RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 CHGBP05060 677 aa12.55□□□□□ -0.4
TVP23B-208ENST00000575261 FCER1AP12319 257 aa12.55□□□□□ -0.4
TVP23B-208ENST00000575261 ATN1P54259 1190 aaPredicted RBP12.55□□□□□ -0.4
TVP23B-208ENST00000575261 RTP1P59025 263 aa12.55□□□□□ -0.4
TVP23B-208ENST00000575261 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
TVP23B-208ENST00000575261 SIAH1Q8IUQ4 282 aa12.55□□□□□ -0.4
TVP23B-208ENST00000575261 KANSL2Q9H9L4 492 aa12.55□□□□□ -0.4
TVP23B-208ENST00000575261 GOPCQ9HD26 462 aa12.55□□□□□ -0.4
TVP23B-208ENST00000575261 PRKAG2Q9UGJ0 569 aa12.55□□□□□ -0.4
TVP23B-208ENST00000575261 RCAN3Q9UKA8 241 aa12.55□□□□□ -0.4
TVP23B-208ENST00000575261 CDH23Q9H251 3354 aa12.55□□□□□ -0.4
TVP23B-208ENST00000575261 CUL9Q8IWT3 2517 aa12.55□□□□□ -0.4
TVP23B-208ENST00000575261 SMIM22K7EJ46 135 aa12.54□□□□□ -0.4
TVP23B-208ENST00000575261 EEF2P13639 858 aaKnown RBP12.54□□□□□ -0.4
TVP23B-208ENST00000575261 TMEM132BQ14DG7 1078 aa12.54□□□□□ -0.4
TVP23B-208ENST00000575261 GJC2Q5T442 439 aaPredicted RBP12.54□□□□□ -0.4
TVP23B-208ENST00000575261 ANO1Q5XXA6 986 aa12.54□□□□□ -0.4
TVP23B-208ENST00000575261 CTR9Q6PD62 1173 aa12.54□□□□□ -0.4
TVP23B-208ENST00000575261 Q7L0L9 218 aa12.54□□□□□ -0.4
TVP23B-208ENST00000575261 MAML3Q96JK9 1138 aa12.54□□□□□ -0.4
TVP23B-208ENST00000575261 PUS7LQ9H0K6 701 aaKnown RBP12.54□□□□□ -0.4
TVP23B-208ENST00000575261 ROBO3Q96MS0 1386 aa12.54□□□□□ -0.4
TVP23B-208ENST00000575261 PLXNA1Q9UIW2 1896 aa12.53□□□□□ -0.4
TVP23B-208ENST00000575261 COPB2P35606 906 aa12.53□□□□□ -0.4
TVP23B-208ENST00000575261 RIOX2Q8IUF8 465 aa12.53□□□□□ -0.4
TVP23B-208ENST00000575261 GPATCH3Q96I76 525 aa12.53□□□□□ -0.4
TVP23B-208ENST00000575261 MMP19Q99542 508 aa12.53□□□□□ -0.4
TVP23B-208ENST00000575261 ECHDC1Q9NTX5 307 aa12.53□□□□□ -0.4
TVP23B-208ENST00000575261 FBXO28Q9NVF7 368 aa12.53□□□□□ -0.4
TVP23B-208ENST00000575261 NRBP1Q9UHY1 535 aa12.53□□□□□ -0.4
TVP23B-208ENST00000575261 PPP1R9AQ9ULJ8 1098 aa12.53□□□□□ -0.4
TVP23B-208ENST00000575261 ADAMTS5Q9UNA0 930 aa12.53□□□□□ -0.4
TVP23B-208ENST00000575261 ATP11BQ9Y2G3 1177 aa12.53□□□□□ -0.4
TVP23B-208ENST00000575261 STXBP5LQ9Y2K9 1186 aa12.53□□□□□ -0.4
TVP23B-208ENST00000575261 RAD21O60216 631 aa12.52□□□□□ -0.41
TVP23B-208ENST00000575261 SMARCA5O60264 1052 aaPredicted RBP12.52□□□□□ -0.41
TVP23B-208ENST00000575261 MYCNP04198 464 aaPredicted RBP12.52□□□□□ -0.41
TVP23B-208ENST00000575261 KCTD2Q14681 263 aa12.52□□□□□ -0.41
TVP23B-208ENST00000575261 SNX17Q15036 470 aa12.52□□□□□ -0.41
TVP23B-208ENST00000575261 FAM47AQ5JRC9 791 aa12.52□□□□□ -0.41
TVP23B-208ENST00000575261 SLC39A5Q6ZMH5 540 aa12.52□□□□□ -0.41
TVP23B-208ENST00000575261 MTMR10Q9NXD2 777 aa12.52□□□□□ -0.41
TVP23B-208ENST00000575261 ZNF214Q9UL59 606 aaPredicted RBP12.52□□□□□ -0.41
TVP23B-208ENST00000575261 ZNFX1Q9P2E3 1918 aaKnown RBP12.52□□□□□ -0.41
TVP23B-208ENST00000575261 VCANP13611 3396 aa12.51□□□□□ -0.41
TVP23B-208ENST00000575261 VWA5AO00534 786 aa12.51□□□□□ -0.41
TVP23B-208ENST00000575261 RARBP10826 455 aa12.51□□□□□ -0.41
TVP23B-208ENST00000575261 STAT3P40763 770 aa12.51□□□□□ -0.41
TVP23B-208ENST00000575261 LRRC41Q15345 812 aa12.51□□□□□ -0.41
TVP23B-208ENST00000575261 SBK1Q52WX2 424 aa12.51□□□□□ -0.41
TVP23B-208ENST00000575261 PRAMEF19Q5SWL8 479 aa12.51□□□□□ -0.41
TVP23B-208ENST00000575261 FAM83BQ5T0W9 1011 aa12.51□□□□□ -0.41
TVP23B-208ENST00000575261 GIMAP6Q6P9H5 292 aa12.51□□□□□ -0.41
TVP23B-208ENST00000575261 KBTBD3Q8NAB2 608 aa12.51□□□□□ -0.41
TVP23B-208ENST00000575261 STRBPQ96SI9 672 aaKnown RBP12.51□□□□□ -0.41
TVP23B-208ENST00000575261 PRDM5Q9NQX1 630 aaPredicted RBP12.51□□□□□ -0.41
TVP23B-208ENST00000575261 DIS3Q9Y2L1 958 aaKnown RBP12.51□□□□□ -0.41
TVP23B-208ENST00000575261 DLL1O00548 723 aa12.5□□□□□ -0.41
TVP23B-208ENST00000575261 PGK2P07205 417 aa12.5□□□□□ -0.41
TVP23B-208ENST00000575261 ADCYAP1R1P41586 468 aa12.5□□□□□ -0.41
TVP23B-208ENST00000575261 TRIM60Q495X7 471 aa12.5□□□□□ -0.41
TVP23B-208ENST00000575261 C20orf194Q5TEA3 1177 aa12.5□□□□□ -0.41
TVP23B-208ENST00000575261 C1orf53Q5VUE5 145 aa12.5□□□□□ -0.41
TVP23B-208ENST00000575261 REPS2Q8NFH8 660 aa12.5□□□□□ -0.41
TVP23B-208ENST00000575261 APPBP2Q92624 585 aa12.5□□□□□ -0.41
TVP23B-208ENST00000575261 SLF1Q9BQI6 1058 aa12.5□□□□□ -0.41
TVP23B-208ENST00000575261 TINF2Q9BSI4 451 aa12.5□□□□□ -0.41
TVP23B-208ENST00000575261 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.5□□□□□ -0.41
TVP23B-208ENST00000575261 TEX13BQ9BXU2 312 aa12.5□□□□□ -0.41
TVP23B-208ENST00000575261 MKNK2Q9HBH9 465 aa12.5□□□□□ -0.41
TVP23B-208ENST00000575261 XPNPEP3Q9NQH7 507 aa12.5□□□□□ -0.41
TVP23B-208ENST00000575261 MYH4Q9Y623 1939 aa12.5□□□□□ -0.41
TVP23B-208ENST00000575261 GSG1L2A8MUP6 293 aa12.49□□□□□ -0.41
TVP23B-208ENST00000575261 MINDY4BA8MYZ0 360 aa12.49□□□□□ -0.41
TVP23B-208ENST00000575261 ZFYP08048 801 aaPredicted RBP12.49□□□□□ -0.41
TVP23B-208ENST00000575261 GNAT2P19087 354 aa12.49□□□□□ -0.41
TVP23B-208ENST00000575261 RASA1P20936 1047 aa12.49□□□□□ -0.41
TVP23B-208ENST00000575261 ZNF792Q3KQV3 632 aa12.49□□□□□ -0.41
TVP23B-208ENST00000575261 FAM109BQ6ICB4 259 aaPredicted RBP12.49□□□□□ -0.41
TVP23B-208ENST00000575261 RNF180Q86T96 592 aa12.49□□□□□ -0.41
TVP23B-208ENST00000575261 FERMT2Q96AC1 680 aa12.49□□□□□ -0.41
TVP23B-208ENST00000575261 NUP88Q99567 741 aaPredicted RBP12.49□□□□□ -0.41
TVP23B-208ENST00000575261 ZNF287Q9HBT7 754 aa12.49□□□□□ -0.41
TVP23B-208ENST00000575261 PDLIM7Q9NR12 457 aa12.49□□□□□ -0.41
TVP23B-208ENST00000575261 NYAP2Q9P242 653 aa12.49□□□□□ -0.41
TVP23B-208ENST00000575261 PHF24Q9UPV7 400 aa12.49□□□□□ -0.41
TVP23B-208ENST00000575261 PRUNE2Q8WUY3 3088 aa12.49□□□□□ -0.41
TVP23B-208ENST00000575261 F5H6K3 240 aa12.48□□□□□ -0.41
TVP23B-208ENST00000575261 GPAA1O43292 621 aa12.48□□□□□ -0.41
TVP23B-208ENST00000575261 NDUFB10O96000 172 aa12.48□□□□□ -0.41
TVP23B-208ENST00000575261 AKR1A1P14550 325 aa12.48□□□□□ -0.41
TVP23B-208ENST00000575261 TDO2P48775 406 aa12.48□□□□□ -0.41
TVP23B-208ENST00000575261 KLRC3Q07444 240 aa12.48□□□□□ -0.41
TVP23B-208ENST00000575261 LRRFIP1Q32MZ4 808 aaKnown RBP12.48□□□□□ -0.41
TVP23B-208ENST00000575261 TSHZ3Q63HK5 1081 aa12.48□□□□□ -0.41
TVP23B-208ENST00000575261 SNRNP48Q6IEG0 339 aaKnown RBP12.48□□□□□ -0.41
TVP23B-208ENST00000575261 STK11IPQ8N1F8 1099 aa12.48□□□□□ -0.41
TVP23B-208ENST00000575261 MSL3Q8N5Y2 521 aaKnown RBP12.48□□□□□ -0.41
TVP23B-208ENST00000575261 OSBP2Q969R2 916 aa12.48□□□□□ -0.41
TVP23B-208ENST00000575261 EPB41L4AQ9HCS5 686 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms