RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 ADAMTS5Q9UNA0 930 aa14.92□□□□□ -0.02
SIX1-202ENST00000553535 ZNF236Q9UL36 1845 aa14.91□□□□□ -0.02
SIX1-202ENST00000553535 GSG1L2A8MUP6 293 aa14.91□□□□□ -0.02
SIX1-202ENST00000553535 WDR46O15213 610 aaKnown RBP14.91□□□□□ -0.02
SIX1-202ENST00000553535 COBLO75128 1261 aa14.91□□□□□ -0.02
SIX1-202ENST00000553535 MKRN4PQ13434 485 aaPredicted RBP14.91□□□□□ -0.02
SIX1-202ENST00000553535 SBK1Q52WX2 424 aa14.91□□□□□ -0.02
SIX1-202ENST00000553535 OLFML2BQ68BL8 750 aa14.91□□□□□ -0.02
SIX1-202ENST00000553535 OSBP2Q969R2 916 aa14.91□□□□□ -0.02
SIX1-202ENST00000553535 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.91□□□□□ -0.02
SIX1-202ENST00000553535 MROH8Q9H579 483 aa14.91□□□□□ -0.02
SIX1-202ENST00000553535 SOX1O00570 391 aaPredicted RBP14.9□□□□□ -0.02
SIX1-202ENST00000553535 MSCO60682 206 aa14.9□□□□□ -0.02
SIX1-202ENST00000553535 CYBAP13498 195 aa14.9□□□□□ -0.02
SIX1-202ENST00000553535 SYN1P17600 705 aa14.9□□□□□ -0.02
SIX1-202ENST00000553535 LRRC26Q2I0M4 334 aa14.9□□□□□ -0.02
SIX1-202ENST00000553535 GIMAP6Q6P9H5 292 aa14.9□□□□□ -0.02
SIX1-202ENST00000553535 ABRAQ8N0Z2 381 aa14.9□□□□□ -0.02
SIX1-202ENST00000553535 ARPP21Q9UBL0 812 aaPredicted RBP14.9□□□□□ -0.02
SIX1-202ENST00000553535 COL11A1P12107 1806 aaPredicted RBP14.9□□□□□ -0.02
SIX1-202ENST00000553535 SMCHD1A6NHR9 2005 aa14.9□□□□□ -0.02
SIX1-202ENST00000553535 CNGA1P29973 690 aa14.9□□□□□ -0.02
SIX1-202ENST00000553535 PLS1Q14651 629 aa14.9□□□□□ -0.02
SIX1-202ENST00000553535 TMEM132BQ14DG7 1078 aa14.9□□□□□ -0.02
SIX1-202ENST00000553535 NCAPG2Q86XI2 1143 aa14.9□□□□□ -0.02
SIX1-202ENST00000553535 APPBP2Q92624 585 aa14.9□□□□□ -0.02
SIX1-202ENST00000553535 GREB1LQ9C091 1923 aaPredicted RBP14.9□□□□□ -0.02
SIX1-202ENST00000553535 RNF113AO15541 343 aaKnown RBP14.89□□□□□ -0.03
SIX1-202ENST00000553535 RASA1P20936 1047 aa14.89□□□□□ -0.03
SIX1-202ENST00000553535 MAGEA10P43363 369 aaPredicted RBP14.89□□□□□ -0.03
SIX1-202ENST00000553535 TSHZ3Q63HK5 1081 aa14.89□□□□□ -0.03
SIX1-202ENST00000553535 GPATCH3Q96I76 525 aa14.89□□□□□ -0.03
SIX1-202ENST00000553535 FBXO28Q9NVF7 368 aa14.89□□□□□ -0.03
SIX1-202ENST00000553535 SLC25A27O95847 323 aa14.88□□□□□ -0.03
SIX1-202ENST00000553535 ZFYP08048 801 aaPredicted RBP14.88□□□□□ -0.03
SIX1-202ENST00000553535 CD44P16070 742 aaKnown RBP14.88□□□□□ -0.03
SIX1-202ENST00000553535 LRCH3Q96II8 777 aa14.88□□□□□ -0.03
SIX1-202ENST00000553535 SENP6Q9GZR1 1112 aaPredicted RBP14.88□□□□□ -0.03
SIX1-202ENST00000553535 GOPCQ9HD26 462 aa14.88□□□□□ -0.03
SIX1-202ENST00000553535 PLSCR2Q9NRY7 297 aa14.88□□□□□ -0.03
SIX1-202ENST00000553535 SLC5A4Q9NY91 659 aa14.88□□□□□ -0.03
SIX1-202ENST00000553535 PCDHB15Q9Y5E8 787 aa14.88□□□□□ -0.03
SIX1-202ENST00000553535 DNM1LO00429 736 aa14.87□□□□□ -0.03
SIX1-202ENST00000553535 VWA5AO00534 786 aa14.87□□□□□ -0.03
SIX1-202ENST00000553535 FCER1AP12319 257 aa14.87□□□□□ -0.03
SIX1-202ENST00000553535 RIOX2Q8IUF8 465 aa14.87□□□□□ -0.03
SIX1-202ENST00000553535 REPS2Q8NFH8 660 aa14.87□□□□□ -0.03
SIX1-202ENST00000553535 EPB41L4AQ9HCS5 686 aaPredicted RBP14.87□□□□□ -0.03
SIX1-202ENST00000553535 NYAP2Q9P242 653 aa14.87□□□□□ -0.03
SIX1-202ENST00000553535 PPP1R9AQ9ULJ8 1098 aa14.87□□□□□ -0.03
SIX1-202ENST00000553535 MINDY4BA8MYZ0 360 aa14.86□□□□□ -0.03
SIX1-202ENST00000553535 SEPT4O43236 478 aa14.86□□□□□ -0.03
SIX1-202ENST00000553535 GPAA1O43292 621 aa14.86□□□□□ -0.03
SIX1-202ENST00000553535 STAT3P40763 770 aa14.86□□□□□ -0.03
SIX1-202ENST00000553535 PRAMEF19Q5SWL8 479 aa14.86□□□□□ -0.03
SIX1-202ENST00000553535 FAM83BQ5T0W9 1011 aa14.86□□□□□ -0.03
SIX1-202ENST00000553535 MAML3Q96JK9 1138 aa14.86□□□□□ -0.03
SIX1-202ENST00000553535 ROBO3Q96MS0 1386 aa14.86□□□□□ -0.03
SIX1-202ENST00000553535 MKNK2Q9HBH9 465 aa14.86□□□□□ -0.03
SIX1-202ENST00000553535 ZNF214Q9UL59 606 aaPredicted RBP14.86□□□□□ -0.03
SIX1-202ENST00000553535 COL6A3P12111 3177 aa14.86□□□□□ -0.03
SIX1-202ENST00000553535 TTC41PQ6P2S7 1318 aa14.86□□□□□ -0.03
SIX1-202ENST00000553535 M0R2C6 588 aa14.85□□□□□ -0.03
SIX1-202ENST00000553535 GNAT2P19087 354 aa14.85□□□□□ -0.03
SIX1-202ENST00000553535 LRIT3Q3SXY7 679 aa14.85□□□□□ -0.03
SIX1-202ENST00000553535 STK11IPQ8N1F8 1099 aa14.85□□□□□ -0.03
SIX1-202ENST00000553535 ARRDC4Q8NCT1 418 aa14.85□□□□□ -0.03
SIX1-202ENST00000553535 MYH4Q9Y623 1939 aa14.85□□□□□ -0.03
SIX1-202ENST00000553535 IGKV6D-41A0A0C4DH26 115 aa14.85□□□□□ -0.03
SIX1-202ENST00000553535 PATL2C9JE40 543 aaKnown RBP14.85□□□□□ -0.03
SIX1-202ENST00000553535 F5H6K3 240 aa14.85□□□□□ -0.03
SIX1-202ENST00000553535 KLRC3Q07444 240 aa14.85□□□□□ -0.03
SIX1-202ENST00000553535 GJC2Q5T442 439 aaPredicted RBP14.85□□□□□ -0.03
SIX1-202ENST00000553535 ANO1Q5XXA6 986 aa14.85□□□□□ -0.03
SIX1-202ENST00000553535 TDHQ8IZJ6 230 aa14.85□□□□□ -0.03
SIX1-202ENST00000553535 PI4K2BQ8TCG2 481 aa14.85□□□□□ -0.03
SIX1-202ENST00000553535 MMP19Q99542 508 aa14.85□□□□□ -0.03
SIX1-202ENST00000553535 UBE2OQ9C0C9 1292 aaKnown RBP14.85□□□□□ -0.03
SIX1-202ENST00000553535 PLXNA1Q9UIW2 1896 aa14.85□□□□□ -0.03
SIX1-202ENST00000553535 LAMA2P24043 3122 aaKnown RBP14.84□□□□□ -0.03
SIX1-202ENST00000553535 RAD21O60216 631 aa14.84□□□□□ -0.03
SIX1-202ENST00000553535 ATN1P54259 1190 aaPredicted RBP14.84□□□□□ -0.03
SIX1-202ENST00000553535 ZNF792Q3KQV3 632 aa14.84□□□□□ -0.03
SIX1-202ENST00000553535 GPR153Q6NV75 609 aa14.84□□□□□ -0.03
SIX1-202ENST00000553535 IFNL3Q8IZI9 196 aa14.84□□□□□ -0.03
SIX1-202ENST00000553535 ZNF444Q8N0Y2 327 aaPredicted RBP14.84□□□□□ -0.03
SIX1-202ENST00000553535 OTUD7AQ8TE49 926 aaPredicted RBP14.84□□□□□ -0.03
SIX1-202ENST00000553535 MKL1Q969V6 931 aa14.84□□□□□ -0.03
SIX1-202ENST00000553535 SEC62Q99442 399 aaKnown RBP14.84□□□□□ -0.03
SIX1-202ENST00000553535 NUP88Q99567 741 aaPredicted RBP14.84□□□□□ -0.03
SIX1-202ENST00000553535 CLIP2Q9UDT6 1046 aa14.84□□□□□ -0.03
SIX1-202ENST00000553535 DIS3Q9Y2L1 958 aaKnown RBP14.84□□□□□ -0.03
SIX1-202ENST00000553535 ERC2O15083 957 aa14.83□□□□□ -0.04
SIX1-202ENST00000553535 NDUFB10O96000 172 aa14.83□□□□□ -0.04
SIX1-202ENST00000553535 APPP05067 770 aa14.83□□□□□ -0.04
SIX1-202ENST00000553535 PGK2P07205 417 aa14.83□□□□□ -0.04
SIX1-202ENST00000553535 COPB2P35606 906 aa14.83□□□□□ -0.04
SIX1-202ENST00000553535 TDO2P48775 406 aa14.83□□□□□ -0.04
SIX1-202ENST00000553535 LRRFIP1Q32MZ4 808 aaKnown RBP14.83□□□□□ -0.04
SIX1-202ENST00000553535 SLF1Q9BQI6 1058 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms