RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 GOLGA8AA7E2F4 631 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 TULP2O00295 520 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 SEMA3EO15041 775 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 GYS2P54840 703 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 DBN1Q16643 649 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 ZNF394Q53GI3 561 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 KRT40Q6A162 431 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 ADALQ6DHV7 355 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 MAMSTRQ6ZN01 415 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 BRAPQ7Z569 592 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 LCA5Q86VQ0 697 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 SEPT12Q8IYM1 358 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 CACTIN-AS1Q8N1I8 211 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 PDCL2Q8N4E4 241 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 TDRD7Q8NHU6 1098 aaKnown RBP5.77□□□□□ -1.49
TMEM260-210ENST00000556422 ALG1Q9BT22 464 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 NACAP1Q9BZK3 213 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 UTP6Q9NYH9 597 aaKnown RBP5.77□□□□□ -1.49
TMEM260-210ENST00000556422 TMOD4Q9NZQ9 345 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 NRBP1Q9UHY1 535 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 hCG_2014768A0A024R1R8 64 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 YEATS4O95619 227 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 IFNAR1P17181 557 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 U2AF2P26368 475 aaKnown RBP eCLIP5.76□□□□□ -1.493e-6■■■■□ 23.8
TMEM260-210ENST00000556422 RRP12Q5JTH9 1297 aaKnown RBP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 C10orf67Q8IYJ2 551 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 SMCR8Q8TEV9 937 aaPredicted RBP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 BRIP1Q9BX63 1249 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 CBX8Q9HC52 389 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 ETAA1Q9NY74 926 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 SLC12A7Q9Y666 1083 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 TNKSO95271 1327 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 A0A087WWV3 80 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 CCDC194A0A1B0GVG4 234 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 FMNL1O95466 1100 aaPredicted RBP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 HIBADHP31937 336 aaKnown RBP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 NOP2P46087 812 aaKnown RBP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 ME1P48163 572 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 NDUFA8P51970 172 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 PTPAQ15257 358 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 PRR5LQ6MZQ0 368 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 SASS6Q6UVJ0 657 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 CMTR1Q8N1G2 835 aaKnown RBP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 CHCHD4Q8N4Q1 142 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 ENAHQ8N8S7 591 aaPredicted RBP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 MAP3K14Q99558 947 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 JAG2Q9Y219 1238 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 A0A1B0GVL5 298 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 A0A1W2PQ27 194 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 A0A1W2PQ64 194 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 A0A1W2PQD8 194 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 CARNS1A5YM72 827 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 MINDY4BA8MYZ0 360 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 CBFA2T2O43439 604 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 GYS1P13807 737 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 RFC4P35249 363 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 CDC37Q16543 378 aaPredicted RBP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 CRY2Q49AN0 593 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 TRAPPC3LQ5T215 181 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 C11orf57Q6ZUT1 292 aaPredicted RBP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 FMNL3Q8IVF7 1028 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 SREK1Q8WXA9 508 aaKnown RBP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 UPF1Q92900 1129 aaKnown RBP eCLIP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 LZTS2Q9BRK4 669 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 DNAJC25Q9H1X3 360 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 AATFQ9NY61 560 aaKnown RBP eCLIP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 CCDC39Q9UFE4 941 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 COL11A2P13942 1736 aaPredicted RBP5.76□□□□□ -1.49
TMEM260-210ENST00000556422 MYH1P12882 1939 aa5.76□□□□□ -1.49
TMEM260-210ENST00000556422 CDKL5O76039 1030 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 IARSP41252 1262 aaKnown RBP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 FUT2Q10981 343 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 TRAF1Q13077 416 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 WTAPQ15007 396 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 IQCB1Q15051 598 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 GRIK5Q16478 980 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 ANO1Q5XXA6 986 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 ZNF654Q8IZM8 581 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 FSIP1Q8NA03 581 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 MRFAP1L1Q96HT8 127 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 ANKRD2Q9GZV1 360 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 QTRT2Q9H974 415 aaKnown RBP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 DCP1AQ9NPI6 582 aaPredicted RBP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 UBAP1Q9NZ09 502 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 MKRN1Q9UHC7 482 aaKnown RBP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 CCDC69A6NI79 296 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 SPTLC2O15270 562 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 PRDM1O75626 825 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 RRM1P23921 792 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 RCAN1P53805 252 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 IRX1P78414 480 aaPredicted RBP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 GRAPQ13588 217 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 E2F4Q16254 413 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 ARMC9Q7Z3E5 817 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 GRAPLQ8TC17 118 aaPredicted RBP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 KCNG4Q8TDN1 519 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 MRPS27Q92552 414 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms