RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 RNASE9P60153 205 aaKnown RBP13.68□□□□□ -0.22
SEC11A-206ENST00000558924 JADE2Q9NQC1 790 aa13.68□□□□□ -0.22
SEC11A-206ENST00000558924 CEP131Q9UPN4 1083 aa13.68□□□□□ -0.22
SEC11A-206ENST00000558924 PSDA5PKW4 1024 aaPredicted RBP13.68□□□□□ -0.22
SEC11A-206ENST00000558924 MPHOSPH10O00566 681 aaKnown RBP13.68□□□□□ -0.22
SEC11A-206ENST00000558924 SRGAP2O75044 1071 aa13.68□□□□□ -0.22
SEC11A-206ENST00000558924 NTRK3Q16288 839 aa13.68□□□□□ -0.22
SEC11A-206ENST00000558924 SLC35F6Q8N357 371 aa13.68□□□□□ -0.22
SEC11A-206ENST00000558924 TMTC2Q8N394 836 aa13.68□□□□□ -0.22
SEC11A-206ENST00000558924 MACROD2A1Z1Q3 448 aa13.68□□□□□ -0.22
SEC11A-206ENST00000558924 IPO7O95373 1038 aaKnown RBP13.68□□□□□ -0.22
SEC11A-206ENST00000558924 NCAPHQ15003 741 aa13.68□□□□□ -0.22
SEC11A-206ENST00000558924 RPGRQ92834 1020 aaKnown RBP13.68□□□□□ -0.22
SEC11A-206ENST00000558924 LDHBP07195 334 aaKnown RBP13.67□□□□□ -0.22
SEC11A-206ENST00000558924 FGFR2P21802 821 aa13.67□□□□□ -0.22
SEC11A-206ENST00000558924 TOB1P50616 345 aaPredicted RBP13.67□□□□□ -0.22
SEC11A-206ENST00000558924 PTPROQ16827 1216 aa13.67□□□□□ -0.22
SEC11A-206ENST00000558924 TTC38Q5R3I4 469 aa13.67□□□□□ -0.22
SEC11A-206ENST00000558924 VSTM4Q8IW00 320 aa13.67□□□□□ -0.22
SEC11A-206ENST00000558924 RIN2Q8WYP3 895 aaPredicted RBP13.67□□□□□ -0.22
SEC11A-206ENST00000558924 MAN1B1Q9UKM7 699 aa13.67□□□□□ -0.22
SEC11A-206ENST00000558924 PARP3Q9Y6F1 533 aa13.67□□□□□ -0.22
SEC11A-206ENST00000558924 ADAMTSL3P82987 1691 aa13.67□□□□□ -0.22
SEC11A-206ENST00000558924 LIFRP42702 1097 aa13.67□□□□□ -0.22
SEC11A-206ENST00000558924 TRIM65Q6PJ69 517 aa13.67□□□□□ -0.22
SEC11A-206ENST00000558924 ANKRD20A12PQ8NF67 263 aa13.67□□□□□ -0.22
SEC11A-206ENST00000558924 ZHX3Q9H4I2 956 aa13.67□□□□□ -0.22
SEC11A-206ENST00000558924 PP2D1A8MPX8 630 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 EFCAB8A8MWE9 144 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 ERLIN1O75477 346 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 RBM5P52756 815 aaKnown RBP eCLIP13.66□□□□□ -0.22
SEC11A-206ENST00000558924 UBXN6Q9BZV1 441 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 UBA5Q9GZZ9 404 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 TRIM10Q9UDY6 481 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 PLEKHG2Q9H7P9 1386 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 CTAGE15A4D2H0 777 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 CTAGE9A4FU28 777 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 WNT7AO00755 349 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 CTAGE8P0CG41 777 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 LETM2Q2VYF4 491 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 CTAGE6Q86UF2 777 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 CTAGE4Q8IX94 777 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 MICALL1Q8N3F8 863 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 DEF6Q9H4E7 631 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 SCN11AQ9UI33 1791 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 JCADQ9P266 1359 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 ABL1P00519 1130 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 NFIXQ14938 502 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 TRMT1LQ7Z2T5 733 aaKnown RBP13.66□□□□□ -0.22
SEC11A-206ENST00000558924 STAG2Q8N3U4 1231 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 ABCB6Q9NP58 842 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 HDAC6Q9UBN7 1215 aa13.66□□□□□ -0.22
SEC11A-206ENST00000558924 UFL1O94874 794 aa13.65□□□□□ -0.22
SEC11A-206ENST00000558924 IKQ13123 557 aaPredicted RBP13.65□□□□□ -0.22
SEC11A-206ENST00000558924 PTPAQ15257 358 aa13.65□□□□□ -0.22
SEC11A-206ENST00000558924 INF2Q27J81 1249 aa13.65□□□□□ -0.22
SEC11A-206ENST00000558924 CTR9Q6PD62 1173 aa13.65□□□□□ -0.22
SEC11A-206ENST00000558924 BCL9O00512 1426 aa13.65□□□□□ -0.22
SEC11A-206ENST00000558924 ECM2O94769 699 aaPredicted RBP13.65□□□□□ -0.22
SEC11A-206ENST00000558924 UBA7P41226 1012 aa13.65□□□□□ -0.22
SEC11A-206ENST00000558924 MMP14P50281 582 aa13.65□□□□□ -0.22
SEC11A-206ENST00000558924 UBXN1Q04323 297 aa13.65□□□□□ -0.22
SEC11A-206ENST00000558924 FAM196AQ6ZSG2 479 aa13.65□□□□□ -0.22
SEC11A-206ENST00000558924 CLEC10AQ8IUN9 316 aa13.65□□□□□ -0.22
SEC11A-206ENST00000558924 ZSCAN29Q8IWY8 852 aaPredicted RBP13.65□□□□□ -0.22
SEC11A-206ENST00000558924 SMARCC1Q92922 1105 aaPredicted RBP13.65□□□□□ -0.22
SEC11A-206ENST00000558924 EIF3JO75822 258 aaKnown RBP13.65□□□□□ -0.22
SEC11A-206ENST00000558924 KRT9P35527 623 aa13.65□□□□□ -0.22
SEC11A-206ENST00000558924 RESP18Q5W5W9 173 aa13.65□□□□□ -0.22
SEC11A-206ENST00000558924 STAG1Q8WVM7 1258 aa13.65□□□□□ -0.22
SEC11A-206ENST00000558924 DACH1Q9UI36 760 aa13.65□□□□□ -0.22
SEC11A-206ENST00000558924 ZNF804BA4D1E1 1349 aa13.65□□□□□ -0.22
SEC11A-206ENST00000558924 IDEP14735 1019 aa13.64□□□□□ -0.23
SEC11A-206ENST00000558924 TXLNAP40222 546 aa13.64□□□□□ -0.23
SEC11A-206ENST00000558924 CCDC178Q5BJE1 867 aa13.64□□□□□ -0.23
SEC11A-206ENST00000558924 STAT6P42226 847 aa13.64□□□□□ -0.23
SEC11A-206ENST00000558924 MAGEA9P43362 315 aa13.64□□□□□ -0.23
SEC11A-206ENST00000558924 SGMS1Q86VZ5 419 aa13.64□□□□□ -0.23
SEC11A-206ENST00000558924 CNPY4Q8N129 248 aa13.64□□□□□ -0.23
SEC11A-206ENST00000558924 PNMA1Q8ND90 353 aa13.64□□□□□ -0.23
SEC11A-206ENST00000558924 CRACR2AQ9BSW2 395 aa13.64□□□□□ -0.23
SEC11A-206ENST00000558924 LIG3P49916 1009 aa13.64□□□□□ -0.23
SEC11A-206ENST00000558924 SRBD1Q8N5C6 995 aaKnown RBP13.64□□□□□ -0.23
SEC11A-206ENST00000558924 ANKRD13CQ8N6S4 541 aa13.64□□□□□ -0.23
SEC11A-206ENST00000558924 ARFGEF2Q9Y6D5 1785 aa13.64□□□□□ -0.23
SEC11A-206ENST00000558924 PPP6R2O75170 966 aa13.63□□□□□ -0.23
SEC11A-206ENST00000558924 FRMPD2Q68DX3 1309 aaPredicted RBP13.63□□□□□ -0.23
SEC11A-206ENST00000558924 GPR161Q8N6U8 529 aaKnown RBP13.63□□□□□ -0.23
SEC11A-206ENST00000558924 CNBD1Q8NA66 436 aa13.63□□□□□ -0.23
SEC11A-206ENST00000558924 SH3RF3Q8TEJ3 882 aaPredicted RBP13.63□□□□□ -0.23
SEC11A-206ENST00000558924 ABCC12Q96J65 1359 aa13.63□□□□□ -0.23
SEC11A-206ENST00000558924 DCP1AQ9NPI6 582 aaPredicted RBP13.63□□□□□ -0.23
SEC11A-206ENST00000558924 H0YHG0 523 aa13.63□□□□□ -0.23
SEC11A-206ENST00000558924 SLURP2P0DP57 97 aa13.63□□□□□ -0.23
SEC11A-206ENST00000558924 NAPAP54920 295 aa13.63□□□□□ -0.23
SEC11A-206ENST00000558924 UBE4AQ14139 1066 aa13.63□□□□□ -0.23
SEC11A-206ENST00000558924 FBXW10Q5XX13 1052 aa13.63□□□□□ -0.23
SEC11A-206ENST00000558924 EXOC4Q96A65 974 aa13.63□□□□□ -0.23
SEC11A-206ENST00000558924 CXorf56Q9H5V9 222 aa13.63□□□□□ -0.23
SEC11A-206ENST00000558924 GPCPD1Q9NPB8 672 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms