RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 RAD21O60216 631 aa19.83■□□□□ 0.77
TSR3-202ENST00000566296 MYCNP04198 464 aaPredicted RBP19.83■□□□□ 0.77
TSR3-202ENST00000566296 EEF2P13639 858 aaKnown RBP19.83■□□□□ 0.77
TSR3-202ENST00000566296 ANO1Q5XXA6 986 aa19.83■□□□□ 0.77
TSR3-202ENST00000566296 Q7L0L9 218 aa19.83■□□□□ 0.77
TSR3-202ENST00000566296 SIAH1Q8IUQ4 282 aa19.83■□□□□ 0.77
TSR3-202ENST00000566296 ATP11BQ9Y2G3 1177 aa19.83■□□□□ 0.77
TSR3-202ENST00000566296 LTBP2Q14767 1821 aa19.82■□□□□ 0.76
TSR3-202ENST00000566296 CHGBP05060 677 aa19.82■□□□□ 0.76
TSR3-202ENST00000566296 COPB2P35606 906 aa19.82■□□□□ 0.76
TSR3-202ENST00000566296 TMEM132BQ14DG7 1078 aa19.82■□□□□ 0.76
TSR3-202ENST00000566296 MAML3Q96JK9 1138 aa19.82■□□□□ 0.76
TSR3-202ENST00000566296 MMP19Q99542 508 aa19.82■□□□□ 0.76
TSR3-202ENST00000566296 SMIM22K7EJ46 135 aa19.81■□□□□ 0.76
TSR3-202ENST00000566296 CTR9Q6PD62 1173 aa19.81■□□□□ 0.76
TSR3-202ENST00000566296 RIOX2Q8IUF8 465 aa19.81■□□□□ 0.76
TSR3-202ENST00000566296 PUS7LQ9H0K6 701 aaKnown RBP19.81■□□□□ 0.76
TSR3-202ENST00000566296 NRBP1Q9UHY1 535 aa19.81■□□□□ 0.76
TSR3-202ENST00000566296 PPP1R9AQ9ULJ8 1098 aa19.81■□□□□ 0.76
TSR3-202ENST00000566296 STXBP5LQ9Y2K9 1186 aa19.81■□□□□ 0.76
TSR3-202ENST00000566296 PLXNA1Q9UIW2 1896 aa19.81■□□□□ 0.76
TSR3-202ENST00000566296 GREB1LQ9C091 1923 aaPredicted RBP19.8■□□□□ 0.76
TSR3-202ENST00000566296 KCTD2Q14681 263 aa19.8■□□□□ 0.76
TSR3-202ENST00000566296 PRAMEF19Q5SWL8 479 aa19.8■□□□□ 0.76
TSR3-202ENST00000566296 GPATCH3Q96I76 525 aa19.8■□□□□ 0.76
TSR3-202ENST00000566296 PRDM5Q9NQX1 630 aaPredicted RBP19.8■□□□□ 0.76
TSR3-202ENST00000566296 ECHDC1Q9NTX5 307 aa19.8■□□□□ 0.76
TSR3-202ENST00000566296 FBXO28Q9NVF7 368 aa19.8■□□□□ 0.76
TSR3-202ENST00000566296 SMARCA5O60264 1052 aaPredicted RBP19.79■□□□□ 0.76
TSR3-202ENST00000566296 RARBP10826 455 aa19.79■□□□□ 0.76
TSR3-202ENST00000566296 FAM47AQ5JRC9 791 aa19.79■□□□□ 0.76
TSR3-202ENST00000566296 FAM83BQ5T0W9 1011 aa19.79■□□□□ 0.76
TSR3-202ENST00000566296 SLC39A5Q6ZMH5 540 aa19.79■□□□□ 0.76
TSR3-202ENST00000566296 MTMR10Q9NXD2 777 aa19.79■□□□□ 0.76
TSR3-202ENST00000566296 ADAMTS5Q9UNA0 930 aa19.79■□□□□ 0.76
TSR3-202ENST00000566296 SMCHD1A6NHR9 2005 aa19.78■□□□□ 0.76
TSR3-202ENST00000566296 VWA5AO00534 786 aa19.78■□□□□ 0.76
TSR3-202ENST00000566296 DLL1O00548 723 aa19.78■□□□□ 0.76
TSR3-202ENST00000566296 STAT3P40763 770 aa19.78■□□□□ 0.76
TSR3-202ENST00000566296 LRRC41Q15345 812 aa19.78■□□□□ 0.76
TSR3-202ENST00000566296 TRIM60Q495X7 471 aa19.78■□□□□ 0.76
TSR3-202ENST00000566296 MKNK2Q9HBH9 465 aa19.78■□□□□ 0.76
TSR3-202ENST00000566296 ROBO3Q96MS0 1386 aa19.78■□□□□ 0.76
TSR3-202ENST00000566296 SNX17Q15036 470 aa19.77■□□□□ 0.76
TSR3-202ENST00000566296 SBK1Q52WX2 424 aa19.77■□□□□ 0.76
TSR3-202ENST00000566296 GIMAP6Q6P9H5 292 aa19.77■□□□□ 0.76
TSR3-202ENST00000566296 KBTBD3Q8NAB2 608 aa19.77■□□□□ 0.76
TSR3-202ENST00000566296 APPBP2Q92624 585 aa19.77■□□□□ 0.76
TSR3-202ENST00000566296 STRBPQ96SI9 672 aaKnown RBP19.77■□□□□ 0.76
TSR3-202ENST00000566296 SLF1Q9BQI6 1058 aa19.77■□□□□ 0.76
TSR3-202ENST00000566296 TINF2Q9BSI4 451 aa19.77■□□□□ 0.76
TSR3-202ENST00000566296 XPNPEP3Q9NQH7 507 aa19.77■□□□□ 0.76
TSR3-202ENST00000566296 ZNF214Q9UL59 606 aaPredicted RBP19.77■□□□□ 0.76
TSR3-202ENST00000566296 DIS3Q9Y2L1 958 aaKnown RBP19.77■□□□□ 0.76
TSR3-202ENST00000566296 MYH4Q9Y623 1939 aa19.76■□□□□ 0.75
TSR3-202ENST00000566296 PGK2P07205 417 aa19.76■□□□□ 0.75
TSR3-202ENST00000566296 ADCYAP1R1P41586 468 aa19.76■□□□□ 0.75
TSR3-202ENST00000566296 STK11IPQ8N1F8 1099 aa19.76■□□□□ 0.75
TSR3-202ENST00000566296 FERMT2Q96AC1 680 aa19.76■□□□□ 0.75
TSR3-202ENST00000566296 MINDY4BA8MYZ0 360 aa19.75■□□□□ 0.75
TSR3-202ENST00000566296 RASA1P20936 1047 aa19.75■□□□□ 0.75
TSR3-202ENST00000566296 ZNF792Q3KQV3 632 aa19.75■□□□□ 0.75
TSR3-202ENST00000566296 C20orf194Q5TEA3 1177 aa19.75■□□□□ 0.75
TSR3-202ENST00000566296 FAM109BQ6ICB4 259 aaPredicted RBP19.75■□□□□ 0.75
TSR3-202ENST00000566296 RNF180Q86T96 592 aa19.75■□□□□ 0.75
TSR3-202ENST00000566296 REPS2Q8NFH8 660 aa19.75■□□□□ 0.75
TSR3-202ENST00000566296 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.75■□□□□ 0.75
TSR3-202ENST00000566296 TEX13BQ9BXU2 312 aa19.75■□□□□ 0.75
TSR3-202ENST00000566296 ZNF287Q9HBT7 754 aa19.75■□□□□ 0.75
TSR3-202ENST00000566296 PDLIM7Q9NR12 457 aa19.75■□□□□ 0.75
TSR3-202ENST00000566296 NYAP2Q9P242 653 aa19.75■□□□□ 0.75
TSR3-202ENST00000566296 CNPY2Q9Y2B0 182 aa19.75■□□□□ 0.75
TSR3-202ENST00000566296 CTDP1Q9Y5B0 961 aaPredicted RBP19.75■□□□□ 0.75
TSR3-202ENST00000566296 COL6A3P12111 3177 aa19.75■□□□□ 0.75
TSR3-202ENST00000566296 CUL9Q8IWT3 2517 aa19.74■□□□□ 0.75
TSR3-202ENST00000566296 GSG1L2A8MUP6 293 aa19.74■□□□□ 0.75
TSR3-202ENST00000566296 ZFYP08048 801 aaPredicted RBP19.74■□□□□ 0.75
TSR3-202ENST00000566296 AKR1A1P14550 325 aa19.74■□□□□ 0.75
TSR3-202ENST00000566296 TDO2P48775 406 aa19.74■□□□□ 0.75
TSR3-202ENST00000566296 LRRFIP1Q32MZ4 808 aaKnown RBP19.74■□□□□ 0.75
TSR3-202ENST00000566296 ZNF697Q5TEC3 545 aa19.74■□□□□ 0.75
TSR3-202ENST00000566296 C1orf53Q5VUE5 145 aa19.74■□□□□ 0.75
TSR3-202ENST00000566296 SNRNP48Q6IEG0 339 aaKnown RBP19.74■□□□□ 0.75
TSR3-202ENST00000566296 NUP88Q99567 741 aaPredicted RBP19.74■□□□□ 0.75
TSR3-202ENST00000566296 PHF24Q9UPV7 400 aa19.74■□□□□ 0.75
TSR3-202ENST00000566296 RNF113AO15541 343 aaKnown RBP19.73■□□□□ 0.75
TSR3-202ENST00000566296 GPAA1O43292 621 aa19.73■□□□□ 0.75
TSR3-202ENST00000566296 NDUFB10O96000 172 aa19.73■□□□□ 0.75
TSR3-202ENST00000566296 GNAT2P19087 354 aa19.73■□□□□ 0.75
TSR3-202ENST00000566296 OSBP2Q969R2 916 aa19.73■□□□□ 0.75
TSR3-202ENST00000566296 F5H6K3 240 aa19.72■□□□□ 0.75
TSR3-202ENST00000566296 PGK1P00558 417 aa19.72■□□□□ 0.75
TSR3-202ENST00000566296 CENPBP07199 599 aaPredicted RBP19.72■□□□□ 0.75
TSR3-202ENST00000566296 KLRC3Q07444 240 aa19.72■□□□□ 0.75
TSR3-202ENST00000566296 ZNF444Q8N0Y2 327 aaPredicted RBP19.72■□□□□ 0.75
TSR3-202ENST00000566296 MSL3Q8N5Y2 521 aaKnown RBP19.72■□□□□ 0.75
TSR3-202ENST00000566296 BADQ92934 168 aa19.72■□□□□ 0.75
TSR3-202ENST00000566296 DDX11Q96FC9 970 aa19.72■□□□□ 0.75
TSR3-202ENST00000566296 ZBED4O75132 1171 aa19.71■□□□□ 0.75
TSR3-202ENST00000566296 APPP05067 770 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms