RNA–Protein interactions for RNA: ENST00000570977.1

TOM1L1-208, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-208ENST00000570977 CHMP4BQ9H444 224 aaKnown RBP7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 RUBCNLQ9H714 662 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 ZFYVE28Q9HCC9 887 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 ZNF358Q9NW07 568 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 FZD1Q9UP38 647 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 PPP2R3BQ9Y5P8 575 aa7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 DDX60Q8IY21 1712 aaKnown RBP7.49□□□□□ -1.21
TOM1L1-208ENST00000570977 IRS4O14654 1257 aaPredicted RBP7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 CREB3O43889 395 aa7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 PEX14O75381 377 aa7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 USP2O75604 605 aaPredicted RBP7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 F11P03951 625 aa7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 GJB1P08034 283 aa7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 CAPN2P17655 700 aa7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 AIMP1Q12904 312 aaKnown RBP7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 MTFR1Q15390 333 aa7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 SUPT20HL1Q3ZLR7 823 aa7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 WDR44Q5JSH3 913 aa7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 ZFYVE27Q5T4F4 411 aa7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 TRIM50Q86XT4 487 aa7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 ZNF594Q96JF6 807 aaPredicted RBP7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 MXD3Q9BW11 206 aa7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 NUCKS1Q9H1E3 243 aaKnown RBP7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 SEC31BQ9NQW1 1179 aa7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 BABAM1Q9NWV8 329 aa7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 MTMR10Q9NXD2 777 aa7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 COL1A1P02452 1464 aaPredicted RBP7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 XDHP47989 1333 aa7.48□□□□□ -1.21
TOM1L1-208ENST00000570977 COL4A1P02462 1669 aa7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 A0A1B0GTH6 734 aa7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 A6NJY4 79 aa7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 SH3BP5O60239 455 aa7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 SASH1O94885 1247 aa7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 MSX1P28360 303 aa7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 IREB2P48200 963 aaKnown RBP7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 LACTBP83111 547 aaPredicted RBP7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 LRIT3Q3SXY7 679 aa7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 TBCELQ5QJ74 424 aa7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 SDR16C5Q8N3Y7 309 aa7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 DEFB123Q8N688 67 aa7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 PLBD2Q8NHP8 589 aa7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 COA1Q9GZY4 146 aa7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 JADE2Q9NQC1 790 aa7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 PRDM6Q9NQX0 595 aa7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 DNAAF2Q9NVR5 837 aaKnown RBP7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 STK17AQ9UEE5 414 aa7.47□□□□□ -1.21
TOM1L1-208ENST00000570977 LAMB1P07942 1786 aa7.46□□□□□ -1.21
TOM1L1-208ENST00000570977 H7C1W4 665 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 CCER2I3L3R5 266 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 TLR2O60603 784 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 PPFIA4O75335 1185 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 THBS1P07996 1170 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 ATP1A2P50993 1020 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 FOXD4Q12950 439 aaPredicted RBP7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 GAS6Q14393 721 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 KIF22Q14807 665 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 TAF1CQ15572 869 aaPredicted RBP7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 CCDC102BQ68D86 513 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 TTLL5Q6EMB2 1281 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 GIMAP6Q6P9H5 292 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 ZBTB38Q8NAP3 1195 aaPredicted RBP7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 BRI3BPQ8WY22 251 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 ANP32BQ92688 251 aaKnown RBP7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 PLEKHF1Q96S99 279 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 GDF15Q99988 308 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 NIFKQ9BYG3 293 aaKnown RBP7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 ARHGAP39Q9C0H5 1083 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 ZCCHC17Q9NP64 241 aaKnown RBP7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 STAP2Q9UGK3 403 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 ZNF804BA4D1E1 1349 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 SSC5DA1L4H1 1573 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 MED23Q9ULK4 1368 aa7.46□□□□□ -1.22
TOM1L1-208ENST00000570977 LAMA3Q16787 3333 aa7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 PSME4Q14997 1843 aa7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 BACH1O14867 736 aa7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 MAP4K4O95819 1239 aaPredicted RBP7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 GTF2A2P52657 109 aa7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 NFE2L2Q16236 605 aa7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 CCDC152Q4G0S7 254 aa7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 NBPF12Q5TAG4 269 aaPredicted RBP7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 ZNF662Q6ZS27 426 aa7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 FAM43AQ8N2R8 423 aa7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 PGBD3Q8N328 593 aa7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 CEP120Q8N960 986 aa7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 OPTNQ96CV9 577 aa7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 TSPYL4Q9UJ04 414 aa7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 IQSEC3Q9UPP2 1182 aaPredicted RBP7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 GNEQ9Y223 722 aaKnown RBP7.45□□□□□ -1.22
TOM1L1-208ENST00000570977 ZNF646O15015 1829 aaPredicted RBP7.44□□□□□ -1.22
TOM1L1-208ENST00000570977 CCL15-CCL14A0A0B4J2E2 113 aa7.44□□□□□ -1.22
TOM1L1-208ENST00000570977 SFI1A8K8P3 1242 aa7.44□□□□□ -1.22
TOM1L1-208ENST00000570977 PDE8AO60658 829 aa7.44□□□□□ -1.22
TOM1L1-208ENST00000570977 FARP2O94887 1054 aaPredicted RBP7.44□□□□□ -1.22
TOM1L1-208ENST00000570977 ZRANB2O95218 330 aaKnown RBP eCLIP7.44□□□□□ -1.22
TOM1L1-208ENST00000570977 SGPL1O95470 568 aa7.44□□□□□ -1.22
TOM1L1-208ENST00000570977 CCL5P13501 91 aa7.44□□□□□ -1.22
TOM1L1-208ENST00000570977 RASA1P20936 1047 aa7.44□□□□□ -1.22
TOM1L1-208ENST00000570977 GRK4P32298 578 aa7.44□□□□□ -1.22
TOM1L1-208ENST00000570977 ELOAQ14241 798 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms