RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 MASTLQ96GX5 879 aa10.15□□□□□ -0.78
TVP23A-205ENST00000572428 DDX11L8A8MPP1 907 aa10.15□□□□□ -0.78
TVP23A-205ENST00000572428 MCM2P49736 904 aa10.15□□□□□ -0.78
TVP23A-205ENST00000572428 TIMM10P62072 90 aa10.15□□□□□ -0.78
TVP23A-205ENST00000572428 CNTROBQ8N137 903 aa10.15□□□□□ -0.78
TVP23A-205ENST00000572428 RPGRQ92834 1020 aaKnown RBP10.15□□□□□ -0.78
TVP23A-205ENST00000572428 ZSWIM4Q9H7M6 989 aa10.15□□□□□ -0.78
TVP23A-205ENST00000572428 PDS5AQ29RF7 1337 aaKnown RBP10.15□□□□□ -0.78
TVP23A-205ENST00000572428 TLDC2A0PJX2 215 aa10.15□□□□□ -0.79
TVP23A-205ENST00000572428 PABPN1LA6NDY0 278 aaKnown RBP10.15□□□□□ -0.79
TVP23A-205ENST00000572428 LDHAP00338 332 aaKnown RBP10.15□□□□□ -0.79
TVP23A-205ENST00000572428 ERCC5P28715 1186 aaPredicted RBP10.15□□□□□ -0.79
TVP23A-205ENST00000572428 ZNF131P52739 623 aa10.15□□□□□ -0.79
TVP23A-205ENST00000572428 SYCP2LQ5T4T6 812 aa10.15□□□□□ -0.79
TVP23A-205ENST00000572428 MSL1Q68DK7 614 aa10.15□□□□□ -0.79
TVP23A-205ENST00000572428 PDXDC1Q6P996 788 aa10.15□□□□□ -0.79
TVP23A-205ENST00000572428 SP8Q8IXZ3 490 aa10.15□□□□□ -0.79
TVP23A-205ENST00000572428 CCDC24Q8N4L8 307 aa10.15□□□□□ -0.79
TVP23A-205ENST00000572428 MYOCDQ8IZQ8 938 aa10.14□□□□□ -0.79
TVP23A-205ENST00000572428 ATRIPQ8WXE1 791 aa10.14□□□□□ -0.79
TVP23A-205ENST00000572428 CLIP3Q96DZ5 547 aa10.14□□□□□ -0.79
TVP23A-205ENST00000572428 TMEM87BQ96K49 555 aa10.14□□□□□ -0.79
TVP23A-205ENST00000572428 ZHX3Q9H4I2 956 aa10.14□□□□□ -0.79
TVP23A-205ENST00000572428 CHD4Q14839 1912 aa10.14□□□□□ -0.79
TVP23A-205ENST00000572428 CD2BP2O95400 341 aaKnown RBP10.14□□□□□ -0.79
TVP23A-205ENST00000572428 FGAP02671 866 aa10.14□□□□□ -0.79
TVP23A-205ENST00000572428 SLC5A1P13866 664 aa10.14□□□□□ -0.79
TVP23A-205ENST00000572428 RWDD2BP57060 319 aa10.14□□□□□ -0.79
TVP23A-205ENST00000572428 ANKRD20A12PQ8NF67 263 aa10.14□□□□□ -0.79
TVP23A-205ENST00000572428 HELQQ8TDG4 1101 aa10.14□□□□□ -0.79
TVP23A-205ENST00000572428 LEMD3Q9Y2U8 911 aa10.14□□□□□ -0.79
TVP23A-205ENST00000572428 LINC00854A0A1B0GVQ3 168 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 LRRC10BA6NIK2 292 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 PYGBP11216 843 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 TPP2P29144 1249 aaPredicted RBP10.13□□□□□ -0.79
TVP23A-205ENST00000572428 SESN3P58005 492 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 AMPD3Q01432 767 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 RAB3GAP1Q15042 981 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 TERF2Q15554 542 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 TSHZ3Q63HK5 1081 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 LILRB2Q8N423 598 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 TBC1D20Q96BZ9 403 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 GBP4Q96PP9 640 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.13□□□□□ -0.79
TVP23A-205ENST00000572428 NPHP1O15259 732 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 FGFR1OPO95684 399 aaKnown RBP10.13□□□□□ -0.79
TVP23A-205ENST00000572428 MYL1P05976 194 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 ADORA1P30542 326 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 HNRNPH2P55795 449 aaKnown RBP10.13□□□□□ -0.79
TVP23A-205ENST00000572428 KIF4BQ2VIQ3 1234 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.13□□□□□ -0.79
TVP23A-205ENST00000572428 XPO4Q9C0E2 1151 aaKnown RBP10.13□□□□□ -0.79
TVP23A-205ENST00000572428 RPAP3Q9H6T3 665 aaPredicted RBP10.13□□□□□ -0.79
TVP23A-205ENST00000572428 ATP6V0A2Q9Y487 856 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 RNASEH2AO75792 299 aaKnown RBP10.13□□□□□ -0.79
TVP23A-205ENST00000572428 TSPAN7P41732 249 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 XDHP47989 1333 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 GPSM2P81274 684 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 CCDC158Q5M9N0 1113 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 CCDC174Q6PII3 467 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 ZFPM2Q8WW38 1151 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 NELL2Q99435 816 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 CRACR2AQ9BSW2 395 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 DEF6Q9H4E7 631 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 GPCPD1Q9NPB8 672 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 SEL1LQ9UBV2 794 aa10.13□□□□□ -0.79
TVP23A-205ENST00000572428 UQCRFS1P1P0C7P4 283 aa10.12□□□□□ -0.79
TVP23A-205ENST00000572428 C7orf43Q8WVR3 580 aa10.12□□□□□ -0.79
TVP23A-205ENST00000572428 BHMTQ93088 406 aa10.12□□□□□ -0.79
TVP23A-205ENST00000572428 REPIN1Q9BWE0 567 aaKnown RBP10.12□□□□□ -0.79
TVP23A-205ENST00000572428 SENP2Q9HC62 589 aa10.12□□□□□ -0.79
TVP23A-205ENST00000572428 TAF5LO75529 589 aa10.12□□□□□ -0.79
TVP23A-205ENST00000572428 IFIT1P09914 478 aaKnown RBP10.12□□□□□ -0.79
TVP23A-205ENST00000572428 HOXC13P31276 330 aa10.12□□□□□ -0.79
TVP23A-205ENST00000572428 CCDC102BQ68D86 513 aa10.12□□□□□ -0.79
TVP23A-205ENST00000572428 ILDR2Q71H61 639 aa10.12□□□□□ -0.79
TVP23A-205ENST00000572428 FBXO33Q7Z6M2 555 aa10.12□□□□□ -0.79
TVP23A-205ENST00000572428 DCLK2Q8N568 766 aa10.12□□□□□ -0.79
TVP23A-205ENST00000572428 RUFY2Q8WXA3 655 aa10.12□□□□□ -0.79
TVP23A-205ENST00000572428 LAMA4Q16363 1823 aa10.12□□□□□ -0.79
TVP23A-205ENST00000572428 FOCADQ5VW36 1801 aa10.12□□□□□ -0.79
TVP23A-205ENST00000572428 KCNA3P22001 575 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 PIK3CAP42336 1068 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 PTGER2P43116 358 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 TGFB2P61812 414 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 NUCB2P80303 420 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 ACBD5Q5T8D3 534 aaPredicted RBP10.11□□□□□ -0.79
TVP23A-205ENST00000572428 SASS6Q6UVJ0 657 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 CLEC17AQ6ZS10 378 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 FILIP1Q7Z7B0 1213 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 VPS52Q8N1B4 723 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 GOLGA1Q92805 767 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 IER2Q9BTL4 223 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 ANKIB1Q9P2G1 1089 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 COL4A3BPQ9Y5P4 624 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 COL1A1P02452 1464 aaPredicted RBP10.11□□□□□ -0.79
TVP23A-205ENST00000572428 MED23Q9ULK4 1368 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 PPEF1O14829 653 aaPredicted RBP10.11□□□□□ -0.79
TVP23A-205ENST00000572428 NEBLO76041 1014 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 SERPINB4P48594 390 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms