RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 TICAM2Q86XR7 235 aa17.92■□□□□ 0.46
SPG7-210ENST00000564409 RBM27Q9P2N5 1060 aaKnown RBP17.92■□□□□ 0.46
SPG7-210ENST00000564409 COL6A1P12109 1028 aa17.91■□□□□ 0.46
SPG7-210ENST00000564409 PLS1Q14651 629 aa17.91■□□□□ 0.46
SPG7-210ENST00000564409 ZNF444Q8N0Y2 327 aaPredicted RBP17.91■□□□□ 0.46
SPG7-210ENST00000564409 NPLOC4Q8TAT6 608 aa17.91■□□□□ 0.46
SPG7-210ENST00000564409 ATG4CQ96DT6 458 aa17.91■□□□□ 0.46
SPG7-210ENST00000564409 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.91■□□□□ 0.46
SPG7-210ENST00000564409 FLRT1Q9NZU1 646 aa17.91■□□□□ 0.46
SPG7-210ENST00000564409 SLC3A2P08195 630 aaKnown RBP17.9■□□□□ 0.46
SPG7-210ENST00000564409 FCER1AP12319 257 aa17.9■□□□□ 0.46
SPG7-210ENST00000564409 PDE4BQ07343 736 aa17.9■□□□□ 0.46
SPG7-210ENST00000564409 HDAC1Q13547 482 aaPredicted RBP17.9■□□□□ 0.46
SPG7-210ENST00000564409 ZMYM1Q5SVZ6 1142 aa17.9■□□□□ 0.46
SPG7-210ENST00000564409 NCAPG2Q86XI2 1143 aa17.9■□□□□ 0.46
SPG7-210ENST00000564409 RIOX2Q8IUF8 465 aa17.9■□□□□ 0.46
SPG7-210ENST00000564409 IFNL3Q8IZI9 196 aa17.9■□□□□ 0.46
SPG7-210ENST00000564409 FSD1Q9BTV5 496 aa17.9■□□□□ 0.46
SPG7-210ENST00000564409 DDX20Q9UHI6 824 aaKnown RBP17.9■□□□□ 0.46
SPG7-210ENST00000564409 PPP1R9AQ9ULJ8 1098 aa17.9■□□□□ 0.46
SPG7-210ENST00000564409 M0R2C6 588 aa17.89■□□□□ 0.45
SPG7-210ENST00000564409 VWA5AO00534 786 aa17.89■□□□□ 0.45
SPG7-210ENST00000564409 TMEM132BQ14DG7 1078 aa17.89■□□□□ 0.45
SPG7-210ENST00000564409 PPP4R3BQ5MIZ7 849 aa17.89■□□□□ 0.45
SPG7-210ENST00000564409 MKL1Q969V6 931 aa17.89■□□□□ 0.45
SPG7-210ENST00000564409 EPB41L4AQ9HCS5 686 aaPredicted RBP17.89■□□□□ 0.45
SPG7-210ENST00000564409 NRBP1Q9UHY1 535 aa17.89■□□□□ 0.45
SPG7-210ENST00000564409 CYBAP13498 195 aa17.88■□□□□ 0.45
SPG7-210ENST00000564409 CYP2C19P33261 490 aa17.88■□□□□ 0.45
SPG7-210ENST00000564409 BMP8BP34820 402 aa17.88■□□□□ 0.45
SPG7-210ENST00000564409 STAT3P40763 770 aa17.88■□□□□ 0.45
SPG7-210ENST00000564409 NAPBQ9H115 298 aa17.88■□□□□ 0.45
SPG7-210ENST00000564409 STAP2Q9UGK3 403 aa17.88■□□□□ 0.45
SPG7-210ENST00000564409 DIS3Q9Y2L1 958 aaKnown RBP17.88■□□□□ 0.45
SPG7-210ENST00000564409 PFASO15067 1338 aa17.88■□□□□ 0.45
SPG7-210ENST00000564409 SALL3Q9BXA9 1300 aa17.88■□□□□ 0.45
SPG7-210ENST00000564409 PLXNA1Q9UIW2 1896 aa17.88■□□□□ 0.45
SPG7-210ENST00000564409 IGKV6D-41A0A0C4DH26 115 aa17.87■□□□□ 0.45
SPG7-210ENST00000564409 F5H6K3 240 aa17.87■□□□□ 0.45
SPG7-210ENST00000564409 COBLO75128 1261 aa17.87■□□□□ 0.45
SPG7-210ENST00000564409 CNGA1P29973 690 aa17.87■□□□□ 0.45
SPG7-210ENST00000564409 KLRC3Q07444 240 aa17.87■□□□□ 0.45
SPG7-210ENST00000564409 FAM83BQ5T0W9 1011 aa17.87■□□□□ 0.45
SPG7-210ENST00000564409 ANKRD45Q5TZF3 282 aa17.87■□□□□ 0.45
SPG7-210ENST00000564409 C7orf61Q8IZ16 206 aa17.87■□□□□ 0.45
SPG7-210ENST00000564409 PRPF38AQ8NAV1 312 aaKnown RBP17.87■□□□□ 0.45
SPG7-210ENST00000564409 ARRDC4Q8NCT1 418 aa17.87■□□□□ 0.45
SPG7-210ENST00000564409 OTUD7AQ8TE49 926 aaPredicted RBP17.87■□□□□ 0.45
SPG7-210ENST00000564409 EVI5LQ96CN4 794 aa17.87■□□□□ 0.45
SPG7-210ENST00000564409 SLF1Q9BQI6 1058 aa17.87■□□□□ 0.45
SPG7-210ENST00000564409 FBXO28Q9NVF7 368 aa17.87■□□□□ 0.45
SPG7-210ENST00000564409 MTMR4Q9NYA4 1195 aa17.87■□□□□ 0.45
SPG7-210ENST00000564409 PLIN4Q96Q06 1357 aa17.87■□□□□ 0.45
SPG7-210ENST00000564409 DNM1LO00429 736 aa17.86■□□□□ 0.45
SPG7-210ENST00000564409 SEPT4O43236 478 aa17.86■□□□□ 0.45
SPG7-210ENST00000564409 RAD21O60216 631 aa17.86■□□□□ 0.45
SPG7-210ENST00000564409 TTLL1O95922 423 aa17.86■□□□□ 0.45
SPG7-210ENST00000564409 KCTD2Q14681 263 aa17.86■□□□□ 0.45
SPG7-210ENST00000564409 SAMD1Q6SPF0 538 aaPredicted RBP17.86■□□□□ 0.45
SPG7-210ENST00000564409 NEDD1Q8NHV4 660 aa17.86■□□□□ 0.45
SPG7-210ENST00000564409 MAML3Q96JK9 1138 aa17.86■□□□□ 0.45
SPG7-210ENST00000564409 CRBNQ96SW2 442 aa17.86■□□□□ 0.45
SPG7-210ENST00000564409 MMP19Q99542 508 aa17.86■□□□□ 0.45
SPG7-210ENST00000564409 CLIP2Q9UDT6 1046 aa17.86■□□□□ 0.45
SPG7-210ENST00000564409 ZNF214Q9UL59 606 aaPredicted RBP17.86■□□□□ 0.45
SPG7-210ENST00000564409 ATP2A1O14983 1001 aa17.85■□□□□ 0.45
SPG7-210ENST00000564409 NDUFB10O96000 172 aa17.85■□□□□ 0.45
SPG7-210ENST00000564409 FDX1P10109 184 aa17.85■□□□□ 0.45
SPG7-210ENST00000564409 GMCL1P1Q8NEA9 526 aa17.85■□□□□ 0.45
SPG7-210ENST00000564409 TRPV1Q8NER1 839 aa17.85■□□□□ 0.45
SPG7-210ENST00000564409 REPS2Q8NFH8 660 aa17.85■□□□□ 0.45
SPG7-210ENST00000564409 CEP95Q96GE4 821 aa17.85■□□□□ 0.45
SPG7-210ENST00000564409 GDF15Q99988 308 aa17.85■□□□□ 0.45
SPG7-210ENST00000564409 TEX13BQ9BXU2 312 aa17.85■□□□□ 0.45
SPG7-210ENST00000564409 SMCHD1A6NHR9 2005 aa17.84■□□□□ 0.45
SPG7-210ENST00000564409 TSPY3P0CV98 308 aa17.84■□□□□ 0.45
SPG7-210ENST00000564409 TSPY8P0CW00 308 aa17.84■□□□□ 0.45
SPG7-210ENST00000564409 PPARAQ07869 468 aa17.84■□□□□ 0.45
SPG7-210ENST00000564409 STK11IPQ8N1F8 1099 aa17.84■□□□□ 0.45
SPG7-210ENST00000564409 MSL3Q8N5Y2 521 aaKnown RBP17.84■□□□□ 0.45
SPG7-210ENST00000564409 SEC62Q99442 399 aaKnown RBP17.84■□□□□ 0.45
SPG7-210ENST00000564409 HELLSQ9NRZ9 838 aa17.84■□□□□ 0.45
SPG7-210ENST00000564409 FEM1BQ9UK73 627 aa17.84■□□□□ 0.45
SPG7-210ENST00000564409 ZBED4O75132 1171 aa17.83■□□□□ 0.44
SPG7-210ENST00000564409 PRDM1O75626 825 aa17.83■□□□□ 0.44
SPG7-210ENST00000564409 OAZ1P54368 228 aa17.83■□□□□ 0.44
SPG7-210ENST00000564409 PDE1AP54750 535 aa17.83■□□□□ 0.44
SPG7-210ENST00000564409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.83■□□□□ 0.44
SPG7-210ENST00000564409 SENP6Q9GZR1 1112 aaPredicted RBP17.83■□□□□ 0.44
SPG7-210ENST00000564409 CTDP1Q9Y5B0 961 aaPredicted RBP17.83■□□□□ 0.44
SPG7-210ENST00000564409 KBTBD13C9JR72 458 aa17.82■□□□□ 0.44
SPG7-210ENST00000564409 ALX1Q15699 326 aa17.82■□□□□ 0.44
SPG7-210ENST00000564409 LRRC26Q2I0M4 334 aa17.82■□□□□ 0.44
SPG7-210ENST00000564409 ZNF792Q3KQV3 632 aa17.82■□□□□ 0.44
SPG7-210ENST00000564409 NUP88Q99567 741 aaPredicted RBP17.82■□□□□ 0.44
SPG7-210ENST00000564409 TINF2Q9BSI4 451 aa17.82■□□□□ 0.44
SPG7-210ENST00000564409 FBXO40Q9UH90 709 aa17.82■□□□□ 0.44
SPG7-210ENST00000564409 ZMYND8Q9ULU4 1186 aaPredicted RBP17.82■□□□□ 0.44
SPG7-210ENST00000564409 TFAP4Q01664 338 aa17.81■□□□□ 0.44
SPG7-210ENST00000564409 SNRNP48Q6IEG0 339 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms