RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 RPAP3Q9H6T3 665 aaPredicted RBP13.07□□□□□ -0.32
TDP1-212ENST00000555565 PAG1Q9NWQ8 432 aa13.07□□□□□ -0.32
TDP1-212ENST00000555565 NAV1Q8NEY1 1877 aa13.07□□□□□ -0.32
TDP1-212ENST00000555565 BDP1A6H8Y1 2624 aa13.07□□□□□ -0.32
TDP1-212ENST00000555565 A0A1W2PRG0 241 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 MYCNP04198 464 aaPredicted RBP13.06□□□□□ -0.32
TDP1-212ENST00000555565 POLR3DP05423 398 aaPredicted RBP13.06□□□□□ -0.32
TDP1-212ENST00000555565 ERCC3P19447 782 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 PBX2P40425 430 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 FPGSQ05932 587 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 GABPAQ06546 454 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 ADGRE1Q14246 886 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 COG2Q14746 738 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 RAB3GAP1Q15042 981 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 ABCB5Q2M3G0 1257 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 SLFNL1Q499Z3 407 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 CERKLQ49MI3 558 aaPredicted RBP13.06□□□□□ -0.32
TDP1-212ENST00000555565 AKNAD1Q5T1N1 836 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 RASIP1Q5U651 963 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 LCORLQ8N3X6 602 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 ADAMTS19Q8TE59 1207 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 SDR42E1Q8WUS8 393 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 TIFAQ96CG3 184 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 MAML3Q96JK9 1138 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 SPATC1LQ9H0A9 340 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 MCM9Q9NXL9 1143 aa13.06□□□□□ -0.32
TDP1-212ENST00000555565 NCOR1O75376 2440 aa13.05□□□□□ -0.32
TDP1-212ENST00000555565 GRXCR1A8MXD5 290 aa13.05□□□□□ -0.32
TDP1-212ENST00000555565 RAG1P15918 1043 aa13.05□□□□□ -0.32
TDP1-212ENST00000555565 ADD2P35612 726 aa13.05□□□□□ -0.32
TDP1-212ENST00000555565 KIAA1755Q5JYT7 1200 aa13.05□□□□□ -0.32
TDP1-212ENST00000555565 ANKRD33Q7Z3H0 272 aa13.05□□□□□ -0.32
TDP1-212ENST00000555565 FAM122AQ96E09 287 aa13.05□□□□□ -0.32
TDP1-212ENST00000555565 FEZ1Q99689 392 aa13.05□□□□□ -0.32
TDP1-212ENST00000555565 HAUS7Q99871 368 aa13.05□□□□□ -0.32
TDP1-212ENST00000555565 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.05□□□□□ -0.322e-6■■□□□ 12.6
TDP1-212ENST00000555565 PBX4Q9BYU1 374 aa13.05□□□□□ -0.32
TDP1-212ENST00000555565 LRRCC1Q9C099 1032 aa13.05□□□□□ -0.32
TDP1-212ENST00000555565 ARMT1Q9H993 441 aa13.05□□□□□ -0.32
TDP1-212ENST00000555565 DCP1AQ9NPI6 582 aaPredicted RBP13.05□□□□□ -0.32
TDP1-212ENST00000555565 HOXC10Q9NYD6 342 aa13.05□□□□□ -0.32
TDP1-212ENST00000555565 MYH7P12883 1935 aa13.04□□□□□ -0.32
TDP1-212ENST00000555565 BAZ2AQ9UIF9 1905 aaKnown RBP13.04□□□□□ -0.32
TDP1-212ENST00000555565 A0A1W2PQ45 241 aaPredicted RBP13.04□□□□□ -0.32
TDP1-212ENST00000555565 A0A1W2PQY0 241 aa13.04□□□□□ -0.32
TDP1-212ENST00000555565 PRKAB2O43741 272 aa13.04□□□□□ -0.32
TDP1-212ENST00000555565 SMARCA5O60264 1052 aaPredicted RBP13.04□□□□□ -0.32
TDP1-212ENST00000555565 PQBP1O60828 265 aaKnown RBP13.04□□□□□ -0.32
TDP1-212ENST00000555565 PGK1P00558 417 aa13.04□□□□□ -0.32
TDP1-212ENST00000555565 CHGBP05060 677 aa13.04□□□□□ -0.32
TDP1-212ENST00000555565 CYP2D6P10635 497 aa13.04□□□□□ -0.32
TDP1-212ENST00000555565 TAL1P17542 331 aaPredicted RBP13.04□□□□□ -0.32
TDP1-212ENST00000555565 ABRAQ8N0Z2 381 aa13.04□□□□□ -0.32
TDP1-212ENST00000555565 PPM1EQ8WY54 764 aa13.04□□□□□ -0.32
TDP1-212ENST00000555565 TOX2Q96NM4 488 aa13.04□□□□□ -0.32
TDP1-212ENST00000555565 PRDM12Q9H4Q4 367 aa13.04□□□□□ -0.32
TDP1-212ENST00000555565 CABP5Q9NP86 173 aa13.04□□□□□ -0.32
TDP1-212ENST00000555565 XPNPEP3Q9NQH7 507 aa13.04□□□□□ -0.32
TDP1-212ENST00000555565 TMEM39AQ9NV64 488 aa13.04□□□□□ -0.32
TDP1-212ENST00000555565 SMCHD1A6NHR9 2005 aa13.04□□□□□ -0.32
TDP1-212ENST00000555565 REV3LO60673 3130 aa13.04□□□□□ -0.32
TDP1-212ENST00000555565 ADAMTS4O75173 837 aa13.03□□□□□ -0.32
TDP1-212ENST00000555565 MBD4O95243 580 aa13.03□□□□□ -0.32
TDP1-212ENST00000555565 TIMP1P01033 207 aa13.03□□□□□ -0.32
TDP1-212ENST00000555565 ZNF865P0CJ78 1059 aaPredicted RBP13.03□□□□□ -0.32
TDP1-212ENST00000555565 MRPS5P82675 430 aaKnown RBP13.03□□□□□ -0.32
TDP1-212ENST00000555565 SEPT2Q15019 361 aa13.03□□□□□ -0.32
TDP1-212ENST00000555565 SIAH1Q8IUQ4 282 aa13.03□□□□□ -0.32
TDP1-212ENST00000555565 UHRF1Q96T88 793 aaPredicted RBP13.03□□□□□ -0.32
TDP1-212ENST00000555565 MROH8Q9H579 483 aa13.03□□□□□ -0.32
TDP1-212ENST00000555565 THEGQ9P2T0 379 aa13.03□□□□□ -0.32
TDP1-212ENST00000555565 NRBP1Q9UHY1 535 aa13.03□□□□□ -0.32
TDP1-212ENST00000555565 TBX21Q9UL17 535 aa13.03□□□□□ -0.32
TDP1-212ENST00000555565 CHD7Q9P2D1 2997 aa13.03□□□□□ -0.32
TDP1-212ENST00000555565 A0A0G2JMZ2 1700 aa13.02□□□□□ -0.32
TDP1-212ENST00000555565 BMP1P13497 986 aa13.02□□□□□ -0.33
TDP1-212ENST00000555565 DSG3P32926 999 aa13.02□□□□□ -0.33
TDP1-212ENST00000555565 TMEM240Q5SV17 173 aa13.02□□□□□ -0.33
TDP1-212ENST00000555565 CCSAPQ6IQ19 270 aaPredicted RBP13.02□□□□□ -0.33
TDP1-212ENST00000555565 SLC44A5Q8NCS7 719 aa13.02□□□□□ -0.33
TDP1-212ENST00000555565 DYNLL2Q96FJ2 89 aa13.02□□□□□ -0.33
TDP1-212ENST00000555565 NECAB3Q96P71 396 aaPredicted RBP13.02□□□□□ -0.33
TDP1-212ENST00000555565 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.02□□□□□ -0.33
TDP1-212ENST00000555565 DCTPP1Q9H773 170 aa13.02□□□□□ -0.33
TDP1-212ENST00000555565 ATP8A2Q9NTI2 1148 aa13.02□□□□□ -0.33
TDP1-212ENST00000555565 MYH8P13535 1937 aa13.01□□□□□ -0.33
TDP1-212ENST00000555565 SMIM22K7EJ46 135 aa13.01□□□□□ -0.33
TDP1-212ENST00000555565 MPHOSPH10O00566 681 aaKnown RBP13.01□□□□□ -0.33
TDP1-212ENST00000555565 RARBP10826 455 aa13.01□□□□□ -0.33
TDP1-212ENST00000555565 CDK7P50613 346 aa13.01□□□□□ -0.33
TDP1-212ENST00000555565 UBE3CQ15386 1083 aa13.01□□□□□ -0.33
TDP1-212ENST00000555565 CCDC85BQ15834 202 aaPredicted RBP13.01□□□□□ -0.33
TDP1-212ENST00000555565 MFSD5Q6N075 450 aa13.01□□□□□ -0.33
TDP1-212ENST00000555565 RNF180Q86T96 592 aa13.01□□□□□ -0.33
TDP1-212ENST00000555565 KLHDC9Q8NEP7 349 aa13.01□□□□□ -0.33
TDP1-212ENST00000555565 LENG1Q96BZ8 264 aaPredicted RBP13.01□□□□□ -0.33
TDP1-212ENST00000555565 GAS2L1Q99501 681 aaPredicted RBP13.01□□□□□ -0.33
TDP1-212ENST00000555565 TSEN34Q9BSV6 310 aaKnown RBP13.01□□□□□ -0.33
TDP1-212ENST00000555565 SWAP70Q9UH65 585 aa13.01□□□□□ -0.33
TDP1-212ENST00000555565 ADAMTS5Q9UNA0 930 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms