RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 SAMD1Q6SPF0 538 aaPredicted RBP19.92■□□□□ 0.78
CDK5RAP3-206ENST00000578018 NCAPG2Q86XI2 1143 aa19.92■□□□□ 0.78
CDK5RAP3-206ENST00000578018 ABRAQ8N0Z2 381 aa19.92■□□□□ 0.78
CDK5RAP3-206ENST00000578018 PI4K2BQ8TCG2 481 aa19.92■□□□□ 0.78
CDK5RAP3-206ENST00000578018 OTUD7AQ8TE49 926 aaPredicted RBP19.92■□□□□ 0.78
CDK5RAP3-206ENST00000578018 FBXO28Q9NVF7 368 aa19.92■□□□□ 0.78
CDK5RAP3-206ENST00000578018 DNAH12Q6ZR08 3092 aa19.91■□□□□ 0.78
CDK5RAP3-206ENST00000578018 PLXNA1Q9UIW2 1896 aa19.91■□□□□ 0.78
CDK5RAP3-206ENST00000578018 COBLO75128 1261 aa19.91■□□□□ 0.78
CDK5RAP3-206ENST00000578018 GNAT2P19087 354 aa19.91■□□□□ 0.78
CDK5RAP3-206ENST00000578018 GDF15Q99988 308 aa19.91■□□□□ 0.78
CDK5RAP3-206ENST00000578018 MINDY4BA8MYZ0 360 aa19.9■□□□□ 0.78
CDK5RAP3-206ENST00000578018 SYN1P17600 705 aa19.9■□□□□ 0.78
CDK5RAP3-206ENST00000578018 CNGA1P29973 690 aa19.9■□□□□ 0.78
CDK5RAP3-206ENST00000578018 TDO2P48775 406 aa19.9■□□□□ 0.78
CDK5RAP3-206ENST00000578018 RRP1P56182 461 aaKnown RBP19.9■□□□□ 0.78
CDK5RAP3-206ENST00000578018 LRRC26Q2I0M4 334 aa19.9■□□□□ 0.78
CDK5RAP3-206ENST00000578018 FAM83BQ5T0W9 1011 aa19.9■□□□□ 0.78
CDK5RAP3-206ENST00000578018 STK11IPQ8N1F8 1099 aa19.9■□□□□ 0.78
CDK5RAP3-206ENST00000578018 MKNK2Q9HBH9 465 aa19.9■□□□□ 0.78
CDK5RAP3-206ENST00000578018 PPP1R9AQ9ULJ8 1098 aa19.9■□□□□ 0.78
CDK5RAP3-206ENST00000578018 ERC2O15083 957 aa19.89■□□□□ 0.77
CDK5RAP3-206ENST00000578018 SLC25A27O95847 323 aa19.89■□□□□ 0.77
CDK5RAP3-206ENST00000578018 BMP8BP34820 402 aa19.89■□□□□ 0.77
CDK5RAP3-206ENST00000578018 LRRFIP1Q32MZ4 808 aaKnown RBP19.89■□□□□ 0.77
CDK5RAP3-206ENST00000578018 SLC5A4Q9NY91 659 aa19.89■□□□□ 0.77
CDK5RAP3-206ENST00000578018 NYAP2Q9P242 653 aa19.89■□□□□ 0.77
CDK5RAP3-206ENST00000578018 IGKV6D-41A0A0C4DH26 115 aa19.88■□□□□ 0.77
CDK5RAP3-206ENST00000578018 VWA5AO00534 786 aa19.88■□□□□ 0.77
CDK5RAP3-206ENST00000578018 RAD21O60216 631 aa19.88■□□□□ 0.77
CDK5RAP3-206ENST00000578018 FCER1AP12319 257 aa19.88■□□□□ 0.77
CDK5RAP3-206ENST00000578018 RIOX2Q8IUF8 465 aa19.88■□□□□ 0.77
CDK5RAP3-206ENST00000578018 REPS2Q8NFH8 660 aa19.88■□□□□ 0.77
CDK5RAP3-206ENST00000578018 MAML3Q96JK9 1138 aa19.88■□□□□ 0.77
CDK5RAP3-206ENST00000578018 SEC62Q99442 399 aaKnown RBP19.88■□□□□ 0.77
CDK5RAP3-206ENST00000578018 ZNF214Q9UL59 606 aaPredicted RBP19.88■□□□□ 0.77
CDK5RAP3-206ENST00000578018 SALL3Q9BXA9 1300 aa19.87■□□□□ 0.77
CDK5RAP3-206ENST00000578018 DNM1LO00429 736 aa19.87■□□□□ 0.77
CDK5RAP3-206ENST00000578018 SOX1O00570 391 aaPredicted RBP19.87■□□□□ 0.77
CDK5RAP3-206ENST00000578018 APPP05067 770 aa19.87■□□□□ 0.77
CDK5RAP3-206ENST00000578018 MX1P20591 662 aa19.87■□□□□ 0.77
CDK5RAP3-206ENST00000578018 MAGEA10P43363 369 aaPredicted RBP19.87■□□□□ 0.77
CDK5RAP3-206ENST00000578018 IFNL3Q8IZI9 196 aa19.87■□□□□ 0.77
CDK5RAP3-206ENST00000578018 NUP88Q99567 741 aaPredicted RBP19.87■□□□□ 0.77
CDK5RAP3-206ENST00000578018 FSD1Q9BTV5 496 aa19.87■□□□□ 0.77
CDK5RAP3-206ENST00000578018 PLIN4Q96Q06 1357 aa19.86■□□□□ 0.77
CDK5RAP3-206ENST00000578018 PATL2C9JE40 543 aaKnown RBP19.86■□□□□ 0.77
CDK5RAP3-206ENST00000578018 PRDM1O75626 825 aa19.86■□□□□ 0.77
CDK5RAP3-206ENST00000578018 NDUFB10O96000 172 aa19.86■□□□□ 0.77
CDK5RAP3-206ENST00000578018 ZMYM1Q5SVZ6 1142 aa19.86■□□□□ 0.77
CDK5RAP3-206ENST00000578018 MMP19Q99542 508 aa19.86■□□□□ 0.77
CDK5RAP3-206ENST00000578018 SENP6Q9GZR1 1112 aaPredicted RBP19.86■□□□□ 0.77
CDK5RAP3-206ENST00000578018 ZNF287Q9HBT7 754 aa19.86■□□□□ 0.77
CDK5RAP3-206ENST00000578018 SMCHD1A6NHR9 2005 aa19.86■□□□□ 0.77
CDK5RAP3-206ENST00000578018 F5H6K3 240 aa19.85■□□□□ 0.77
CDK5RAP3-206ENST00000578018 SEPT4O43236 478 aa19.85■□□□□ 0.77
CDK5RAP3-206ENST00000578018 COPB2P35606 906 aa19.85■□□□□ 0.77
CDK5RAP3-206ENST00000578018 STAT3P40763 770 aa19.85■□□□□ 0.77
CDK5RAP3-206ENST00000578018 KLRC3Q07444 240 aa19.85■□□□□ 0.77
CDK5RAP3-206ENST00000578018 SLF1Q9BQI6 1058 aa19.85■□□□□ 0.77
CDK5RAP3-206ENST00000578018 NACAP1Q9BZK3 213 aa19.85■□□□□ 0.77
CDK5RAP3-206ENST00000578018 PGK2P07205 417 aa19.84■□□□□ 0.77
CDK5RAP3-206ENST00000578018 KCTD2Q14681 263 aa19.84■□□□□ 0.77
CDK5RAP3-206ENST00000578018 PRAMEF19Q5SWL8 479 aa19.84■□□□□ 0.77
CDK5RAP3-206ENST00000578018 CEP95Q96GE4 821 aa19.84■□□□□ 0.77
CDK5RAP3-206ENST00000578018 CRBNQ96SW2 442 aa19.84■□□□□ 0.77
CDK5RAP3-206ENST00000578018 MTMR4Q9NYA4 1195 aa19.84■□□□□ 0.77
CDK5RAP3-206ENST00000578018 CLIP2Q9UDT6 1046 aa19.84■□□□□ 0.77
CDK5RAP3-206ENST00000578018 GJC2Q5T442 439 aaPredicted RBP19.83■□□□□ 0.77
CDK5RAP3-206ENST00000578018 ANO1Q5XXA6 986 aa19.83■□□□□ 0.77
CDK5RAP3-206ENST00000578018 ZNF444Q8N0Y2 327 aaPredicted RBP19.83■□□□□ 0.77
CDK5RAP3-206ENST00000578018 ARRDC4Q8NCT1 418 aa19.83■□□□□ 0.77
CDK5RAP3-206ENST00000578018 MKL1Q969V6 931 aa19.83■□□□□ 0.77
CDK5RAP3-206ENST00000578018 LRCH3Q96II8 777 aa19.83■□□□□ 0.77
CDK5RAP3-206ENST00000578018 TEX13BQ9BXU2 312 aa19.83■□□□□ 0.77
CDK5RAP3-206ENST00000578018 NAPBQ9H115 298 aa19.83■□□□□ 0.77
CDK5RAP3-206ENST00000578018 SYNPO2Q9UMS6 1093 aa19.83■□□□□ 0.77
CDK5RAP3-206ENST00000578018 LTBP2Q14767 1821 aa19.83■□□□□ 0.76
CDK5RAP3-206ENST00000578018 FOXP2O15409 715 aa19.82■□□□□ 0.76
CDK5RAP3-206ENST00000578018 TTLL1O95922 423 aa19.82■□□□□ 0.76
CDK5RAP3-206ENST00000578018 ZNF792Q3KQV3 632 aa19.82■□□□□ 0.76
CDK5RAP3-206ENST00000578018 PRPF38AQ8NAV1 312 aaKnown RBP19.82■□□□□ 0.76
CDK5RAP3-206ENST00000578018 NEDD1Q8NHV4 660 aa19.82■□□□□ 0.76
CDK5RAP3-206ENST00000578018 NRBP1Q9UHY1 535 aa19.82■□□□□ 0.76
CDK5RAP3-206ENST00000578018 DIS3Q9Y2L1 958 aaKnown RBP19.82■□□□□ 0.76
CDK5RAP3-206ENST00000578018 KBTBD13C9JR72 458 aa19.81■□□□□ 0.76
CDK5RAP3-206ENST00000578018 ATN1P54259 1190 aaPredicted RBP19.81■□□□□ 0.76
CDK5RAP3-206ENST00000578018 PDE4BQ07343 736 aa19.81■□□□□ 0.76
CDK5RAP3-206ENST00000578018 PPARAQ07869 468 aa19.81■□□□□ 0.76
CDK5RAP3-206ENST00000578018 FAM47AQ5JRC9 791 aa19.81■□□□□ 0.76
CDK5RAP3-206ENST00000578018 SNRNP48Q6IEG0 339 aaKnown RBP19.81■□□□□ 0.76
CDK5RAP3-206ENST00000578018 TDHQ8IZJ6 230 aa19.81■□□□□ 0.76
CDK5RAP3-206ENST00000578018 LRRC47Q8N1G4 583 aaKnown RBP19.81■□□□□ 0.76
CDK5RAP3-206ENST00000578018 GMCL1P1Q8NEA9 526 aa19.81■□□□□ 0.76
CDK5RAP3-206ENST00000578018 TINF2Q9BSI4 451 aa19.81■□□□□ 0.76
CDK5RAP3-206ENST00000578018 UBE2OQ9C0C9 1292 aaKnown RBP19.81■□□□□ 0.76
CDK5RAP3-206ENST00000578018 ATP2A1O14983 1001 aa19.8■□□□□ 0.76
CDK5RAP3-206ENST00000578018 TSPY3P0CV98 308 aa19.8■□□□□ 0.76
CDK5RAP3-206ENST00000578018 TSPY8P0CW00 308 aa19.8■□□□□ 0.76
CDK5RAP3-206ENST00000578018 RTP1P59025 263 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms