□□ -0.3
MPDU1-222	ENST00000581886	GSG1L2	A8MUP6	293 aa		13.16	□□□□□ -0.3
MPDU1-222	ENST00000581886		F5H6K3	240 aa		13.16	□□□□□ -0.3
MPDU1-222	ENST00000581886	CLTB	P09497	229 aa		13.16	□□□□□ -0.3
MPDU1-222	ENST00000581886	RASA1	P20936	1047 aa		13.16	□□□□□ -0.3
MPDU1-222	ENST00000581886	KLRC3	Q07444	240 aa		13.16	□□□□□ -0.3
MPDU1-222	ENST00000581886	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
MPDU1-222	ENST00000581886	STK11IP	Q8N1F8	1099 aa		13.16	□□□□□ -0.3
MPDU1-222	ENST00000581886	MSL3	Q8N5Y2	521 aa	Known RBP	13.16	□□□□□ -0.3
MPDU1-222	ENST00000581886	DDX11	Q96FC9	970 aa		13.16	□□□□□ -0.3
MPDU1-222	ENST00000581886	NUP88	Q99567	741 aa	Predicted RBP	13.16	□□□□□ -0.3
MPDU1-222	ENST00000581886	TEX13B	Q9BXU2	312 aa		13.16	□□□□□ -0.3
MPDU1-222	ENST00000581886	SEMA6B	Q9H3T3	888 aa		13.16	□□□□□ -0.3
MPDU1-222	ENST00000581886	ECHDC1	Q9NTX5	307 aa		13.16	□□□□□ -0.3
MPDU1-222	ENST00000581886	RCAN3	Q9UKA8	241 aa		13.16	□□□□□ -0.3
MPDU1-222	ENST00000581886		A0A1W2PQ45	241 aa	Predicted RBP	13.15	□□□□□ -0.3
MPDU1-222	ENST00000581886		A0A1W2PQY0	241 aa		13.15	□□□□□ -0.3
MPDU1-222	ENST00000581886	MINDY4B	A8MYZ0	360 aa		13.15	□□□□□ -0.3
MPDU1-222	ENST00000581886	ITGB8	P26012	769 aa		13.15	□□□□□ -0.3
MPDU1-222	ENST00000581886	SMAD3	P84022	425 aa	Known RBP	13.15	□□□□□ -0.3
MPDU1-222	ENST00000581886	SNRNP48	Q6IEG0	339 aa	Known RBP	13.15	□□□□□ -0.3
MPDU1-222	ENST00000581886	KBTBD3	Q8NAB2	608 aa		13.15	□□□□□ -0.3
MPDU1-222	ENST00000581886	PRPF38A	Q8NAV1	312 aa	Known RBP	13.15	□□□□□ -0.3
MPDU1-222	ENST00000581886	APPBP2	Q92624	585 aa		13.15	□□□□□ -0.3
MPDU1-222	ENST00000581886	OSBP2	Q969R2	916 aa		13.15	□□□□□ -0.3
MPDU1-222	ENST00000581886	CDX2	Q99626	313 aa	Predicted RBP	13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms