RNA–Protein interactions for RNA: ENST00000580059.5

KCTD1-207, Transcript of potassium channel tetramerization domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene KCTD1, Length 1,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD1-207ENST00000580059 SOX1O00570 391 aaPredicted RBP16.57■□□□□ 0.24
KCTD1-207ENST00000580059 SEPT4O43236 478 aa16.57■□□□□ 0.24
KCTD1-207ENST00000580059 EEF2P13639 858 aaKnown RBP16.57■□□□□ 0.24
KCTD1-207ENST00000580059 PLS1Q14651 629 aa16.57■□□□□ 0.24
KCTD1-207ENST00000580059 LRRFIP1Q32MZ4 808 aaKnown RBP16.57■□□□□ 0.24
KCTD1-207ENST00000580059 NCAPG2Q86XI2 1143 aa16.57■□□□□ 0.24
KCTD1-207ENST00000580059 KBTBD3Q8NAB2 608 aa16.57■□□□□ 0.24
KCTD1-207ENST00000580059 SENP6Q9GZR1 1112 aaPredicted RBP16.57■□□□□ 0.24
KCTD1-207ENST00000580059 CYP2D7A0A087X1C5 515 aa16.56■□□□□ 0.24
KCTD1-207ENST00000580059 COBLO75128 1261 aa16.56■□□□□ 0.24
KCTD1-207ENST00000580059 GNAT2P19087 354 aa16.56■□□□□ 0.24
KCTD1-207ENST00000580059 TRPV1Q8NER1 839 aa16.56■□□□□ 0.24
KCTD1-207ENST00000580059 APPBP2Q92624 585 aa16.56■□□□□ 0.24
KCTD1-207ENST00000580059 ZNF287Q9HBT7 754 aa16.56■□□□□ 0.24
KCTD1-207ENST00000580059 DIS3Q9Y2L1 958 aaKnown RBP16.56■□□□□ 0.24
KCTD1-207ENST00000580059 SMARCA5O60264 1052 aaPredicted RBP16.55■□□□□ 0.24
KCTD1-207ENST00000580059 TMEM132BQ14DG7 1078 aa16.55■□□□□ 0.24
KCTD1-207ENST00000580059 RIOX2Q8IUF8 465 aa16.55■□□□□ 0.24
KCTD1-207ENST00000580059 CLEC10AQ8IUN9 316 aa16.55■□□□□ 0.24
KCTD1-207ENST00000580059 LRCH3Q96II8 777 aa16.55■□□□□ 0.24
KCTD1-207ENST00000580059 MAML3Q96JK9 1138 aa16.55■□□□□ 0.24
KCTD1-207ENST00000580059 PPP1R9AQ9ULJ8 1098 aa16.55■□□□□ 0.24
KCTD1-207ENST00000580059 SYNPO2Q9UMS6 1093 aa16.55■□□□□ 0.24
KCTD1-207ENST00000580059 ROBO3Q96MS0 1386 aa16.55■□□□□ 0.24
KCTD1-207ENST00000580059 PARP14Q460N5 1801 aa16.55■□□□□ 0.24
KCTD1-207ENST00000580059 KBTBD13C9JR72 458 aa16.54■□□□□ 0.24
KCTD1-207ENST00000580059 VWA5AO00534 786 aa16.54■□□□□ 0.24
KCTD1-207ENST00000580059 KCTD2Q14681 263 aa16.54■□□□□ 0.24
KCTD1-207ENST00000580059 MKNK2Q9HBH9 465 aa16.54■□□□□ 0.24
KCTD1-207ENST00000580059 NYAP2Q9P242 653 aa16.54■□□□□ 0.24
KCTD1-207ENST00000580059 PRKAG2Q9UGJ0 569 aa16.54■□□□□ 0.24
KCTD1-207ENST00000580059 GSG1L2A8MUP6 293 aa16.53■□□□□ 0.24
KCTD1-207ENST00000580059 SMIM22K7EJ46 135 aa16.53■□□□□ 0.24
KCTD1-207ENST00000580059 RNF113AO15541 343 aaKnown RBP16.53■□□□□ 0.24
KCTD1-207ENST00000580059 CHGBP05060 677 aa16.53■□□□□ 0.24
KCTD1-207ENST00000580059 STAT3P40763 770 aa16.53■□□□□ 0.24
KCTD1-207ENST00000580059 MMP19Q99542 508 aa16.53■□□□□ 0.24
KCTD1-207ENST00000580059 LBHD1Q9BQE6 289 aaPredicted RBP16.53■□□□□ 0.24
KCTD1-207ENST00000580059 TTC41PQ6P2S7 1318 aa16.53■□□□□ 0.24
KCTD1-207ENST00000580059 RRP1P56182 461 aaKnown RBP16.53■□□□□ 0.24
KCTD1-207ENST00000580059 C1orf53Q5VUE5 145 aa16.53■□□□□ 0.24
KCTD1-207ENST00000580059 MSL3Q8N5Y2 521 aaKnown RBP16.53■□□□□ 0.24
KCTD1-207ENST00000580059 OSBP2Q969R2 916 aa16.53■□□□□ 0.24
KCTD1-207ENST00000580059 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.53■□□□□ 0.24
KCTD1-207ENST00000580059 ZNF214Q9UL59 606 aaPredicted RBP16.53■□□□□ 0.24
KCTD1-207ENST00000580059 GREB1LQ9C091 1923 aaPredicted RBP16.52■□□□□ 0.24
KCTD1-207ENST00000580059 ERC2O15083 957 aa16.52■□□□□ 0.23
KCTD1-207ENST00000580059 RASA1P20936 1047 aa16.52■□□□□ 0.23
KCTD1-207ENST00000580059 RTP1P59025 263 aa16.52■□□□□ 0.23
KCTD1-207ENST00000580059 SNX17Q15036 470 aa16.52■□□□□ 0.23
KCTD1-207ENST00000580059 FAM83BQ5T0W9 1011 aa16.52■□□□□ 0.23
KCTD1-207ENST00000580059 GJC2Q5T442 439 aaPredicted RBP16.52■□□□□ 0.23
KCTD1-207ENST00000580059 SLF1Q9BQI6 1058 aa16.52■□□□□ 0.23
KCTD1-207ENST00000580059 FBXO28Q9NVF7 368 aa16.52■□□□□ 0.23
KCTD1-207ENST00000580059 MINDY4BA8MYZ0 360 aa16.51■□□□□ 0.23
KCTD1-207ENST00000580059 GPAA1O43292 621 aa16.51■□□□□ 0.23
KCTD1-207ENST00000580059 ATN1P54259 1190 aaPredicted RBP16.51■□□□□ 0.23
KCTD1-207ENST00000580059 SAMD1Q6SPF0 538 aaPredicted RBP16.51■□□□□ 0.23
KCTD1-207ENST00000580059 SLC39A5Q6ZMH5 540 aa16.51■□□□□ 0.23
KCTD1-207ENST00000580059 ZNF444Q8N0Y2 327 aaPredicted RBP16.51■□□□□ 0.23
KCTD1-207ENST00000580059 PRPF38AQ8NAV1 312 aaKnown RBP16.51■□□□□ 0.23
KCTD1-207ENST00000580059 REPS2Q8NFH8 660 aa16.51■□□□□ 0.23
KCTD1-207ENST00000580059 TEX13BQ9BXU2 312 aa16.51■□□□□ 0.23
KCTD1-207ENST00000580059 NACAP1Q9BZK3 213 aa16.51■□□□□ 0.23
KCTD1-207ENST00000580059 PATL2C9JE40 543 aaKnown RBP16.5■□□□□ 0.23
KCTD1-207ENST00000580059 F5H6K3 240 aa16.5■□□□□ 0.23
KCTD1-207ENST00000580059 ATP2A1O14983 1001 aa16.5■□□□□ 0.23
KCTD1-207ENST00000580059 RAD21O60216 631 aa16.5■□□□□ 0.23
KCTD1-207ENST00000580059 RARBP10826 455 aa16.5■□□□□ 0.23
KCTD1-207ENST00000580059 TDO2P48775 406 aa16.5■□□□□ 0.23
KCTD1-207ENST00000580059 MDM2Q00987 491 aaPredicted RBP16.5■□□□□ 0.23
KCTD1-207ENST00000580059 KLRC3Q07444 240 aa16.5■□□□□ 0.23
KCTD1-207ENST00000580059 ZNF792Q3KQV3 632 aa16.5■□□□□ 0.23
KCTD1-207ENST00000580059 DEFB123Q8N688 67 aa16.5■□□□□ 0.23
KCTD1-207ENST00000580059 MKL1Q969V6 931 aa16.5■□□□□ 0.23
KCTD1-207ENST00000580059 TINF2Q9BSI4 451 aa16.5■□□□□ 0.23
KCTD1-207ENST00000580059 ZNFX1Q9P2E3 1918 aaKnown RBP16.5■□□□□ 0.23
KCTD1-207ENST00000580059 IGKV6D-41A0A0C4DH26 115 aa16.49■□□□□ 0.23
KCTD1-207ENST00000580059 NDUFB10O96000 172 aa16.49■□□□□ 0.23
KCTD1-207ENST00000580059 LRRC41Q15345 812 aa16.49■□□□□ 0.23
KCTD1-207ENST00000580059 RNF180Q86T96 592 aa16.49■□□□□ 0.23
KCTD1-207ENST00000580059 CNPY2Q9Y2B0 182 aa16.49■□□□□ 0.23
KCTD1-207ENST00000580059 COL11A1P12107 1806 aaPredicted RBP16.49■□□□□ 0.23
KCTD1-207ENST00000580059 SZT2Q5T011 3432 aa16.48■□□□□ 0.23
KCTD1-207ENST00000580059 APPP05067 770 aa16.48■□□□□ 0.23
KCTD1-207ENST00000580059 SLC3A2P08195 630 aaKnown RBP16.48■□□□□ 0.23
KCTD1-207ENST00000580059 AKR1A1P14550 325 aa16.48■□□□□ 0.23
KCTD1-207ENST00000580059 FAM47AQ5JRC9 791 aa16.48■□□□□ 0.23
KCTD1-207ENST00000580059 PPP4R3BQ5MIZ7 849 aa16.48■□□□□ 0.23
KCTD1-207ENST00000580059 PRAMEF19Q5SWL8 479 aa16.48■□□□□ 0.23
KCTD1-207ENST00000580059 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.48■□□□□ 0.23
KCTD1-207ENST00000580059 IFNL3Q8IZI9 196 aa16.48■□□□□ 0.23
KCTD1-207ENST00000580059 GMCL1P1Q8NEA9 526 aa16.48■□□□□ 0.23
KCTD1-207ENST00000580059 EPB41L4AQ9HCS5 686 aaPredicted RBP16.48■□□□□ 0.23
KCTD1-207ENST00000580059 XPNPEP3Q9NQH7 507 aa16.48■□□□□ 0.23
KCTD1-207ENST00000580059 CLIP2Q9UDT6 1046 aa16.48■□□□□ 0.23
KCTD1-207ENST00000580059 FEM1BQ9UK73 627 aa16.48■□□□□ 0.23
KCTD1-207ENST00000580059 PHF24Q9UPV7 400 aa16.48■□□□□ 0.23
KCTD1-207ENST00000580059 ATP11BQ9Y2G3 1177 aa16.48■□□□□ 0.23
KCTD1-207ENST00000580059 PLIN4Q96Q06 1357 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms