RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 SLC5A4Q9NY91 659 aa17.5■□□□□ 0.39
SPG7-205ENST00000561945 NRBP1Q9UHY1 535 aa17.5■□□□□ 0.39
SPG7-205ENST00000561945 SLC4A4Q9Y6R1 1079 aa17.5■□□□□ 0.39
SPG7-205ENST00000561945 EEF2P13639 858 aaKnown RBP17.49■□□□□ 0.39
SPG7-205ENST00000561945 C1orf53Q5VUE5 145 aa17.49■□□□□ 0.39
SPG7-205ENST00000561945 SPICE1Q8N0Z3 855 aa17.49■□□□□ 0.39
SPG7-205ENST00000561945 ARRDC4Q8NCT1 418 aa17.49■□□□□ 0.39
SPG7-205ENST00000561945 DDRGK1Q96HY6 314 aa17.49■□□□□ 0.39
SPG7-205ENST00000561945 MAML3Q96JK9 1138 aa17.49■□□□□ 0.39
SPG7-205ENST00000561945 STRBPQ96SI9 672 aaKnown RBP17.49■□□□□ 0.39
SPG7-205ENST00000561945 CNGA1P29973 690 aa17.48■□□□□ 0.39
SPG7-205ENST00000561945 RIOX2Q8IUF8 465 aa17.48■□□□□ 0.39
SPG7-205ENST00000561945 REPS2Q8NFH8 660 aa17.48■□□□□ 0.39
SPG7-205ENST00000561945 ECHDC1Q9NTX5 307 aa17.48■□□□□ 0.39
SPG7-205ENST00000561945 ZNF214Q9UL59 606 aaPredicted RBP17.48■□□□□ 0.39
SPG7-205ENST00000561945 DIS3Q9Y2L1 958 aaKnown RBP17.48■□□□□ 0.39
SPG7-205ENST00000561945 VCANP13611 3396 aa17.48■□□□□ 0.39
SPG7-205ENST00000561945 CDH23Q9H251 3354 aa17.48■□□□□ 0.39
SPG7-205ENST00000561945 VWA5AO00534 786 aa17.47■□□□□ 0.39
SPG7-205ENST00000561945 FCER1AP12319 257 aa17.47■□□□□ 0.39
SPG7-205ENST00000561945 C20orf194Q5TEA3 1177 aa17.47■□□□□ 0.39
SPG7-205ENST00000561945 NCAPG2Q86XI2 1143 aa17.47■□□□□ 0.39
SPG7-205ENST00000561945 KBTBD3Q8NAB2 608 aa17.47■□□□□ 0.39
SPG7-205ENST00000561945 DCTPP1Q9H773 170 aa17.47■□□□□ 0.39
SPG7-205ENST00000561945 PPP1R9AQ9ULJ8 1098 aa17.47■□□□□ 0.39
SPG7-205ENST00000561945 GSG1L2A8MUP6 293 aa17.46■□□□□ 0.39
SPG7-205ENST00000561945 COPB2P35606 906 aa17.46■□□□□ 0.39
SPG7-205ENST00000561945 SLC39A5Q6ZMH5 540 aa17.46■□□□□ 0.39
SPG7-205ENST00000561945 GOPCQ9HD26 462 aa17.46■□□□□ 0.39
SPG7-205ENST00000561945 MTMR10Q9NXD2 777 aa17.46■□□□□ 0.39
SPG7-205ENST00000561945 SMARCA5O60264 1052 aaPredicted RBP17.45■□□□□ 0.38
SPG7-205ENST00000561945 RASA1P20936 1047 aa17.45■□□□□ 0.38
SPG7-205ENST00000561945 RTP1P59025 263 aa17.45■□□□□ 0.38
SPG7-205ENST00000561945 MDM2Q00987 491 aaPredicted RBP17.45■□□□□ 0.38
SPG7-205ENST00000561945 PLS1Q14651 629 aa17.45■□□□□ 0.38
SPG7-205ENST00000561945 ZNF792Q3KQV3 632 aa17.45■□□□□ 0.38
SPG7-205ENST00000561945 GJC2Q5T442 439 aaPredicted RBP17.45■□□□□ 0.38
SPG7-205ENST00000561945 FAM109BQ6ICB4 259 aaPredicted RBP17.45■□□□□ 0.38
SPG7-205ENST00000561945 DEFB123Q8N688 67 aa17.45■□□□□ 0.38
SPG7-205ENST00000561945 APPBP2Q92624 585 aa17.45■□□□□ 0.38
SPG7-205ENST00000561945 FBXO28Q9NVF7 368 aa17.45■□□□□ 0.38
SPG7-205ENST00000561945 NYAP2Q9P242 653 aa17.45■□□□□ 0.38
SPG7-205ENST00000561945 SYNPO2Q9UMS6 1093 aa17.45■□□□□ 0.38
SPG7-205ENST00000561945 MYH4Q9Y623 1939 aa17.45■□□□□ 0.38
SPG7-205ENST00000561945 IGKV6D-41A0A0C4DH26 115 aa17.44■□□□□ 0.38
SPG7-205ENST00000561945 KBTBD13C9JR72 458 aa17.44■□□□□ 0.38
SPG7-205ENST00000561945 ATP2A1O14983 1001 aa17.44■□□□□ 0.38
SPG7-205ENST00000561945 STAT3P40763 770 aa17.44■□□□□ 0.38
SPG7-205ENST00000561945 LRRC41Q15345 812 aa17.44■□□□□ 0.38
SPG7-205ENST00000561945 Q7L0L9 218 aa17.44■□□□□ 0.38
SPG7-205ENST00000561945 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.44■□□□□ 0.38
SPG7-205ENST00000561945 OSBP2Q969R2 916 aa17.44■□□□□ 0.38
SPG7-205ENST00000561945 TINF2Q9BSI4 451 aa17.44■□□□□ 0.38
SPG7-205ENST00000561945 STXBP5LQ9Y2K9 1186 aa17.44■□□□□ 0.38
SPG7-205ENST00000561945 SMCHD1A6NHR9 2005 aa17.43■□□□□ 0.38
SPG7-205ENST00000561945 POTEB2H3BUK9 544 aa17.43■□□□□ 0.38
SPG7-205ENST00000561945 ZFYP08048 801 aaPredicted RBP17.43■□□□□ 0.38
SPG7-205ENST00000561945 ATN1P54259 1190 aaPredicted RBP17.43■□□□□ 0.38
SPG7-205ENST00000561945 PRAMEF19Q5SWL8 479 aa17.43■□□□□ 0.38
SPG7-205ENST00000561945 FAM83BQ5T0W9 1011 aa17.43■□□□□ 0.38
SPG7-205ENST00000561945 MSL3Q8N5Y2 521 aaKnown RBP17.43■□□□□ 0.38
SPG7-205ENST00000561945 MKL1Q969V6 931 aa17.43■□□□□ 0.38
SPG7-205ENST00000561945 MMP19Q99542 508 aa17.43■□□□□ 0.38
SPG7-205ENST00000561945 PHF24Q9UPV7 400 aa17.43■□□□□ 0.38
SPG7-205ENST00000561945 PRUNE2Q8WUY3 3088 aa17.43■□□□□ 0.38
SPG7-205ENST00000561945 PLIN4Q96Q06 1357 aa17.42■□□□□ 0.38
SPG7-205ENST00000561945 RNF113AO15541 343 aaKnown RBP17.42■□□□□ 0.38
SPG7-205ENST00000561945 GNAT2P19087 354 aa17.42■□□□□ 0.38
SPG7-205ENST00000561945 KCTD2Q14681 263 aa17.42■□□□□ 0.38
SPG7-205ENST00000561945 FAM47AQ5JRC9 791 aa17.42■□□□□ 0.38
SPG7-205ENST00000561945 LBHD1Q9BQE6 289 aaPredicted RBP17.42■□□□□ 0.38
SPG7-205ENST00000561945 EPB41L4AQ9HCS5 686 aaPredicted RBP17.42■□□□□ 0.38
SPG7-205ENST00000561945 DNAJC25-GNG10A0A024R161 153 aa17.41■□□□□ 0.38
SPG7-205ENST00000561945 F5H6K3 240 aa17.41■□□□□ 0.38
SPG7-205ENST00000561945 PGK2P07205 417 aa17.41■□□□□ 0.38
SPG7-205ENST00000561945 ZNF865P0CJ78 1059 aaPredicted RBP17.41■□□□□ 0.38
SPG7-205ENST00000561945 KLRC3Q07444 240 aa17.41■□□□□ 0.38
SPG7-205ENST00000561945 MAMDC4Q6UXC1 1216 aa17.41■□□□□ 0.38
SPG7-205ENST00000561945 SLC17A8Q8NDX2 589 aa17.41■□□□□ 0.38
SPG7-205ENST00000561945 SLF1Q9BQI6 1058 aa17.41■□□□□ 0.38
SPG7-205ENST00000561945 TEX13BQ9BXU2 312 aa17.41■□□□□ 0.38
SPG7-205ENST00000561945 BCL11AQ9H165 835 aa17.41■□□□□ 0.38
SPG7-205ENST00000561945 GPAA1O43292 621 aa17.4■□□□□ 0.38
SPG7-205ENST00000561945 NDUFB10O96000 172 aa17.4■□□□□ 0.38
SPG7-205ENST00000561945 ADCYAP1R1P41586 468 aa17.4■□□□□ 0.38
SPG7-205ENST00000561945 ANO1Q5XXA6 986 aa17.4■□□□□ 0.38
SPG7-205ENST00000561945 PRPF38AQ8NAV1 312 aaKnown RBP17.4■□□□□ 0.38
SPG7-205ENST00000561945 GPATCH3Q96I76 525 aa17.4■□□□□ 0.38
SPG7-205ENST00000561945 XPNPEP3Q9NQH7 507 aa17.4■□□□□ 0.38
SPG7-205ENST00000561945 PDLIM7Q9NR12 457 aa17.4■□□□□ 0.38
SPG7-205ENST00000561945 PRKAG2Q9UGJ0 569 aa17.4■□□□□ 0.38
SPG7-205ENST00000561945 ATP11BQ9Y2G3 1177 aa17.4■□□□□ 0.38
SPG7-205ENST00000561945 TTC41PQ6P2S7 1318 aa17.4■□□□□ 0.38
SPG7-205ENST00000561945 SYNGAP1Q96PV0 1343 aa17.4■□□□□ 0.38
SPG7-205ENST00000561945 ADAMTS4O75173 837 aa17.39■□□□□ 0.37
SPG7-205ENST00000561945 RARBP10826 455 aa17.39■□□□□ 0.37
SPG7-205ENST00000561945 AKR1A1P14550 325 aa17.39■□□□□ 0.37
SPG7-205ENST00000561945 TRIM60Q495X7 471 aa17.39■□□□□ 0.37
SPG7-205ENST00000561945 ZNF467Q7Z7K2 595 aaPredicted RBP17.39■□□□□ 0.37
SPG7-205ENST00000561945 GMCL1P1Q8NEA9 526 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms