RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 MEIS3Q99687 375 aa13.08□□□□□ -0.32
TOP3A-210ENST00000580713 PBX4Q9BYU1 374 aa13.08□□□□□ -0.32
TOP3A-210ENST00000580713 MUC3AQ02505 3323 aa13.08□□□□□ -0.32
TOP3A-210ENST00000580713 BCAR3O75815 825 aa13.07□□□□□ -0.32
TOP3A-210ENST00000580713 FAAP100Q0VG06 881 aa13.07□□□□□ -0.32
TOP3A-210ENST00000580713 PPIGQ13427 754 aaKnown RBP eCLIP13.07□□□□□ -0.323e-7■■■■■ 28.4
TOP3A-210ENST00000580713 ALDH1L2Q3SY69 923 aa13.07□□□□□ -0.32
TOP3A-210ENST00000580713 TATDN1Q6P1N9 297 aa13.07□□□□□ -0.32
TOP3A-210ENST00000580713 SHCBP1Q8NEM2 672 aa13.07□□□□□ -0.32
TOP3A-210ENST00000580713 MAML3Q96JK9 1138 aa13.07□□□□□ -0.32
TOP3A-210ENST00000580713 NECAB3Q96P71 396 aaPredicted RBP13.07□□□□□ -0.32
TOP3A-210ENST00000580713 MROH8Q9H579 483 aa13.07□□□□□ -0.32
TOP3A-210ENST00000580713 SERPINB13Q9UIV8 391 aa13.07□□□□□ -0.32
TOP3A-210ENST00000580713 MSRAQ9UJ68 235 aa13.07□□□□□ -0.32
TOP3A-210ENST00000580713 APBB1O00213 710 aa13.06□□□□□ -0.32
TOP3A-210ENST00000580713 TIMP1P01033 207 aa13.06□□□□□ -0.32
TOP3A-210ENST00000580713 FCER1AP12319 257 aa13.06□□□□□ -0.32
TOP3A-210ENST00000580713 CYP7A1P22680 504 aa13.06□□□□□ -0.32
TOP3A-210ENST00000580713 G3BP1Q13283 466 aaKnown RBP eCLIP13.06□□□□□ -0.32
TOP3A-210ENST00000580713 ADGRE1Q14246 886 aa13.06□□□□□ -0.32
TOP3A-210ENST00000580713 TTC6Q86TZ1 520 aa13.06□□□□□ -0.32
TOP3A-210ENST00000580713 MICALL1Q8N3F8 863 aa13.06□□□□□ -0.32
TOP3A-210ENST00000580713 STARD7Q9NQZ5 370 aa13.06□□□□□ -0.32
TOP3A-210ENST00000580713 HCN4Q9Y3Q4 1203 aa13.06□□□□□ -0.32
TOP3A-210ENST00000580713 MPHOSPH10O00566 681 aaKnown RBP13.05□□□□□ -0.32
TOP3A-210ENST00000580713 RIOK3O14730 519 aaKnown RBP13.05□□□□□ -0.32
TOP3A-210ENST00000580713 SEPT2Q15019 361 aa13.05□□□□□ -0.32
TOP3A-210ENST00000580713 CCDC158Q5M9N0 1113 aa13.05□□□□□ -0.32
TOP3A-210ENST00000580713 TMEM240Q5SV17 173 aa13.05□□□□□ -0.32
TOP3A-210ENST00000580713 MFSD5Q6N075 450 aa13.05□□□□□ -0.32
TOP3A-210ENST00000580713 ANKRD33Q7Z3H0 272 aa13.05□□□□□ -0.32
TOP3A-210ENST00000580713 ABRAQ8N0Z2 381 aa13.05□□□□□ -0.32
TOP3A-210ENST00000580713 MB21D1Q8N884 522 aa13.05□□□□□ -0.32
TOP3A-210ENST00000580713 NUP133Q8WUM0 1156 aa13.05□□□□□ -0.32
TOP3A-210ENST00000580713 VTI1AQ96AJ9 217 aa13.05□□□□□ -0.32
TOP3A-210ENST00000580713 TOX2Q96NM4 488 aa13.05□□□□□ -0.32
TOP3A-210ENST00000580713 NRBP1Q9UHY1 535 aa13.05□□□□□ -0.32
TOP3A-210ENST00000580713 NOB1Q9ULX3 412 aaKnown RBP13.05□□□□□ -0.32
TOP3A-210ENST00000580713 SMCHD1A6NHR9 2005 aa13.05□□□□□ -0.32
TOP3A-210ENST00000580713 BDP1A6H8Y1 2624 aa13.04□□□□□ -0.32
TOP3A-210ENST00000580713 MAP3K13O43283 966 aa13.04□□□□□ -0.32
TOP3A-210ENST00000580713 CYP2E1P05181 493 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-210ENST00000580713 GNAI3P08754 354 aa13.04□□□□□ -0.32
TOP3A-210ENST00000580713 ACRP10323 421 aa13.04□□□□□ -0.32
TOP3A-210ENST00000580713 PYGBP11216 843 aa13.04□□□□□ -0.32
TOP3A-210ENST00000580713 TAL1P17542 331 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-210ENST00000580713 ACLYP53396 1101 aa13.04□□□□□ -0.32
TOP3A-210ENST00000580713 SKIV2LQ15477 1246 aaKnown RBP13.04□□□□□ -0.32
TOP3A-210ENST00000580713 RAB30Q15771 203 aa13.04□□□□□ -0.32
TOP3A-210ENST00000580713 MIGA1Q8NAN2 632 aa13.04□□□□□ -0.32
TOP3A-210ENST00000580713 RNF25Q96BH1 459 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-210ENST00000580713 LENG1Q96BZ8 264 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-210ENST00000580713 MMP19Q99542 508 aa13.04□□□□□ -0.32
TOP3A-210ENST00000580713 API5Q9BZZ5 524 aaKnown RBP13.04□□□□□ -0.32
TOP3A-210ENST00000580713 EHD4Q9H223 541 aa13.04□□□□□ -0.32
TOP3A-210ENST00000580713 NKX2-4Q9H2Z4 354 aa13.04□□□□□ -0.32
TOP3A-210ENST00000580713 TRPC6Q9Y210 931 aa13.04□□□□□ -0.32
TOP3A-210ENST00000580713 FLOT1O75955 427 aa13.03□□□□□ -0.32
TOP3A-210ENST00000580713 PGK2P07205 417 aa13.03□□□□□ -0.32
TOP3A-210ENST00000580713 AKR1A1P14550 325 aa13.03□□□□□ -0.32
TOP3A-210ENST00000580713 CSF2RAP15509 400 aa13.03□□□□□ -0.32
TOP3A-210ENST00000580713 GUCY1A2P33402 732 aa13.03□□□□□ -0.32
TOP3A-210ENST00000580713 ZAP70P43403 619 aa13.03□□□□□ -0.32
TOP3A-210ENST00000580713 AAK1Q2M2I8 961 aa13.03□□□□□ -0.32
TOP3A-210ENST00000580713 ZNF365Q70YC5 407 aa13.03□□□□□ -0.32
TOP3A-210ENST00000580713 C16orf59Q7L2K0 433 aa13.03□□□□□ -0.32
TOP3A-210ENST00000580713 TMEM199Q8N511 208 aa13.03□□□□□ -0.32
TOP3A-210ENST00000580713 ATG4CQ96DT6 458 aa13.03□□□□□ -0.32
TOP3A-210ENST00000580713 TINF2Q9BSI4 451 aa13.03□□□□□ -0.32
TOP3A-210ENST00000580713 TSEN34Q9BSV6 310 aaKnown RBP13.03□□□□□ -0.32
TOP3A-210ENST00000580713 SLC28A3Q9HAS3 691 aa13.03□□□□□ -0.32
TOP3A-210ENST00000580713 PIH1D3Q9NQM4 214 aaKnown RBP13.03□□□□□ -0.32
TOP3A-210ENST00000580713 CXXC1Q9P0U4 656 aaPredicted RBP13.03□□□□□ -0.32
TOP3A-210ENST00000580713 ZNF236Q9UL36 1845 aa13.03□□□□□ -0.32
TOP3A-210ENST00000580713 TCF20Q9UGU0 1960 aaKnown RBP13.03□□□□□ -0.32
TOP3A-210ENST00000580713 PLXNA1Q9UIW2 1896 aa13.02□□□□□ -0.32
TOP3A-210ENST00000580713 A0A1W2PRG0 241 aa13.02□□□□□ -0.33
TOP3A-210ENST00000580713 IDH1O75874 414 aaKnown RBP13.02□□□□□ -0.33
TOP3A-210ENST00000580713 SLC25A27O95847 323 aa13.02□□□□□ -0.33
TOP3A-210ENST00000580713 POLR3DP05423 398 aaPredicted RBP13.02□□□□□ -0.33
TOP3A-210ENST00000580713 SHMT1P34896 483 aa13.02□□□□□ -0.33
TOP3A-210ENST00000580713 IRX6P78412 446 aaPredicted RBP13.02□□□□□ -0.33
TOP3A-210ENST00000580713 TFF2Q03403 129 aa13.02□□□□□ -0.33
TOP3A-210ENST00000580713 KCNA10Q16322 511 aa13.02□□□□□ -0.33
TOP3A-210ENST00000580713 PSRC1Q6PGN9 363 aaPredicted RBP13.02□□□□□ -0.33
TOP3A-210ENST00000580713 CERS3Q8IU89 383 aa13.02□□□□□ -0.33
TOP3A-210ENST00000580713 FRAT1Q92837 279 aaPredicted RBP13.02□□□□□ -0.33
TOP3A-210ENST00000580713 DCBLD2Q96PD2 775 aa13.02□□□□□ -0.33
TOP3A-210ENST00000580713 DBNDD2Q9BQY9 259 aa13.02□□□□□ -0.33
TOP3A-210ENST00000580713 PPP1R12CQ9BZL4 782 aa13.02□□□□□ -0.33
TOP3A-210ENST00000580713 MTIF3Q9H2K0 278 aaKnown RBP13.02□□□□□ -0.33
TOP3A-210ENST00000580713 TBX21Q9UL17 535 aa13.02□□□□□ -0.33
TOP3A-210ENST00000580713 CNPY2Q9Y2B0 182 aa13.02□□□□□ -0.33
TOP3A-210ENST00000580713 GTF3C3Q9Y5Q9 886 aa13.02□□□□□ -0.33
TOP3A-210ENST00000580713 CDK5RAP2Q96SN8 1893 aa13.02□□□□□ -0.33
TOP3A-210ENST00000580713 MOXD2PA6NHM9 499 aa13.01□□□□□ -0.33
TOP3A-210ENST00000580713 ADAMTS4O75173 837 aa13.01□□□□□ -0.33
TOP3A-210ENST00000580713 BMP1P13497 986 aa13.01□□□□□ -0.33
TOP3A-210ENST00000580713 PLCD1P51178 756 aa13.01□□□□□ -0.33
TOP3A-210ENST00000580713 OS9Q13438 667 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms