RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 NPLOC4Q8TAT6 608 aa14.98□□□□□ -0.01
SNX1-209ENST00000559961 SLF1Q9BQI6 1058 aa14.98□□□□□ -0.01
SNX1-209ENST00000559961 SENP6Q9GZR1 1112 aaPredicted RBP14.98□□□□□ -0.01
SNX1-209ENST00000559961 CLIP2Q9UDT6 1046 aa14.98□□□□□ -0.01
SNX1-209ENST00000559961 CDK5RAP2Q96SN8 1893 aa14.97□□□□□ -0.01
SNX1-209ENST00000559961 CHGBP05060 677 aa14.97□□□□□ -0.01
SNX1-209ENST00000559961 RIOX2Q8IUF8 465 aa14.97□□□□□ -0.01
SNX1-209ENST00000559961 IFNL3Q8IZI9 196 aa14.97□□□□□ -0.01
SNX1-209ENST00000559961 PRPF38AQ8NAV1 312 aaKnown RBP14.97□□□□□ -0.01
SNX1-209ENST00000559961 LBHD1Q9BQE6 289 aaPredicted RBP14.97□□□□□ -0.01
SNX1-209ENST00000559961 FLRT1Q9NZU1 646 aa14.97□□□□□ -0.01
SNX1-209ENST00000559961 PPP1R9AQ9ULJ8 1098 aa14.97□□□□□ -0.01
SNX1-209ENST00000559961 NAV1Q8NEY1 1877 aa14.97□□□□□ -0.01
SNX1-209ENST00000559961 MKI67P46013 3256 aaKnown RBP14.97□□□□□ -0.01
SNX1-209ENST00000559961 F5H6K3 240 aa14.96□□□□□ -0.01
SNX1-209ENST00000559961 DNM1LO00429 736 aa14.96□□□□□ -0.01
SNX1-209ENST00000559961 VWA5AO00534 786 aa14.96□□□□□ -0.01
SNX1-209ENST00000559961 TTLL1O95922 423 aa14.96□□□□□ -0.01
SNX1-209ENST00000559961 RASA1P20936 1047 aa14.96□□□□□ -0.01
SNX1-209ENST00000559961 SLC4A3P48751 1232 aa14.96□□□□□ -0.01
SNX1-209ENST00000559961 KLRC3Q07444 240 aa14.96□□□□□ -0.01
SNX1-209ENST00000559961 AAMPQ13685 434 aa14.96□□□□□ -0.01
SNX1-209ENST00000559961 TMEM132BQ14DG7 1078 aa14.96□□□□□ -0.01
SNX1-209ENST00000559961 KIAA1755Q5JYT7 1200 aa14.96□□□□□ -0.01
SNX1-209ENST00000559961 DDX11Q96FC9 970 aa14.96□□□□□ -0.01
SNX1-209ENST00000559961 NRBP1Q9UHY1 535 aa14.96□□□□□ -0.01
SNX1-209ENST00000559961 CNPY2Q9Y2B0 182 aa14.96□□□□□ -0.01
SNX1-209ENST00000559961 PCDHB15Q9Y5E8 787 aa14.96□□□□□ -0.01
SNX1-209ENST00000559961 BRCA2P51587 3418 aa14.95□□□□□ -0.02
SNX1-209ENST00000559961 M0R2C6 588 aa14.95□□□□□ -0.02
SNX1-209ENST00000559961 SEPT4O43236 478 aa14.95□□□□□ -0.02
SNX1-209ENST00000559961 PRDM1O75626 825 aa14.95□□□□□ -0.02
SNX1-209ENST00000559961 SYN1P17600 705 aa14.95□□□□□ -0.02
SNX1-209ENST00000559961 BMP8BP34820 402 aa14.95□□□□□ -0.02
SNX1-209ENST00000559961 IKQ13123 557 aaPredicted RBP14.95□□□□□ -0.02
SNX1-209ENST00000559961 EVI5LQ96CN4 794 aa14.95□□□□□ -0.02
SNX1-209ENST00000559961 TEX13BQ9BXU2 312 aa14.95□□□□□ -0.02
SNX1-209ENST00000559961 UBE2OQ9C0C9 1292 aaKnown RBP14.95□□□□□ -0.02
SNX1-209ENST00000559961 FEM1BQ9UK73 627 aa14.95□□□□□ -0.02
SNX1-209ENST00000559961 SYNPO2Q9UMS6 1093 aa14.95□□□□□ -0.02
SNX1-209ENST00000559961 DIS3Q9Y2L1 958 aaKnown RBP14.95□□□□□ -0.02
SNX1-209ENST00000559961 COBLO75128 1261 aa14.94□□□□□ -0.02
SNX1-209ENST00000559961 FDX1P10109 184 aa14.94□□□□□ -0.02
SNX1-209ENST00000559961 RARBP10826 455 aa14.94□□□□□ -0.02
SNX1-209ENST00000559961 CYBAP13498 195 aa14.94□□□□□ -0.02
SNX1-209ENST00000559961 SNRNP48Q6IEG0 339 aaKnown RBP14.94□□□□□ -0.02
SNX1-209ENST00000559961 KIFC2Q96AC6 838 aa14.94□□□□□ -0.02
SNX1-209ENST00000559961 MAML3Q96JK9 1138 aa14.94□□□□□ -0.02
SNX1-209ENST00000559961 YTHDC1Q96MU7 727 aaKnown RBP14.94□□□□□ -0.02
SNX1-209ENST00000559961 FBXO28Q9NVF7 368 aa14.94□□□□□ -0.02
SNX1-209ENST00000559961 ADAMTS5Q9UNA0 930 aa14.94□□□□□ -0.02
SNX1-209ENST00000559961 SMIM22K7EJ46 135 aa14.93□□□□□ -0.02
SNX1-209ENST00000559961 NDUFB10O96000 172 aa14.93□□□□□ -0.02
SNX1-209ENST00000559961 COL6A1P12109 1028 aa14.93□□□□□ -0.02
SNX1-209ENST00000559961 MNX1P50219 401 aaPredicted RBP14.93□□□□□ -0.02
SNX1-209ENST00000559961 TFAP4Q01664 338 aa14.93□□□□□ -0.02
SNX1-209ENST00000559961 PPARAQ07869 468 aa14.93□□□□□ -0.02
SNX1-209ENST00000559961 ZMYM1Q5SVZ6 1142 aa14.93□□□□□ -0.02
SNX1-209ENST00000559961 CPXCR1Q8N123 301 aa14.93□□□□□ -0.02
SNX1-209ENST00000559961 PI4K2BQ8TCG2 481 aa14.93□□□□□ -0.02
SNX1-209ENST00000559961 CHURC1Q8WUH1 139 aa14.93□□□□□ -0.02
SNX1-209ENST00000559961 RWDD1Q9H446 243 aaPredicted RBP14.93□□□□□ -0.02
SNX1-209ENST00000559961 MTMR4Q9NYA4 1195 aa14.93□□□□□ -0.02
SNX1-209ENST00000559961 FBXO40Q9UH90 709 aa14.93□□□□□ -0.02
SNX1-209ENST00000559961 DOCK3Q8IZD9 2030 aa14.93□□□□□ -0.02
SNX1-209ENST00000559961 PFASO15067 1338 aa14.92□□□□□ -0.02
SNX1-209ENST00000559961 TSPY2A6NKD2 308 aa14.92□□□□□ -0.02
SNX1-209ENST00000559961 MAGEA10P43363 369 aaPredicted RBP14.92□□□□□ -0.02
SNX1-209ENST00000559961 ATN1P54259 1190 aaPredicted RBP14.92□□□□□ -0.02
SNX1-209ENST00000559961 LRRC26Q2I0M4 334 aa14.92□□□□□ -0.02
SNX1-209ENST00000559961 GJC2Q5T442 439 aaPredicted RBP14.92□□□□□ -0.02
SNX1-209ENST00000559961 SLFN13Q68D06 897 aa14.92□□□□□ -0.02
SNX1-209ENST00000559961 RNF180Q86T96 592 aa14.92□□□□□ -0.02
SNX1-209ENST00000559961 ANKRD35Q8N283 1001 aa14.92□□□□□ -0.02
SNX1-209ENST00000559961 MSL3Q8N5Y2 521 aaKnown RBP14.92□□□□□ -0.02
SNX1-209ENST00000559961 NEDD1Q8NHV4 660 aa14.92□□□□□ -0.02
SNX1-209ENST00000559961 MKL1Q969V6 931 aa14.92□□□□□ -0.02
SNX1-209ENST00000559961 CEP95Q96GE4 821 aa14.92□□□□□ -0.02
SNX1-209ENST00000559961 CRBNQ96SW2 442 aa14.92□□□□□ -0.02
SNX1-209ENST00000559961 NUP88Q99567 741 aaPredicted RBP14.92□□□□□ -0.02
SNX1-209ENST00000559961 GDF15Q99988 308 aa14.92□□□□□ -0.02
SNX1-209ENST00000559961 TINF2Q9BSI4 451 aa14.92□□□□□ -0.02
SNX1-209ENST00000559961 TOMM22Q9NS69 142 aa14.92□□□□□ -0.02
SNX1-209ENST00000559961 ROBO3Q96MS0 1386 aa14.92□□□□□ -0.02
SNX1-209ENST00000559961 TRIM6-TRIM34B2RNG4 842 aa14.91□□□□□ -0.02
SNX1-209ENST00000559961 PGK2P07205 417 aa14.91□□□□□ -0.02
SNX1-209ENST00000559961 BMP3P12645 472 aa14.91□□□□□ -0.02
SNX1-209ENST00000559961 MFAP1P55081 439 aaKnown RBP14.91□□□□□ -0.02
SNX1-209ENST00000559961 HDAC1Q13547 482 aaPredicted RBP14.91□□□□□ -0.02
SNX1-209ENST00000559961 FAM47AQ5JRC9 791 aa14.91□□□□□ -0.02
SNX1-209ENST00000559961 PRAMEF19Q5SWL8 479 aa14.91□□□□□ -0.02
SNX1-209ENST00000559961 ANO1Q5XXA6 986 aa14.91□□□□□ -0.02
SNX1-209ENST00000559961 TICAM2Q86XR7 235 aa14.91□□□□□ -0.02
SNX1-209ENST00000559961 TDHQ8IZJ6 230 aa14.91□□□□□ -0.02
SNX1-209ENST00000559961 GMCL1P1Q8NEA9 526 aa14.91□□□□□ -0.02
SNX1-209ENST00000559961 SEC62Q99442 399 aaKnown RBP14.91□□□□□ -0.02
SNX1-209ENST00000559961 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.91□□□□□ -0.02
SNX1-209ENST00000559961 PRO3102Q9H379 93 aa14.91□□□□□ -0.02
SNX1-209ENST00000559961 EPB41L4AQ9HCS5 686 aaPredicted RBP14.91□□□□□ -0.02
SNX1-209ENST00000559961 HELLSQ9NRZ9 838 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms