RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 FAM47AQ5JRC9 791 aa14.21□□□□□ -0.13
CDH8-202ENST00000577228 C16orf86Q6ZW13 317 aa14.21□□□□□ -0.13
CDH8-202ENST00000577228 HAUS7Q99871 368 aa14.21□□□□□ -0.13
CDH8-202ENST00000577228 BAZ2AQ9UIF9 1905 aaKnown RBP14.21□□□□□ -0.14
CDH8-202ENST00000577228 COL6A3P12111 3177 aa14.2□□□□□ -0.14
CDH8-202ENST00000577228 LTBP2Q14767 1821 aa14.2□□□□□ -0.14
CDH8-202ENST00000577228 POTEB2H3BUK9 544 aa14.2□□□□□ -0.14
CDH8-202ENST00000577228 CHGBP05060 677 aa14.2□□□□□ -0.14
CDH8-202ENST00000577228 EEF2P13639 858 aaKnown RBP14.2□□□□□ -0.14
CDH8-202ENST00000577228 ADCYAP1R1P41586 468 aa14.2□□□□□ -0.14
CDH8-202ENST00000577228 SNX17Q15036 470 aa14.2□□□□□ -0.14
CDH8-202ENST00000577228 MMP19Q99542 508 aa14.2□□□□□ -0.14
CDH8-202ENST00000577228 KANSL2Q9H9L4 492 aa14.2□□□□□ -0.14
CDH8-202ENST00000577228 GOPCQ9HD26 462 aa14.2□□□□□ -0.14
CDH8-202ENST00000577228 FBXO28Q9NVF7 368 aa14.2□□□□□ -0.14
CDH8-202ENST00000577228 NRBP1Q9UHY1 535 aa14.2□□□□□ -0.14
CDH8-202ENST00000577228 SLC4A4Q9Y6R1 1079 aa14.2□□□□□ -0.14
CDH8-202ENST00000577228 CUL9Q8IWT3 2517 aa14.2□□□□□ -0.14
CDH8-202ENST00000577228 RAD21O60216 631 aa14.19□□□□□ -0.14
CDH8-202ENST00000577228 PGK2P07205 417 aa14.19□□□□□ -0.14
CDH8-202ENST00000577228 KCTD2Q14681 263 aa14.19□□□□□ -0.14
CDH8-202ENST00000577228 ZNF697Q5TEC3 545 aa14.19□□□□□ -0.14
CDH8-202ENST00000577228 ZSCAN25Q6NSZ9 544 aa14.19□□□□□ -0.14
CDH8-202ENST00000577228 RIOX2Q8IUF8 465 aa14.19□□□□□ -0.14
CDH8-202ENST00000577228 FERMT2Q96AC1 680 aa14.19□□□□□ -0.14
CDH8-202ENST00000577228 FAM161BQ96MY7 647 aa14.19□□□□□ -0.14
CDH8-202ENST00000577228 GUCD1Q96NT3 240 aa14.19□□□□□ -0.14
CDH8-202ENST00000577228 CHMP4BQ9H444 224 aaKnown RBP14.19□□□□□ -0.14
CDH8-202ENST00000577228 XPNPEP3Q9NQH7 507 aa14.19□□□□□ -0.14
CDH8-202ENST00000577228 PDLIM7Q9NR12 457 aa14.19□□□□□ -0.14
CDH8-202ENST00000577228 PPP1R9AQ9ULJ8 1098 aa14.19□□□□□ -0.14
CDH8-202ENST00000577228 ADAMTS5Q9UNA0 930 aa14.19□□□□□ -0.14
CDH8-202ENST00000577228 PARP14Q460N5 1801 aa14.19□□□□□ -0.14
CDH8-202ENST00000577228 VWA5AO00534 786 aa14.18□□□□□ -0.14
CDH8-202ENST00000577228 RARBP10826 455 aa14.18□□□□□ -0.14
CDH8-202ENST00000577228 COPB2P35606 906 aa14.18□□□□□ -0.14
CDH8-202ENST00000577228 STAT3P40763 770 aa14.18□□□□□ -0.14
CDH8-202ENST00000577228 SHHQ15465 462 aa14.18□□□□□ -0.14
CDH8-202ENST00000577228 FAM83BQ5T0W9 1011 aa14.18□□□□□ -0.14
CDH8-202ENST00000577228 CTR9Q6PD62 1173 aa14.18□□□□□ -0.14
CDH8-202ENST00000577228 BADQ92934 168 aa14.18□□□□□ -0.14
CDH8-202ENST00000577228 ARPP21Q9UBL0 812 aaPredicted RBP14.18□□□□□ -0.14
CDH8-202ENST00000577228 PHF24Q9UPV7 400 aa14.18□□□□□ -0.14
CDH8-202ENST00000577228 TLE2Q04725 743 aa14.17□□□□□ -0.14
CDH8-202ENST00000577228 ZNF792Q3KQV3 632 aa14.17□□□□□ -0.14
CDH8-202ENST00000577228 C9orf50Q5SZB4 431 aa14.17□□□□□ -0.14
CDH8-202ENST00000577228 C1orf53Q5VUE5 145 aa14.17□□□□□ -0.14
CDH8-202ENST00000577228 SH3RF1Q7Z6J0 888 aa14.17□□□□□ -0.14
CDH8-202ENST00000577228 TINF2Q9BSI4 451 aa14.17□□□□□ -0.14
CDH8-202ENST00000577228 LRRCC1Q9C099 1032 aa14.17□□□□□ -0.14
CDH8-202ENST00000577228 PUS7LQ9H0K6 701 aaKnown RBP14.17□□□□□ -0.14
CDH8-202ENST00000577228 ZNF214Q9UL59 606 aaPredicted RBP14.17□□□□□ -0.14
CDH8-202ENST00000577228 DIS3Q9Y2L1 958 aaKnown RBP14.17□□□□□ -0.14
CDH8-202ENST00000577228 ROBO3Q96MS0 1386 aa14.17□□□□□ -0.14
CDH8-202ENST00000577228 COL11A1P12107 1806 aaPredicted RBP14.17□□□□□ -0.14
CDH8-202ENST00000577228 MYH7P12883 1935 aa14.17□□□□□ -0.14
CDH8-202ENST00000577228 TRIM43BA6NCK2 446 aa14.16□□□□□ -0.14
CDH8-202ENST00000577228 PGK1P00558 417 aa14.16□□□□□ -0.14
CDH8-202ENST00000577228 TAL1P17542 331 aaPredicted RBP14.16□□□□□ -0.14
CDH8-202ENST00000577228 RNF180Q86T96 592 aa14.16□□□□□ -0.14
CDH8-202ENST00000577228 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.16□□□□□ -0.14
CDH8-202ENST00000577228 REPS2Q8NFH8 660 aa14.16□□□□□ -0.14
CDH8-202ENST00000577228 TRIM43Q96BQ3 446 aaPredicted RBP14.16□□□□□ -0.14
CDH8-202ENST00000577228 CNPY2Q9Y2B0 182 aa14.16□□□□□ -0.14
CDH8-202ENST00000577228 AKR1A1P14550 325 aa14.15□□□□□ -0.14
CDH8-202ENST00000577228 STRBPQ96SI9 672 aaKnown RBP14.15□□□□□ -0.14
CDH8-202ENST00000577228 NUP88Q99567 741 aaPredicted RBP14.15□□□□□ -0.14
CDH8-202ENST00000577228 SLF1Q9BQI6 1058 aa14.15□□□□□ -0.14
CDH8-202ENST00000577228 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.15□□□□□ -0.14
CDH8-202ENST00000577228 TEX13BQ9BXU2 312 aa14.15□□□□□ -0.14
CDH8-202ENST00000577228 TACC3Q9Y6A5 838 aa14.15□□□□□ -0.14
CDH8-202ENST00000577228 ZNFX1Q9P2E3 1918 aaKnown RBP14.15□□□□□ -0.14
CDH8-202ENST00000577228 A0A1W2PQ45 241 aaPredicted RBP14.14□□□□□ -0.15
CDH8-202ENST00000577228 A0A1W2PQY0 241 aa14.14□□□□□ -0.15
CDH8-202ENST00000577228 SMARCA5O60264 1052 aaPredicted RBP14.14□□□□□ -0.15
CDH8-202ENST00000577228 CLTBP09497 229 aa14.14□□□□□ -0.15
CDH8-202ENST00000577228 ZNF865P0CJ78 1059 aaPredicted RBP14.14□□□□□ -0.15
CDH8-202ENST00000577228 RASA1P20936 1047 aa14.14□□□□□ -0.15
CDH8-202ENST00000577228 SBK1Q52WX2 424 aa14.14□□□□□ -0.15
CDH8-202ENST00000577228 DIEXFQ68CQ4 756 aaKnown RBP14.14□□□□□ -0.15
CDH8-202ENST00000577228 SNRNP48Q6IEG0 339 aaKnown RBP14.14□□□□□ -0.15
CDH8-202ENST00000577228 STK11IPQ8N1F8 1099 aa14.14□□□□□ -0.15
CDH8-202ENST00000577228 LENG1Q96BZ8 264 aaPredicted RBP14.14□□□□□ -0.15
CDH8-202ENST00000577228 MKNK2Q9HBH9 465 aa14.14□□□□□ -0.15
CDH8-202ENST00000577228 ECHDC1Q9NTX5 307 aa14.14□□□□□ -0.15
CDH8-202ENST00000577228 NYAP2Q9P242 653 aa14.14□□□□□ -0.15
CDH8-202ENST00000577228 DNAH12Q6ZR08 3092 aa14.13□□□□□ -0.15
CDH8-202ENST00000577228 PLXNA1Q9UIW2 1896 aa14.13□□□□□ -0.15
CDH8-202ENST00000577228 GSG1L2A8MUP6 293 aa14.13□□□□□ -0.15
CDH8-202ENST00000577228 MINDY4BA8MYZ0 360 aa14.13□□□□□ -0.15
CDH8-202ENST00000577228 PQBP1O60828 265 aaKnown RBP14.13□□□□□ -0.15
CDH8-202ENST00000577228 NDUFB10O96000 172 aa14.13□□□□□ -0.15
CDH8-202ENST00000577228 SMAD3P84022 425 aaKnown RBP14.13□□□□□ -0.15
CDH8-202ENST00000577228 GIMAP6Q6P9H5 292 aa14.13□□□□□ -0.15
CDH8-202ENST00000577228 MSL3Q8N5Y2 521 aaKnown RBP14.13□□□□□ -0.15
CDH8-202ENST00000577228 DDX11Q96FC9 970 aa14.13□□□□□ -0.15
CDH8-202ENST00000577228 CDX2Q99626 313 aaPredicted RBP14.13□□□□□ -0.15
CDH8-202ENST00000577228 SEMA6BQ9H3T3 888 aa14.13□□□□□ -0.15
CDH8-202ENST00000577228 RCAN3Q9UKA8 241 aa14.13□□□□□ -0.15
CDH8-202ENST00000577228 SMCHD1A6NHR9 2005 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms