RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 PLS1Q14651 629 aa18.83■□□□□ 0.6
ARHGEF40-205ENST00000555052 SBK1Q52WX2 424 aa18.83■□□□□ 0.6
ARHGEF40-205ENST00000555052 KBTBD3Q8NAB2 608 aa18.83■□□□□ 0.6
ARHGEF40-205ENST00000555052 SENP6Q9GZR1 1112 aaPredicted RBP18.83■□□□□ 0.6
ARHGEF40-205ENST00000555052 DCTPP1Q9H773 170 aa18.83■□□□□ 0.6
ARHGEF40-205ENST00000555052 FBXO28Q9NVF7 368 aa18.83■□□□□ 0.6
ARHGEF40-205ENST00000555052 PRUNE2Q8WUY3 3088 aa18.83■□□□□ 0.6
ARHGEF40-205ENST00000555052 SMCHD1A6NHR9 2005 aa18.83■□□□□ 0.6
ARHGEF40-205ENST00000555052 ROBO3Q96MS0 1386 aa18.82■□□□□ 0.6
ARHGEF40-205ENST00000555052 GSG1L2A8MUP6 293 aa18.82■□□□□ 0.6
ARHGEF40-205ENST00000555052 GIMAP6Q6P9H5 292 aa18.82■□□□□ 0.6
ARHGEF40-205ENST00000555052 NCAPG2Q86XI2 1143 aa18.82■□□□□ 0.6
ARHGEF40-205ENST00000555052 OSBP2Q969R2 916 aa18.82■□□□□ 0.6
ARHGEF40-205ENST00000555052 UBE2OQ9C0C9 1292 aaKnown RBP18.82■□□□□ 0.6
ARHGEF40-205ENST00000555052 SLC5A4Q9NY91 659 aa18.82■□□□□ 0.6
ARHGEF40-205ENST00000555052 CDH23Q9H251 3354 aa18.81■□□□□ 0.6
ARHGEF40-205ENST00000555052 SEPT4O43236 478 aa18.81■□□□□ 0.6
ARHGEF40-205ENST00000555052 SLC25A27O95847 323 aa18.81■□□□□ 0.6
ARHGEF40-205ENST00000555052 RASA1P20936 1047 aa18.81■□□□□ 0.6
ARHGEF40-205ENST00000555052 TSHZ3Q63HK5 1081 aa18.81■□□□□ 0.6
ARHGEF40-205ENST00000555052 REPS2Q8NFH8 660 aa18.81■□□□□ 0.6
ARHGEF40-205ENST00000555052 MAML3Q96JK9 1138 aa18.81■□□□□ 0.6
ARHGEF40-205ENST00000555052 GOPCQ9HD26 462 aa18.81■□□□□ 0.6
ARHGEF40-205ENST00000555052 PPP1R9AQ9ULJ8 1098 aa18.81■□□□□ 0.6
ARHGEF40-205ENST00000555052 VWA5AO00534 786 aa18.8■□□□□ 0.6
ARHGEF40-205ENST00000555052 FCER1AP12319 257 aa18.8■□□□□ 0.6
ARHGEF40-205ENST00000555052 RIOX2Q8IUF8 465 aa18.8■□□□□ 0.6
ARHGEF40-205ENST00000555052 APPBP2Q92624 585 aa18.8■□□□□ 0.6
ARHGEF40-205ENST00000555052 EPB41L4AQ9HCS5 686 aaPredicted RBP18.8■□□□□ 0.6
ARHGEF40-205ENST00000555052 ZNF214Q9UL59 606 aaPredicted RBP18.8■□□□□ 0.6
ARHGEF40-205ENST00000555052 ATN1P54259 1190 aaPredicted RBP18.79■□□□□ 0.6
ARHGEF40-205ENST00000555052 MDM2Q00987 491 aaPredicted RBP18.79■□□□□ 0.6
ARHGEF40-205ENST00000555052 FAM83BQ5T0W9 1011 aa18.79■□□□□ 0.6
ARHGEF40-205ENST00000555052 GJC2Q5T442 439 aaPredicted RBP18.79■□□□□ 0.6
ARHGEF40-205ENST00000555052 SAMD1Q6SPF0 538 aaPredicted RBP18.79■□□□□ 0.6
ARHGEF40-205ENST00000555052 ARRDC4Q8NCT1 418 aa18.79■□□□□ 0.6
ARHGEF40-205ENST00000555052 GPATCH3Q96I76 525 aa18.79■□□□□ 0.6
ARHGEF40-205ENST00000555052 PLXNA1Q9UIW2 1896 aa18.79■□□□□ 0.6
ARHGEF40-205ENST00000555052 RNF113AO15541 343 aaKnown RBP18.78■□□□□ 0.6
ARHGEF40-205ENST00000555052 STAT3P40763 770 aa18.78■□□□□ 0.6
ARHGEF40-205ENST00000555052 RTP1P59025 263 aa18.78■□□□□ 0.6
ARHGEF40-205ENST00000555052 PRAMEF19Q5SWL8 479 aa18.78■□□□□ 0.6
ARHGEF40-205ENST00000555052 ANO1Q5XXA6 986 aa18.78■□□□□ 0.6
ARHGEF40-205ENST00000555052 NYAP2Q9P242 653 aa18.78■□□□□ 0.6
ARHGEF40-205ENST00000555052 NRBP1Q9UHY1 535 aa18.78■□□□□ 0.6
ARHGEF40-205ENST00000555052 VCANP13611 3396 aa18.78■□□□□ 0.6
ARHGEF40-205ENST00000555052 LTBP2Q14767 1821 aa18.78■□□□□ 0.6
ARHGEF40-205ENST00000555052 IGKV6D-41A0A0C4DH26 115 aa18.77■□□□□ 0.6
ARHGEF40-205ENST00000555052 GPAA1O43292 621 aa18.77■□□□□ 0.6
ARHGEF40-205ENST00000555052 ZFYP08048 801 aaPredicted RBP18.77■□□□□ 0.6
ARHGEF40-205ENST00000555052 SNX17Q15036 470 aa18.77■□□□□ 0.6
ARHGEF40-205ENST00000555052 ZNF792Q3KQV3 632 aa18.77■□□□□ 0.6
ARHGEF40-205ENST00000555052 MMP19Q99542 508 aa18.77■□□□□ 0.6
ARHGEF40-205ENST00000555052 DIS3Q9Y2L1 958 aaKnown RBP18.77■□□□□ 0.6
ARHGEF40-205ENST00000555052 MYH4Q9Y623 1939 aa18.76■□□□□ 0.59
ARHGEF40-205ENST00000555052 KBTBD13C9JR72 458 aa18.76■□□□□ 0.59
ARHGEF40-205ENST00000555052 M0R2C6 588 aa18.76■□□□□ 0.59
ARHGEF40-205ENST00000555052 NDUFB10O96000 172 aa18.76■□□□□ 0.59
ARHGEF40-205ENST00000555052 PGK2P07205 417 aa18.76■□□□□ 0.59
ARHGEF40-205ENST00000555052 COPB2P35606 906 aa18.76■□□□□ 0.59
ARHGEF40-205ENST00000555052 LRRC41Q15345 812 aa18.76■□□□□ 0.59
ARHGEF40-205ENST00000555052 FAM47AQ5JRC9 791 aa18.76■□□□□ 0.59
ARHGEF40-205ENST00000555052 DEFB123Q8N688 67 aa18.76■□□□□ 0.59
ARHGEF40-205ENST00000555052 NUP88Q99567 741 aaPredicted RBP18.76■□□□□ 0.59
ARHGEF40-205ENST00000555052 MKNK2Q9HBH9 465 aa18.76■□□□□ 0.59
ARHGEF40-205ENST00000555052 MINDY4BA8MYZ0 360 aa18.75■□□□□ 0.59
ARHGEF40-205ENST00000555052 F5H6K3 240 aa18.75■□□□□ 0.59
ARHGEF40-205ENST00000555052 GNAT2P19087 354 aa18.75■□□□□ 0.59
ARHGEF40-205ENST00000555052 KLRC3Q07444 240 aa18.75■□□□□ 0.59
ARHGEF40-205ENST00000555052 KCTD2Q14681 263 aa18.75■□□□□ 0.59
ARHGEF40-205ENST00000555052 SLC39A5Q6ZMH5 540 aa18.75■□□□□ 0.59
ARHGEF40-205ENST00000555052 Q7L0L9 218 aa18.75■□□□□ 0.59
ARHGEF40-205ENST00000555052 SLF1Q9BQI6 1058 aa18.75■□□□□ 0.59
ARHGEF40-205ENST00000555052 TINF2Q9BSI4 451 aa18.75■□□□□ 0.59
ARHGEF40-205ENST00000555052 PLIN4Q96Q06 1357 aa18.74■□□□□ 0.59
ARHGEF40-205ENST00000555052 RAD21O60216 631 aa18.74■□□□□ 0.59
ARHGEF40-205ENST00000555052 C1orf53Q5VUE5 145 aa18.74■□□□□ 0.59
ARHGEF40-205ENST00000555052 STK11IPQ8N1F8 1099 aa18.74■□□□□ 0.59
ARHGEF40-205ENST00000555052 PI4K2BQ8TCG2 481 aa18.74■□□□□ 0.59
ARHGEF40-205ENST00000555052 LBHD1Q9BQE6 289 aaPredicted RBP18.74■□□□□ 0.59
ARHGEF40-205ENST00000555052 TEX13BQ9BXU2 312 aa18.74■□□□□ 0.59
ARHGEF40-205ENST00000555052 ATP11BQ9Y2G3 1177 aa18.74■□□□□ 0.59
ARHGEF40-205ENST00000555052 PCDHB15Q9Y5E8 787 aa18.74■□□□□ 0.59
ARHGEF40-205ENST00000555052 TTC41PQ6P2S7 1318 aa18.74■□□□□ 0.59
ARHGEF40-205ENST00000555052 TTC28Q96AY4 2481 aa18.73■□□□□ 0.59
ARHGEF40-205ENST00000555052 ATP2A1O14983 1001 aa18.73■□□□□ 0.59
ARHGEF40-205ENST00000555052 ZNF865P0CJ78 1059 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF40-205ENST00000555052 TAL1P17542 331 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF40-205ENST00000555052 ADCYAP1R1P41586 468 aa18.73■□□□□ 0.59
ARHGEF40-205ENST00000555052 TDO2P48775 406 aa18.73■□□□□ 0.59
ARHGEF40-205ENST00000555052 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.73■□□□□ 0.59
ARHGEF40-205ENST00000555052 MKL1Q969V6 931 aa18.73■□□□□ 0.59
ARHGEF40-205ENST00000555052 MTMR10Q9NXD2 777 aa18.73■□□□□ 0.59
ARHGEF40-205ENST00000555052 SYNPO2Q9UMS6 1093 aa18.73■□□□□ 0.59
ARHGEF40-205ENST00000555052 CHD9Q3L8U1 2897 aa18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 PATL2C9JE40 543 aaKnown RBP18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 PRDM1O75626 825 aa18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 RARBP10826 455 aa18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 TRIM60Q495X7 471 aa18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 SNRNP48Q6IEG0 339 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms