RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 TRPV1Q8NER1 839 aa23.15■■□□□ 1.3
HCFC1R1-204ENST00000573095 EPB41L4AQ9HCS5 686 aaPredicted RBP23.15■■□□□ 1.3
HCFC1R1-204ENST00000573095 SLC5A4Q9NY91 659 aa23.15■■□□□ 1.3
HCFC1R1-204ENST00000573095 PCDHB15Q9Y5E8 787 aa23.15■■□□□ 1.3
HCFC1R1-204ENST00000573095 COBLO75128 1261 aa23.14■■□□□ 1.29
HCFC1R1-204ENST00000573095 SLC25A27O95847 323 aa23.14■■□□□ 1.29
HCFC1R1-204ENST00000573095 LRRFIP1Q32MZ4 808 aaKnown RBP23.14■■□□□ 1.29
HCFC1R1-204ENST00000573095 FBXO28Q9NVF7 368 aa23.14■■□□□ 1.29
HCFC1R1-204ENST00000573095 PPP1R9AQ9ULJ8 1098 aa23.14■■□□□ 1.29
HCFC1R1-204ENST00000573095 M0R2C6 588 aa23.13■■□□□ 1.29
HCFC1R1-204ENST00000573095 ERC2O15083 957 aa23.13■■□□□ 1.29
HCFC1R1-204ENST00000573095 CNGA1P29973 690 aa23.13■■□□□ 1.29
HCFC1R1-204ENST00000573095 LRRC26Q2I0M4 334 aa23.13■■□□□ 1.29
HCFC1R1-204ENST00000573095 PI4K2BQ8TCG2 481 aa23.13■■□□□ 1.29
HCFC1R1-204ENST00000573095 SZT2Q5T011 3432 aa23.13■■□□□ 1.29
HCFC1R1-204ENST00000573095 MINDY4BA8MYZ0 360 aa23.12■■□□□ 1.29
HCFC1R1-204ENST00000573095 DNM1LO00429 736 aa23.12■■□□□ 1.29
HCFC1R1-204ENST00000573095 SYN1P17600 705 aa23.12■■□□□ 1.29
HCFC1R1-204ENST00000573095 FAM83BQ5T0W9 1011 aa23.12■■□□□ 1.29
HCFC1R1-204ENST00000573095 SAMD1Q6SPF0 538 aaPredicted RBP23.12■■□□□ 1.29
HCFC1R1-204ENST00000573095 RIOX2Q8IUF8 465 aa23.12■■□□□ 1.29
HCFC1R1-204ENST00000573095 MKNK2Q9HBH9 465 aa23.12■■□□□ 1.29
HCFC1R1-204ENST00000573095 NYAP2Q9P242 653 aa23.12■■□□□ 1.29
HCFC1R1-204ENST00000573095 VWA5AO00534 786 aa23.11■■□□□ 1.29
HCFC1R1-204ENST00000573095 FCER1AP12319 257 aa23.11■■□□□ 1.29
HCFC1R1-204ENST00000573095 MAGEA10P43363 369 aaPredicted RBP23.11■■□□□ 1.29
HCFC1R1-204ENST00000573095 TDO2P48775 406 aa23.11■■□□□ 1.29
HCFC1R1-204ENST00000573095 REPS2Q8NFH8 660 aa23.11■■□□□ 1.29
HCFC1R1-204ENST00000573095 MAML3Q96JK9 1138 aa23.11■■□□□ 1.29
HCFC1R1-204ENST00000573095 ZNF214Q9UL59 606 aaPredicted RBP23.11■■□□□ 1.29
HCFC1R1-204ENST00000573095 PLIN4Q96Q06 1357 aa23.11■■□□□ 1.29
HCFC1R1-204ENST00000573095 IGKV6D-41A0A0C4DH26 115 aa23.1■■□□□ 1.29
HCFC1R1-204ENST00000573095 SEPT4O43236 478 aa23.1■■□□□ 1.29
HCFC1R1-204ENST00000573095 COPB2P35606 906 aa23.1■■□□□ 1.29
HCFC1R1-204ENST00000573095 RRP1P56182 461 aaKnown RBP23.1■■□□□ 1.29
HCFC1R1-204ENST00000573095 ZNF287Q9HBT7 754 aa23.1■■□□□ 1.29
HCFC1R1-204ENST00000573095 SOX1O00570 391 aaPredicted RBP23.09■■□□□ 1.29
HCFC1R1-204ENST00000573095 RAD21O60216 631 aa23.09■■□□□ 1.29
HCFC1R1-204ENST00000573095 STK11IPQ8N1F8 1099 aa23.09■■□□□ 1.29
HCFC1R1-204ENST00000573095 OTUD7AQ8TE49 926 aaPredicted RBP23.09■■□□□ 1.29
HCFC1R1-204ENST00000573095 MMP19Q99542 508 aa23.09■■□□□ 1.29
HCFC1R1-204ENST00000573095 SALL3Q9BXA9 1300 aa23.08■■□□□ 1.29
HCFC1R1-204ENST00000573095 LAMA3Q16787 3333 aa23.08■■□□□ 1.29
HCFC1R1-204ENST00000573095 LTBP2Q14767 1821 aa23.08■■□□□ 1.29
HCFC1R1-204ENST00000573095 PATL2C9JE40 543 aaKnown RBP23.08■■□□□ 1.29
HCFC1R1-204ENST00000573095 NDUFB10O96000 172 aa23.08■■□□□ 1.29
HCFC1R1-204ENST00000573095 APPP05067 770 aa23.08■■□□□ 1.29
HCFC1R1-204ENST00000573095 MX1P20591 662 aa23.08■■□□□ 1.29
HCFC1R1-204ENST00000573095 STAT3P40763 770 aa23.08■■□□□ 1.29
HCFC1R1-204ENST00000573095 IFNL3Q8IZI9 196 aa23.08■■□□□ 1.29
HCFC1R1-204ENST00000573095 SLF1Q9BQI6 1058 aa23.08■■□□□ 1.29
HCFC1R1-204ENST00000573095 FSD1Q9BTV5 496 aa23.08■■□□□ 1.29
HCFC1R1-204ENST00000573095 SENP6Q9GZR1 1112 aaPredicted RBP23.08■■□□□ 1.29
HCFC1R1-204ENST00000573095 NRBP1Q9UHY1 535 aa23.08■■□□□ 1.29
HCFC1R1-204ENST00000573095 SYNPO2Q9UMS6 1093 aa23.08■■□□□ 1.29
HCFC1R1-204ENST00000573095 F5H6K3 240 aa23.07■■□□□ 1.28
HCFC1R1-204ENST00000573095 KLRC3Q07444 240 aa23.07■■□□□ 1.28
HCFC1R1-204ENST00000573095 ZMYM1Q5SVZ6 1142 aa23.07■■□□□ 1.28
HCFC1R1-204ENST00000573095 SEC62Q99442 399 aaKnown RBP23.07■■□□□ 1.28
HCFC1R1-204ENST00000573095 NUP88Q99567 741 aaPredicted RBP23.07■■□□□ 1.28
HCFC1R1-204ENST00000573095 NACAP1Q9BZK3 213 aa23.07■■□□□ 1.28
HCFC1R1-204ENST00000573095 DIS3Q9Y2L1 958 aaKnown RBP23.07■■□□□ 1.28
HCFC1R1-204ENST00000573095 KCTD2Q14681 263 aa23.06■■□□□ 1.28
HCFC1R1-204ENST00000573095 TDHQ8IZJ6 230 aa23.06■■□□□ 1.28
HCFC1R1-204ENST00000573095 ARRDC4Q8NCT1 418 aa23.06■■□□□ 1.28
HCFC1R1-204ENST00000573095 PRDM1O75626 825 aa23.05■■□□□ 1.28
HCFC1R1-204ENST00000573095 ZNF792Q3KQV3 632 aa23.05■■□□□ 1.28
HCFC1R1-204ENST00000573095 ZNF444Q8N0Y2 327 aaPredicted RBP23.05■■□□□ 1.28
HCFC1R1-204ENST00000573095 MKL1Q969V6 931 aa23.05■■□□□ 1.28
HCFC1R1-204ENST00000573095 CEP95Q96GE4 821 aa23.05■■□□□ 1.28
HCFC1R1-204ENST00000573095 LRCH3Q96II8 777 aa23.05■■□□□ 1.28
HCFC1R1-204ENST00000573095 TEX13BQ9BXU2 312 aa23.05■■□□□ 1.28
HCFC1R1-204ENST00000573095 MTMR4Q9NYA4 1195 aa23.05■■□□□ 1.28
HCFC1R1-204ENST00000573095 KBTBD13C9JR72 458 aa23.04■■□□□ 1.28
HCFC1R1-204ENST00000573095 PGK2P07205 417 aa23.04■■□□□ 1.28
HCFC1R1-204ENST00000573095 LRIT3Q3SXY7 679 aa23.04■■□□□ 1.28
HCFC1R1-204ENST00000573095 PRAMEF19Q5SWL8 479 aa23.04■■□□□ 1.28
HCFC1R1-204ENST00000573095 GJC2Q5T442 439 aaPredicted RBP23.04■■□□□ 1.28
HCFC1R1-204ENST00000573095 ANO1Q5XXA6 986 aa23.04■■□□□ 1.28
HCFC1R1-204ENST00000573095 PRPF38AQ8NAV1 312 aaKnown RBP23.04■■□□□ 1.28
HCFC1R1-204ENST00000573095 UBE2OQ9C0C9 1292 aaKnown RBP23.04■■□□□ 1.28
HCFC1R1-204ENST00000573095 NAPBQ9H115 298 aa23.04■■□□□ 1.28
HCFC1R1-204ENST00000573095 CLIP2Q9UDT6 1046 aa23.04■■□□□ 1.28
HCFC1R1-204ENST00000573095 SMCHD1A6NHR9 2005 aa23.03■■□□□ 1.28
HCFC1R1-204ENST00000573095 ATP2A1O14983 1001 aa23.03■■□□□ 1.28
HCFC1R1-204ENST00000573095 TTLL1O95922 423 aa23.03■■□□□ 1.28
HCFC1R1-204ENST00000573095 ATN1P54259 1190 aaPredicted RBP23.03■■□□□ 1.28
HCFC1R1-204ENST00000573095 PDE4BQ07343 736 aa23.03■■□□□ 1.28
HCFC1R1-204ENST00000573095 FAM47AQ5JRC9 791 aa23.03■■□□□ 1.28
HCFC1R1-204ENST00000573095 SNRNP48Q6IEG0 339 aaKnown RBP23.03■■□□□ 1.28
HCFC1R1-204ENST00000573095 GMCL1P1Q8NEA9 526 aa23.03■■□□□ 1.28
HCFC1R1-204ENST00000573095 TINF2Q9BSI4 451 aa23.03■■□□□ 1.28
HCFC1R1-204ENST00000573095 SLC3A2P08195 630 aaKnown RBP23.02■■□□□ 1.28
HCFC1R1-204ENST00000573095 RTP1P59025 263 aa23.02■■□□□ 1.28
HCFC1R1-204ENST00000573095 PPARAQ07869 468 aa23.02■■□□□ 1.28
HCFC1R1-204ENST00000573095 GPR153Q6NV75 609 aa23.02■■□□□ 1.28
HCFC1R1-204ENST00000573095 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.02■■□□□ 1.28
HCFC1R1-204ENST00000573095 NEDD1Q8NHV4 660 aa23.02■■□□□ 1.28
HCFC1R1-204ENST00000573095 TSPY3P0CV98 308 aa23.01■■□□□ 1.27
HCFC1R1-204ENST00000573095 TSPY8P0CW00 308 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms