RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 C12orf60Q5U649 245 aa9.49□□□□□ -0.89
SPG11-209ENST00000558253 SPATA20Q8TB22 786 aa9.49□□□□□ -0.89
SPG11-209ENST00000558253 RPGRQ92834 1020 aaKnown RBP9.49□□□□□ -0.89
SPG11-209ENST00000558253 GSDMAQ96QA5 445 aa9.49□□□□□ -0.89
SPG11-209ENST00000558253 ZKSCAN3Q9BRR0 538 aa9.49□□□□□ -0.89
SPG11-209ENST00000558253 KAT14Q9H8E8 782 aa9.49□□□□□ -0.89
SPG11-209ENST00000558253 CABP5Q9NP86 173 aa9.49□□□□□ -0.89
SPG11-209ENST00000558253 ANKIB1Q9P2G1 1089 aa9.49□□□□□ -0.89
SPG11-209ENST00000558253 KCNJ14Q9UNX9 436 aa9.49□□□□□ -0.89
SPG11-209ENST00000558253 V9GY48 417 aaPredicted RBP9.49□□□□□ -0.89
SPG11-209ENST00000558253 KAT6BQ8WYB5 2073 aa9.49□□□□□ -0.89
SPG11-209ENST00000558253 CACNA1SQ13698 1873 aa9.49□□□□□ -0.89
SPG11-209ENST00000558253 MAST2Q6P0Q8 1798 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 GOLGA6L9A6NEM1 432 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 CTIFO43310 598 aaKnown RBP9.48□□□□□ -0.89
SPG11-209ENST00000558253 SERPINC1P01008 464 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 MYL1P05976 194 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 HOXA10P31260 410 aaPredicted RBP9.48□□□□□ -0.89
SPG11-209ENST00000558253 MLLT3P42568 568 aaPredicted RBP9.48□□□□□ -0.89
SPG11-209ENST00000558253 USP5P45974 858 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 PSEN2P49810 448 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 UBASH3AP57075 661 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 DYNLL1P63167 89 aaKnown RBP9.48□□□□□ -0.89
SPG11-209ENST00000558253 EN1Q05925 392 aaPredicted RBP9.48□□□□□ -0.89
SPG11-209ENST00000558253 ORC2Q13416 577 aaPredicted RBP9.48□□□□□ -0.89
SPG11-209ENST00000558253 MORC3Q14149 939 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 PTPN14Q15678 1187 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 CRY2Q49AN0 593 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 METTL16Q86W50 562 aaKnown RBP9.48□□□□□ -0.89
SPG11-209ENST00000558253 SMAP1Q8IYB5 467 aaPredicted RBP9.48□□□□□ -0.89
SPG11-209ENST00000558253 ZNF444Q8N0Y2 327 aaPredicted RBP9.48□□□□□ -0.89
SPG11-209ENST00000558253 IQUBQ8NA54 791 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 CCDC148Q8NFR7 591 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 NKX2-3Q8TAU0 364 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 CCDC12Q8WUD4 166 aaPredicted RBP9.48□□□□□ -0.89
SPG11-209ENST00000558253 TNFRSF25Q93038 417 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 GJD4Q96KN9 370 aaPredicted RBP9.48□□□□□ -0.89
SPG11-209ENST00000558253 CTAGE1Q96RT6 745 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 XPO4Q9C0E2 1151 aaKnown RBP9.48□□□□□ -0.89
SPG11-209ENST00000558253 RMND1Q9NWS8 449 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 IFNKQ9P0W0 207 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 MKRN1Q9UHC7 482 aaKnown RBP9.48□□□□□ -0.89
SPG11-209ENST00000558253 NRBP1Q9UHY1 535 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 PCDHA5Q9Y5H7 936 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 MROH7-TTC4A0A0A0MT08 1334 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 CHD4Q14839 1912 aa9.48□□□□□ -0.89
SPG11-209ENST00000558253 TESPA1A2RU30 521 aaPredicted RBP9.47□□□□□ -0.89
SPG11-209ENST00000558253 POLR2DO15514 142 aaKnown RBP9.47□□□□□ -0.89
SPG11-209ENST00000558253 TNNT1P13805 278 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 IL1R1P14778 569 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 LONP1P36776 959 aaKnown RBP9.47□□□□□ -0.89
SPG11-209ENST00000558253 TXLNAP40222 546 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 PLCD1P51178 756 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 NLRP5P59047 1200 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 ATP2C1P98194 919 aaPredicted RBP9.47□□□□□ -0.89
SPG11-209ENST00000558253 GRM4Q14833 912 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 CCDC144BQ3MJ40 725 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 TTC38Q5R3I4 469 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 C6orf132Q5T0Z8 1188 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 CEP135Q66GS9 1140 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 FILIP1Q7Z7B0 1213 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 CCAR2Q8N163 923 aaKnown RBP9.47□□□□□ -0.89
SPG11-209ENST00000558253 DAGLBQ8NCG7 672 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 ZNF384Q8TF68 577 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 CLIC6Q96NY7 704 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 CRAMP1Q96RY5 1269 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 KCNK17Q96T54 332 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 MKNK2Q9HBH9 465 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 MCM9Q9NXL9 1143 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 TFCP2L1Q9NZI6 479 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 SRP68Q9UHB9 627 aaKnown RBP9.47□□□□□ -0.89
SPG11-209ENST00000558253 TRPC5Q9UL62 973 aaPredicted RBP9.47□□□□□ -0.89
SPG11-209ENST00000558253 PCDHB6Q9Y5E3 794 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 CNTNAP5Q8WYK1 1306 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 A0A1B0GUL6 1792 aa9.47□□□□□ -0.89
SPG11-209ENST00000558253 KIAA1551Q9HCM1 1747 aa9.46□□□□□ -0.89
SPG11-209ENST00000558253 GPR75-ASB3A0A0A6YYF3 556 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 hCG_1984214I3L0E3 225 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 BIN1O00499 593 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 ACTN4O43707 911 aaKnown RBP9.46□□□□□ -0.9
SPG11-209ENST00000558253 CCZ1BP86790 482 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 CCZ1P86791 482 aaPredicted RBP9.46□□□□□ -0.9
SPG11-209ENST00000558253 TFAP4Q01664 338 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 LRMPQ12912 555 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 NR5A1Q13285 461 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 PNOCQ13519 176 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 NFIXQ14938 502 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 DMRTA1Q5VZB9 504 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 NYAP1Q6ZVC0 841 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 SH3RF1Q7Z6J0 888 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 PDCL2Q8N4E4 241 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 MPNDQ8N594 471 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 ZNF713Q8N859 430 aaPredicted RBP9.46□□□□□ -0.9
SPG11-209ENST00000558253 KIF18AQ8NI77 898 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 SLC4A5Q9BY07 1137 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 CSRNP2Q9H175 543 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 CUEDC2Q9H467 287 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 MAGEF1Q9HAY2 307 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 GGA1Q9UJY5 639 aa9.46□□□□□ -0.9
SPG11-209ENST00000558253 MAN1B1Q9UKM7 699 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms