RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 NACAP1Q9BZK3 213 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 RNF208Q9H0X6 261 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 OSBPL3Q9H4L5 887 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 SH2D4AQ9H788 454 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 MKNK2Q9HBH9 465 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 HELLSQ9NRZ9 838 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 HOXC10Q9NYD6 342 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 COL11A1P12107 1806 aaPredicted RBP10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 A0A0D9SFI3 127 aa10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 WDR46O15213 610 aaKnown RBP10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 PRDM1O75626 825 aa10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 CYP2B6P20813 491 aa10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 IRX5P78411 483 aaPredicted RBP10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 ATP2B2Q01814 1243 aa10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 ALX1Q15699 326 aa10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 MORN1Q5T089 497 aa10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 VPS53Q5VIR6 699 aa10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 GPR142Q7Z601 462 aa10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 PLEKHH3Q7Z736 793 aa10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 ZNF444Q8N0Y2 327 aaPredicted RBP10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 NUDT12Q9BQG2 462 aa10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 TANGO6Q9C0B7 1094 aa10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 NAPBQ9H115 298 aa10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 NYAP2Q9P242 653 aa10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 A0A0G2JMZ2 1700 aa10.47□□□□□ -0.73
SNRPA1-206ENST00000558059 TRIM6-TRIM34B2RNG4 842 aa10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 HMGCRP04035 888 aa10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 XRCC5P13010 732 aaKnown RBP10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 GJA8P48165 433 aa10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 CCNA1P78396 465 aa10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 PPARAQ07869 468 aa10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 TRIM32Q13049 653 aa10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 NMIQ13287 307 aaPredicted RBP10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 MCMDC2Q4G0Z9 681 aa10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 CCAR1Q8IX12 1150 aaKnown RBP10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 SOCS4Q8WXH5 440 aa10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 TRIB2Q92519 343 aa10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 ZNF287Q9HBT7 754 aa10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 PAK6Q9NQU5 681 aaPredicted RBP10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 FBXO28Q9NVF7 368 aa10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 ADAMTS5Q9UNA0 930 aa10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 TACC3Q9Y6A5 838 aa10.46□□□□□ -0.73
SNRPA1-206ENST00000558059 F5H6K3 240 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 FLOT1O75955 427 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 SGPL1O95470 568 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 PTPREP23469 700 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 PDE4AP27815 886 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 CTDSPL2Q05D32 466 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 PDE4BQ07343 736 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 KLRC3Q07444 240 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 UBE2Q1Q7Z7E8 422 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 ZNF589Q86UQ0 364 aaPredicted RBP10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 NEDD1Q8NHV4 660 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 NKX2-3Q8TAU0 364 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 U2AF1L4Q8WU68 220 aaKnown RBP10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 MKL1Q969V6 931 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 RILPL2Q969X0 211 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 ATG4CQ96DT6 458 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 CEP95Q96GE4 821 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 MOV10L1Q9BXT6 1211 aaKnown RBP10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 SPATC1LQ9H0A9 340 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 GOPCQ9HD26 462 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 INCENPQ9NQS7 918 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 MTMR4Q9NYA4 1195 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 CLIP2Q9UDT6 1046 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 ANAPC4Q9UJX5 808 aa10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.45□□□□□ -0.74
SNRPA1-206ENST00000558059 PLIN4Q96Q06 1357 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 SLC15A5A6NIM6 579 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 NDUFB10O96000 172 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 FGAP02671 866 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 SLC3A2P08195 630 aaKnown RBP10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 FGRP09769 529 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 HSPD1P10809 573 aaKnown RBP10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 SDSP20132 328 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 RGS2P41220 211 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 TFAP4Q01664 338 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 MAP2K5Q13163 448 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 GRB14Q14449 540 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 CCL14Q16627 93 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 FAM47AQ5JRC9 791 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 FAM83BQ5T0W9 1011 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 MAP3K21Q5TCX8 1036 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 WDR78Q5VTH9 848 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 PRPF38BQ5VTL8 546 aaKnown RBP10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 MB21D1Q8N884 522 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 DEFB118Q96PH6 123 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 NUP88Q99567 741 aaPredicted RBP10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 CRISPLD2Q9H0B8 497 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 PPP1R9AQ9ULJ8 1098 aa10.44□□□□□ -0.74
SNRPA1-206ENST00000558059 SMCHD1A6NHR9 2005 aa10.43□□□□□ -0.74
SNRPA1-206ENST00000558059 CCDC171Q6TFL3 1326 aa10.43□□□□□ -0.74
SNRPA1-206ENST00000558059 RPTORQ8N122 1335 aa10.43□□□□□ -0.74
SNRPA1-206ENST00000558059 ST18O60284 1047 aa10.43□□□□□ -0.74
SNRPA1-206ENST00000558059 HOXC6P09630 235 aa10.43□□□□□ -0.74
SNRPA1-206ENST00000558059 TSPY3P0CV98 308 aa10.43□□□□□ -0.74
SNRPA1-206ENST00000558059 TSPY8P0CW00 308 aa10.43□□□□□ -0.74
SNRPA1-206ENST00000558059 ERCC3P19447 782 aa10.43□□□□□ -0.74
SNRPA1-206ENST00000558059 TMEM132BQ14DG7 1078 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms