RNA–Protein interactions for RNA: ENST00000563332.6

CDIP1-205, Transcript of cell death inducing p53 target 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDIP1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-205ENST00000563332 SHROOM1Q2M3G4 852 aaPredicted RBP16.5■□□□□ 0.23
CDIP1-205ENST00000563332 BLIDQ8IZY5 108 aa16.5■□□□□ 0.23
CDIP1-205ENST00000563332 MAPK8IP1Q9UQF2 711 aa16.5■□□□□ 0.23
CDIP1-205ENST00000563332 KLRF2D3W0D1 207 aa16.5■□□□□ 0.23
CDIP1-205ENST00000563332 BBOX1O75936 387 aa16.5■□□□□ 0.23
CDIP1-205ENST00000563332 GRM4Q14833 912 aa16.5■□□□□ 0.23
CDIP1-205ENST00000563332 DGKHQ86XP1 1220 aa16.5■□□□□ 0.23
CDIP1-205ENST00000563332 TMEM60Q9H2L4 133 aa16.5■□□□□ 0.23
CDIP1-205ENST00000563332 DBNDD1Q9H9R9 158 aa16.5■□□□□ 0.23
CDIP1-205ENST00000563332 SNED1Q8TER0 1413 aa16.5■□□□□ 0.23
CDIP1-205ENST00000563332 USP17L5A8MUK1 530 aa16.49■□□□□ 0.23
CDIP1-205ENST00000563332 HSP90AA2PQ14568 343 aaPredicted RBP16.49■□□□□ 0.23
CDIP1-205ENST00000563332 NAV1Q8NEY1 1877 aa16.49■□□□□ 0.23
CDIP1-205ENST00000563332 IKBKBO14920 756 aa16.49■□□□□ 0.23
CDIP1-205ENST00000563332 APBA3O96018 575 aa16.49■□□□□ 0.23
CDIP1-205ENST00000563332 MMP10P09238 476 aa16.49■□□□□ 0.23
CDIP1-205ENST00000563332 ATP2B2Q01814 1243 aa16.49■□□□□ 0.23
CDIP1-205ENST00000563332 MORC3Q14149 939 aa16.49■□□□□ 0.23
CDIP1-205ENST00000563332 CREBRFQ8IUR6 639 aa16.49■□□□□ 0.23
CDIP1-205ENST00000563332 ZNF622Q969S3 477 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDIP1-205ENST00000563332 UIMC1Q96RL1 719 aa16.49■□□□□ 0.23
CDIP1-205ENST00000563332 TTF2Q9UNY4 1162 aaKnown RBP16.49■□□□□ 0.23
CDIP1-205ENST00000563332 RAD21O60216 631 aa16.49■□□□□ 0.23
CDIP1-205ENST00000563332 CDK11BP21127 795 aaKnown RBP16.49■□□□□ 0.23
CDIP1-205ENST00000563332 DPYDQ12882 1025 aa16.49■□□□□ 0.23
CDIP1-205ENST00000563332 KARSQ15046 597 aaKnown RBP16.49■□□□□ 0.23
CDIP1-205ENST00000563332 ZNF579Q8NAF0 562 aaKnown RBP16.49■□□□□ 0.23
CDIP1-205ENST00000563332 ATP2C1P98194 919 aaPredicted RBP16.48■□□□□ 0.23
CDIP1-205ENST00000563332 SLC27A3Q5K4L6 730 aa16.48■□□□□ 0.23
CDIP1-205ENST00000563332 MTRQ99707 1265 aa16.48■□□□□ 0.23
CDIP1-205ENST00000563332 SFPQP23246 707 aaKnown RBP eCLIP16.48■□□□□ 0.231e-6■■■■■ 29
CDIP1-205ENST00000563332 SARSP49591 514 aaKnown RBP16.48■□□□□ 0.23
CDIP1-205ENST00000563332 PCDHA6Q9UN73 950 aa16.48■□□□□ 0.23
CDIP1-205ENST00000563332 PCDHA8Q9Y5H6 950 aa16.48■□□□□ 0.23
CDIP1-205ENST00000563332 CDK5RAP2Q96SN8 1893 aa16.47■□□□□ 0.23
CDIP1-205ENST00000563332 STXBP3O00186 592 aa16.47■□□□□ 0.23
CDIP1-205ENST00000563332 AKR1B1P15121 316 aa16.47■□□□□ 0.23
CDIP1-205ENST00000563332 HOXA10P31260 410 aaPredicted RBP16.47■□□□□ 0.23
CDIP1-205ENST00000563332 CUL4BQ13620 913 aa16.47■□□□□ 0.23
CDIP1-205ENST00000563332 DPP8Q6V1X1 898 aaPredicted RBP16.47■□□□□ 0.23
CDIP1-205ENST00000563332 C16orf86Q6ZW13 317 aa16.47■□□□□ 0.23
CDIP1-205ENST00000563332 ZFPM1Q8IX07 1006 aa16.47■□□□□ 0.23
CDIP1-205ENST00000563332 PIGSQ96S52 555 aa16.47■□□□□ 0.23
CDIP1-205ENST00000563332 ZC3H12CQ9C0D7 883 aaKnown RBP16.47■□□□□ 0.23
CDIP1-205ENST00000563332 HOOK1Q9UJC3 728 aaKnown RBP16.47■□□□□ 0.23
CDIP1-205ENST00000563332 PCDHA4Q9UN74 947 aa16.47■□□□□ 0.23
CDIP1-205ENST00000563332 DDX60LQ5H9U9 1706 aaKnown RBP16.47■□□□□ 0.23
CDIP1-205ENST00000563332 CCDC194A0A1B0GVG4 234 aa16.47■□□□□ 0.23
CDIP1-205ENST00000563332 TERF1P54274 439 aa16.47■□□□□ 0.23
CDIP1-205ENST00000563332 ZNF710Q8N1W2 664 aa16.47■□□□□ 0.23
CDIP1-205ENST00000563332 GPCPD1Q9NPB8 672 aa16.47■□□□□ 0.23
CDIP1-205ENST00000563332 TMEM260Q9NX78 707 aa16.47■□□□□ 0.23
CDIP1-205ENST00000563332 ADAMTSL1Q8N6G6 1762 aa16.47■□□□□ 0.23
CDIP1-205ENST00000563332 SLFN14P0C7P3 912 aa16.46■□□□□ 0.23
CDIP1-205ENST00000563332 TCP10Q12799 353 aa16.46■□□□□ 0.23
CDIP1-205ENST00000563332 NFIAQ12857 509 aa16.46■□□□□ 0.23
CDIP1-205ENST00000563332 E4F1Q66K89 784 aaPredicted RBP16.46■□□□□ 0.23
CDIP1-205ENST00000563332 C15orf52Q6ZUT6 534 aaKnown RBP16.46■□□□□ 0.23
CDIP1-205ENST00000563332 OSBPL5Q9H0X9 879 aaPredicted RBP16.46■□□□□ 0.23
CDIP1-205ENST00000563332 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.46■□□□□ 0.23
CDIP1-205ENST00000563332 V9GYY5 206 aaPredicted RBP16.46■□□□□ 0.23
CDIP1-205ENST00000563332 ROBO3Q96MS0 1386 aa16.46■□□□□ 0.23
CDIP1-205ENST00000563332 PALM3A6NDB9 673 aaPredicted RBP16.46■□□□□ 0.23
CDIP1-205ENST00000563332 G3V3G9 751 aa16.46■□□□□ 0.23
CDIP1-205ENST00000563332 SRGNP10124 158 aa16.46■□□□□ 0.23
CDIP1-205ENST00000563332 NAPAP54920 295 aa16.46■□□□□ 0.23
CDIP1-205ENST00000563332 DCAF8Q5TAQ9 597 aa16.46■□□□□ 0.23
CDIP1-205ENST00000563332 CCAR2Q8N163 923 aaKnown RBP16.46■□□□□ 0.23
CDIP1-205ENST00000563332 RASSF8Q8NHQ8 419 aa16.46■□□□□ 0.23
CDIP1-205ENST00000563332 TMX1Q9H3N1 280 aa16.46■□□□□ 0.23
CDIP1-205ENST00000563332 USP40Q9NVE5 1235 aa16.46■□□□□ 0.23
CDIP1-205ENST00000563332 PODXL2Q9NZ53 605 aa16.46■□□□□ 0.23
CDIP1-205ENST00000563332 ADKP55263 362 aaKnown RBP16.45■□□□□ 0.22
CDIP1-205ENST00000563332 JAKMIP3Q5VZ66 844 aa16.45■□□□□ 0.22
CDIP1-205ENST00000563332 FERMT2Q96AC1 680 aa16.45■□□□□ 0.22
CDIP1-205ENST00000563332 COA7Q96BR5 231 aa16.45■□□□□ 0.22
CDIP1-205ENST00000563332 PRIMPOLQ96LW4 560 aa16.45■□□□□ 0.22
CDIP1-205ENST00000563332 CRAMP1Q96RY5 1269 aa16.45■□□□□ 0.22
CDIP1-205ENST00000563332 BIN2Q9UBW5 565 aaPredicted RBP16.45■□□□□ 0.22
CDIP1-205ENST00000563332 ATP6V0A2Q9Y487 856 aa16.45■□□□□ 0.22
CDIP1-205ENST00000563332 DYNC1I1O14576 645 aa16.45■□□□□ 0.22
CDIP1-205ENST00000563332 PARP1P09874 1014 aaKnown RBP16.45■□□□□ 0.22
CDIP1-205ENST00000563332 CEP135Q66GS9 1140 aa16.45■□□□□ 0.22
CDIP1-205ENST00000563332 KIAA0825Q8IV33 1275 aa16.45■□□□□ 0.22
CDIP1-205ENST00000563332 C4orf32Q8N8J7 132 aa16.45■□□□□ 0.22
CDIP1-205ENST00000563332 EEF2KMTQ96G04 330 aa16.45■□□□□ 0.22
CDIP1-205ENST00000563332 CTNND2Q9UQB3 1225 aa16.45■□□□□ 0.22
CDIP1-205ENST00000563332 MPHOSPH10O00566 681 aaKnown RBP16.44■□□□□ 0.22
CDIP1-205ENST00000563332 TEX33O43247 280 aa16.44■□□□□ 0.22
CDIP1-205ENST00000563332 LETM2Q2VYF4 491 aa16.44■□□□□ 0.22
CDIP1-205ENST00000563332 NT5DC1Q5TFE4 455 aa16.44■□□□□ 0.22
CDIP1-205ENST00000563332 SP8Q8IXZ3 490 aa16.44■□□□□ 0.22
CDIP1-205ENST00000563332 LRRC15Q8TF66 581 aa16.44■□□□□ 0.22
CDIP1-205ENST00000563332 TOP1P11387 765 aaKnown RBP16.44■□□□□ 0.22
CDIP1-205ENST00000563332 NEDD1Q8NHV4 660 aa16.44■□□□□ 0.22
CDIP1-205ENST00000563332 BARHL2Q9NY43 387 aa16.44■□□□□ 0.22
CDIP1-205ENST00000563332 MYH1P12882 1939 aa16.44■□□□□ 0.22
CDIP1-205ENST00000563332 CHRNA5P30532 468 aa16.43■□□□□ 0.22
CDIP1-205ENST00000563332 SLC16A2P36021 539 aa16.43■□□□□ 0.22
CDIP1-205ENST00000563332 GSDMDP57764 484 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms