RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 TSPY8P0CW00 308 aa16.75■□□□□ 0.27
TPM1-223ENST00000560445 ADORA2AP29274 412 aa16.75■□□□□ 0.27
TPM1-223ENST00000560445 SIAH1Q8IUQ4 282 aa16.75■□□□□ 0.27
TPM1-223ENST00000560445 ATG4CQ96DT6 458 aa16.75■□□□□ 0.27
TPM1-223ENST00000560445 SLF1Q9BQI6 1058 aa16.75■□□□□ 0.27
TPM1-223ENST00000560445 PPP1R9AQ9ULJ8 1098 aa16.75■□□□□ 0.27
TPM1-223ENST00000560445 PLIN4Q96Q06 1357 aa16.75■□□□□ 0.27
TPM1-223ENST00000560445 A0A1W2PPC1 479 aa16.74■□□□□ 0.27
TPM1-223ENST00000560445 FDX1P10109 184 aa16.74■□□□□ 0.27
TPM1-223ENST00000560445 MFAP1P55081 439 aaKnown RBP16.74■□□□□ 0.27
TPM1-223ENST00000560445 TRIM32Q13049 653 aa16.74■□□□□ 0.27
TPM1-223ENST00000560445 KCTD2Q14681 263 aa16.74■□□□□ 0.27
TPM1-223ENST00000560445 POTEEQ6S8J3 1075 aa16.74■□□□□ 0.27
TPM1-223ENST00000560445 SAMD1Q6SPF0 538 aaPredicted RBP16.74■□□□□ 0.27
TPM1-223ENST00000560445 CLEC10AQ8IUN9 316 aa16.74■□□□□ 0.27
TPM1-223ENST00000560445 TEX13BQ9BXU2 312 aa16.74■□□□□ 0.27
TPM1-223ENST00000560445 HELLSQ9NRZ9 838 aa16.74■□□□□ 0.27
TPM1-223ENST00000560445 NRBP1Q9UHY1 535 aa16.74■□□□□ 0.27
TPM1-223ENST00000560445 RLFQ13129 1914 aa16.74■□□□□ 0.27
TPM1-223ENST00000560445 PARP14Q460N5 1801 aa16.73■□□□□ 0.27
TPM1-223ENST00000560445 CNGA1P29973 690 aa16.73■□□□□ 0.27
TPM1-223ENST00000560445 STAT3P40763 770 aa16.73■□□□□ 0.27
TPM1-223ENST00000560445 PDE1AP54750 535 aa16.73■□□□□ 0.27
TPM1-223ENST00000560445 PPARAQ07869 468 aa16.73■□□□□ 0.27
TPM1-223ENST00000560445 CCL14Q16627 93 aa16.73■□□□□ 0.27
TPM1-223ENST00000560445 FAM83BQ5T0W9 1011 aa16.73■□□□□ 0.27
TPM1-223ENST00000560445 RIOX2Q8IUF8 465 aa16.73■□□□□ 0.27
TPM1-223ENST00000560445 PRPF38AQ8NAV1 312 aaKnown RBP16.73■□□□□ 0.27
TPM1-223ENST00000560445 GMCL1P1Q8NEA9 526 aa16.73■□□□□ 0.27
TPM1-223ENST00000560445 EPB41L4AQ9HCS5 686 aaPredicted RBP16.73■□□□□ 0.27
TPM1-223ENST00000560445 DDX20Q9UHI6 824 aaKnown RBP16.73■□□□□ 0.27
TPM1-223ENST00000560445 ADAMTS5Q9UNA0 930 aa16.73■□□□□ 0.27
TPM1-223ENST00000560445 SALL3Q9BXA9 1300 aa16.72■□□□□ 0.27
TPM1-223ENST00000560445 F5H6K3 240 aa16.72■□□□□ 0.27
TPM1-223ENST00000560445 VWA5AO00534 786 aa16.72■□□□□ 0.27
TPM1-223ENST00000560445 ZBED4O75132 1171 aa16.72■□□□□ 0.27
TPM1-223ENST00000560445 NT5C2P49902 561 aa16.72■□□□□ 0.27
TPM1-223ENST00000560445 KLRC3Q07444 240 aa16.72■□□□□ 0.27
TPM1-223ENST00000560445 CHRDL2Q6WN34 429 aa16.72■□□□□ 0.27
TPM1-223ENST00000560445 ARRDC4Q8NCT1 418 aa16.72■□□□□ 0.27
TPM1-223ENST00000560445 NEDD1Q8NHV4 660 aa16.72■□□□□ 0.27
TPM1-223ENST00000560445 MKL1Q969V6 931 aa16.72■□□□□ 0.27
TPM1-223ENST00000560445 MMP19Q99542 508 aa16.72■□□□□ 0.27
TPM1-223ENST00000560445 MTMR4Q9NYA4 1195 aa16.72■□□□□ 0.27
TPM1-223ENST00000560445 CLIP2Q9UDT6 1046 aa16.72■□□□□ 0.27
TPM1-223ENST00000560445 FEM1BQ9UK73 627 aa16.72■□□□□ 0.27
TPM1-223ENST00000560445 COLQQ9Y215 455 aaPredicted RBP16.72■□□□□ 0.27
TPM1-223ENST00000560445 DIS3Q9Y2L1 958 aaKnown RBP16.72■□□□□ 0.27
TPM1-223ENST00000560445 MYH4Q9Y623 1939 aa16.72■□□□□ 0.27
TPM1-223ENST00000560445 NDUFB10O96000 172 aa16.71■□□□□ 0.27
TPM1-223ENST00000560445 CCND3P30281 292 aaPredicted RBP16.71■□□□□ 0.27
TPM1-223ENST00000560445 TMEM132BQ14DG7 1078 aa16.71■□□□□ 0.27
TPM1-223ENST00000560445 KIAA1755Q5JYT7 1200 aa16.71■□□□□ 0.27
TPM1-223ENST00000560445 OTUD7AQ8TE49 926 aaPredicted RBP16.71■□□□□ 0.27
TPM1-223ENST00000560445 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.71■□□□□ 0.27
TPM1-223ENST00000560445 FBXO40Q9UH90 709 aa16.71■□□□□ 0.27
TPM1-223ENST00000560445 IGKV6D-41A0A0C4DH26 115 aa16.7■□□□□ 0.26
TPM1-223ENST00000560445 TSPY2A6NKD2 308 aa16.7■□□□□ 0.26
TPM1-223ENST00000560445 PCP11498 1178 aaKnown RBP16.7■□□□□ 0.26
TPM1-223ENST00000560445 OAZ1P54368 228 aa16.7■□□□□ 0.26
TPM1-223ENST00000560445 MCMDC2Q4G0Z9 681 aa16.7■□□□□ 0.26
TPM1-223ENST00000560445 SMC5Q8IY18 1101 aa16.7■□□□□ 0.26
TPM1-223ENST00000560445 STK11IPQ8N1F8 1099 aa16.7■□□□□ 0.26
TPM1-223ENST00000560445 MSL3Q8N5Y2 521 aaKnown RBP16.7■□□□□ 0.26
TPM1-223ENST00000560445 DIS3LQ8TF46 1054 aaKnown RBP16.7■□□□□ 0.26
TPM1-223ENST00000560445 CEP95Q96GE4 821 aa16.7■□□□□ 0.26
TPM1-223ENST00000560445 ZMYM6O95789 1325 aa16.7■□□□□ 0.26
TPM1-223ENST00000560445 TRIOBPQ9H2D6 2365 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 TRIM6-TRIM34B2RNG4 842 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 KBTBD13C9JR72 458 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 HIP1O00291 1037 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 DNM1LO00429 736 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 ATP2A1O14983 1001 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 SEPT4O43236 478 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 PRDM1O75626 825 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 CYBAP13498 195 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 CYP2C19P33261 490 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 TFAP4Q01664 338 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 ALX1Q15699 326 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 LHX8Q68G74 356 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 FAM160B2Q86V87 743 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 NPLOC4Q8TAT6 608 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 CHURC1Q8WUH1 139 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 ANAPC4Q9UJX5 808 aa16.69■□□□□ 0.26
TPM1-223ENST00000560445 ZNF214Q9UL59 606 aaPredicted RBP16.69■□□□□ 0.26
TPM1-223ENST00000560445 ISY1Q9ULR0 285 aaKnown RBP16.69■□□□□ 0.26
TPM1-223ENST00000560445 COL11A1P12107 1806 aaPredicted RBP16.68■□□□□ 0.26
TPM1-223ENST00000560445 FRMPD3Q5JV73 1810 aa16.68■□□□□ 0.26
TPM1-223ENST00000560445 SMIM22K7EJ46 135 aa16.68■□□□□ 0.26
TPM1-223ENST00000560445 BMP3P12645 472 aa16.68■□□□□ 0.26
TPM1-223ENST00000560445 SNRNP48Q6IEG0 339 aaKnown RBP16.68■□□□□ 0.26
TPM1-223ENST00000560445 C7orf61Q8IZ16 206 aa16.68■□□□□ 0.26
TPM1-223ENST00000560445 DDX11Q96FC9 970 aa16.68■□□□□ 0.26
TPM1-223ENST00000560445 GMCL1Q96IK5 515 aa16.68■□□□□ 0.26
TPM1-223ENST00000560445 MAML3Q96JK9 1138 aa16.68■□□□□ 0.26
TPM1-223ENST00000560445 SEC62Q99442 399 aaKnown RBP16.68■□□□□ 0.26
TPM1-223ENST00000560445 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
TPM1-223ENST00000560445 FBXO28Q9NVF7 368 aa16.68■□□□□ 0.26
TPM1-223ENST00000560445 FLRT1Q9NZU1 646 aa16.68■□□□□ 0.26
TPM1-223ENST00000560445 CNPY2Q9Y2B0 182 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms