RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 SMIM22K7EJ46 135 aa14.3□□□□□ -0.12
UBR1-206ENST00000566493 LRRFIP1Q32MZ4 808 aaKnown RBP14.3□□□□□ -0.12
UBR1-206ENST00000566493 OLFML2BQ68BL8 750 aa14.3□□□□□ -0.12
UBR1-206ENST00000566493 KBTBD3Q8NAB2 608 aa14.3□□□□□ -0.12
UBR1-206ENST00000566493 ATG4CQ96DT6 458 aa14.3□□□□□ -0.12
UBR1-206ENST00000566493 STRBPQ96SI9 672 aaKnown RBP14.3□□□□□ -0.12
UBR1-206ENST00000566493 GDF15Q99988 308 aa14.3□□□□□ -0.12
UBR1-206ENST00000566493 SENP6Q9GZR1 1112 aaPredicted RBP14.3□□□□□ -0.12
UBR1-206ENST00000566493 MKNK2Q9HBH9 465 aa14.3□□□□□ -0.12
UBR1-206ENST00000566493 RLFQ13129 1914 aa14.3□□□□□ -0.12
UBR1-206ENST00000566493 ZNF236Q9UL36 1845 aa14.29□□□□□ -0.12
UBR1-206ENST00000566493 RNF113AO15541 343 aaKnown RBP14.29□□□□□ -0.12
UBR1-206ENST00000566493 SLC25A27O95847 323 aa14.29□□□□□ -0.12
UBR1-206ENST00000566493 ZFYP08048 801 aaPredicted RBP14.29□□□□□ -0.12
UBR1-206ENST00000566493 FCER1AP12319 257 aa14.29□□□□□ -0.12
UBR1-206ENST00000566493 SBK1Q52WX2 424 aa14.29□□□□□ -0.12
UBR1-206ENST00000566493 GIMAP6Q6P9H5 292 aa14.29□□□□□ -0.12
UBR1-206ENST00000566493 ABRAQ8N0Z2 381 aa14.29□□□□□ -0.12
UBR1-206ENST00000566493 APPBP2Q92624 585 aa14.29□□□□□ -0.12
UBR1-206ENST00000566493 APPP05067 770 aa14.28□□□□□ -0.12
UBR1-206ENST00000566493 GNAT2P19087 354 aa14.28□□□□□ -0.12
UBR1-206ENST00000566493 MAGEA10P43363 369 aaPredicted RBP14.28□□□□□ -0.12
UBR1-206ENST00000566493 TMEM132BQ14DG7 1078 aa14.28□□□□□ -0.12
UBR1-206ENST00000566493 LRRC26Q2I0M4 334 aa14.28□□□□□ -0.12
UBR1-206ENST00000566493 STK11IPQ8N1F8 1099 aa14.28□□□□□ -0.12
UBR1-206ENST00000566493 ARRDC4Q8NCT1 418 aa14.28□□□□□ -0.12
UBR1-206ENST00000566493 UBE2OQ9C0C9 1292 aaKnown RBP14.28□□□□□ -0.12
UBR1-206ENST00000566493 ZNF287Q9HBT7 754 aa14.28□□□□□ -0.12
UBR1-206ENST00000566493 ZNFX1Q9P2E3 1918 aaKnown RBP14.27□□□□□ -0.12
UBR1-206ENST00000566493 PARP14Q460N5 1801 aa14.27□□□□□ -0.12
UBR1-206ENST00000566493 GSG1L2A8MUP6 293 aa14.27□□□□□ -0.13
UBR1-206ENST00000566493 DNM1LO00429 736 aa14.27□□□□□ -0.13
UBR1-206ENST00000566493 ERC2O15083 957 aa14.27□□□□□ -0.13
UBR1-206ENST00000566493 COBLO75128 1261 aa14.27□□□□□ -0.13
UBR1-206ENST00000566493 CYBAP13498 195 aa14.27□□□□□ -0.13
UBR1-206ENST00000566493 TDO2P48775 406 aa14.27□□□□□ -0.13
UBR1-206ENST00000566493 FAM83BQ5T0W9 1011 aa14.27□□□□□ -0.13
UBR1-206ENST00000566493 TSHZ3Q63HK5 1081 aa14.27□□□□□ -0.13
UBR1-206ENST00000566493 ZNF444Q8N0Y2 327 aaPredicted RBP14.27□□□□□ -0.13
UBR1-206ENST00000566493 TRPV1Q8NER1 839 aa14.27□□□□□ -0.13
UBR1-206ENST00000566493 OSBP2Q969R2 916 aa14.27□□□□□ -0.13
UBR1-206ENST00000566493 MMP19Q99542 508 aa14.27□□□□□ -0.13
UBR1-206ENST00000566493 FBXO28Q9NVF7 368 aa14.27□□□□□ -0.13
UBR1-206ENST00000566493 COL11A1P12107 1806 aaPredicted RBP14.27□□□□□ -0.13
UBR1-206ENST00000566493 TTC41PQ6P2S7 1318 aa14.26□□□□□ -0.13
UBR1-206ENST00000566493 KBTBD13C9JR72 458 aa14.26□□□□□ -0.13
UBR1-206ENST00000566493 VWA5AO00534 786 aa14.26□□□□□ -0.13
UBR1-206ENST00000566493 SEPT4O43236 478 aa14.26□□□□□ -0.13
UBR1-206ENST00000566493 GPAA1O43292 621 aa14.26□□□□□ -0.13
UBR1-206ENST00000566493 COPB2P35606 906 aa14.26□□□□□ -0.13
UBR1-206ENST00000566493 STAT3P40763 770 aa14.26□□□□□ -0.13
UBR1-206ENST00000566493 KCTD2Q14681 263 aa14.26□□□□□ -0.13
UBR1-206ENST00000566493 RIOX2Q8IUF8 465 aa14.26□□□□□ -0.13
UBR1-206ENST00000566493 TDHQ8IZJ6 230 aa14.26□□□□□ -0.13
UBR1-206ENST00000566493 MAML3Q96JK9 1138 aa14.26□□□□□ -0.13
UBR1-206ENST00000566493 ZBTB47Q9UFB7 747 aaPredicted RBP14.26□□□□□ -0.13
UBR1-206ENST00000566493 PPP1R9AQ9ULJ8 1098 aa14.26□□□□□ -0.13
UBR1-206ENST00000566493 ADAMTS5Q9UNA0 930 aa14.26□□□□□ -0.13
UBR1-206ENST00000566493 RANBP2P49792 3224 aaKnown RBP14.26□□□□□ -0.13
UBR1-206ENST00000566493 SOX1O00570 391 aaPredicted RBP14.25□□□□□ -0.13
UBR1-206ENST00000566493 IGHA2P01877 340 aa14.25□□□□□ -0.13
UBR1-206ENST00000566493 RASA1P20936 1047 aa14.25□□□□□ -0.13
UBR1-206ENST00000566493 ATN1P54259 1190 aaPredicted RBP14.25□□□□□ -0.13
UBR1-206ENST00000566493 PRAMEF19Q5SWL8 479 aa14.25□□□□□ -0.13
UBR1-206ENST00000566493 GJC2Q5T442 439 aaPredicted RBP14.25□□□□□ -0.13
UBR1-206ENST00000566493 ANO1Q5XXA6 986 aa14.25□□□□□ -0.13
UBR1-206ENST00000566493 LRCH3Q96II8 777 aa14.25□□□□□ -0.13
UBR1-206ENST00000566493 LBHD1Q9BQE6 289 aaPredicted RBP14.25□□□□□ -0.13
UBR1-206ENST00000566493 SLF1Q9BQI6 1058 aa14.25□□□□□ -0.13
UBR1-206ENST00000566493 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.25□□□□□ -0.13
UBR1-206ENST00000566493 NACAP1Q9BZK3 213 aa14.25□□□□□ -0.13
UBR1-206ENST00000566493 NYAP2Q9P242 653 aa14.25□□□□□ -0.13
UBR1-206ENST00000566493 PRKAG2Q9UGJ0 569 aa14.25□□□□□ -0.13
UBR1-206ENST00000566493 CTDP1Q9Y5B0 961 aaPredicted RBP14.25□□□□□ -0.13
UBR1-206ENST00000566493 ROBO3Q96MS0 1386 aa14.24□□□□□ -0.13
UBR1-206ENST00000566493 PATL2C9JE40 543 aaKnown RBP14.24□□□□□ -0.13
UBR1-206ENST00000566493 F5H6K3 240 aa14.24□□□□□ -0.13
UBR1-206ENST00000566493 M0R2C6 588 aa14.24□□□□□ -0.13
UBR1-206ENST00000566493 SLC3A2P08195 630 aaKnown RBP14.24□□□□□ -0.13
UBR1-206ENST00000566493 CD44P16070 742 aaKnown RBP14.24□□□□□ -0.13
UBR1-206ENST00000566493 MDM2Q00987 491 aaPredicted RBP14.24□□□□□ -0.13
UBR1-206ENST00000566493 KLRC3Q07444 240 aa14.24□□□□□ -0.13
UBR1-206ENST00000566493 FSD1Q9BTV5 496 aa14.24□□□□□ -0.13
UBR1-206ENST00000566493 CLIP2Q9UDT6 1046 aa14.24□□□□□ -0.13
UBR1-206ENST00000566493 GREB1LQ9C091 1923 aaPredicted RBP14.23□□□□□ -0.13
UBR1-206ENST00000566493 SZT2Q5T011 3432 aa14.23□□□□□ -0.13
UBR1-206ENST00000566493 PGK2P07205 417 aa14.23□□□□□ -0.13
UBR1-206ENST00000566493 PDE4BQ07343 736 aa14.23□□□□□ -0.13
UBR1-206ENST00000566493 LRIT3Q3SXY7 679 aa14.23□□□□□ -0.13
UBR1-206ENST00000566493 GPR153Q6NV75 609 aa14.23□□□□□ -0.13
UBR1-206ENST00000566493 IFNL3Q8IZI9 196 aa14.23□□□□□ -0.13
UBR1-206ENST00000566493 PRPF38AQ8NAV1 312 aaKnown RBP14.23□□□□□ -0.13
UBR1-206ENST00000566493 NUP88Q99567 741 aaPredicted RBP14.23□□□□□ -0.13
UBR1-206ENST00000566493 TINF2Q9BSI4 451 aa14.23□□□□□ -0.13
UBR1-206ENST00000566493 TEX13BQ9BXU2 312 aa14.23□□□□□ -0.13
UBR1-206ENST00000566493 NRBP1Q9UHY1 535 aa14.23□□□□□ -0.13
UBR1-206ENST00000566493 ZNF214Q9UL59 606 aaPredicted RBP14.23□□□□□ -0.13
UBR1-206ENST00000566493 DIS3Q9Y2L1 958 aaKnown RBP14.23□□□□□ -0.13
UBR1-206ENST00000566493 PCDHB15Q9Y5E8 787 aa14.23□□□□□ -0.13
UBR1-206ENST00000566493 MYH4Q9Y623 1939 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms