RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.98■■■□□ 2.07
TDP1-205ENST00000553527 TTLL1O95922 423 aa27.97■■■□□ 2.07
TDP1-205ENST00000553527 PXYLP1Q8TE99 480 aa27.97■■■□□ 2.07
TDP1-205ENST00000553527 RBBP6Q7Z6E9 1792 aaKnown RBP27.96■■■□□ 2.07
TDP1-205ENST00000553527 INHAP05111 366 aa27.96■■■□□ 2.07
TDP1-205ENST00000553527 CCL5P13501 91 aa27.96■■■□□ 2.07
TDP1-205ENST00000553527 RNF208Q9H0X6 261 aa27.96■■■□□ 2.07
TDP1-205ENST00000553527 NMT2O60551 498 aa27.95■■■□□ 2.06
TDP1-205ENST00000553527 NDUFB10O96000 172 aa27.95■■■□□ 2.06
TDP1-205ENST00000553527 TNRC18O15417 2968 aaPredicted RBP27.94■■■□□ 2.06
TDP1-205ENST00000553527 MKL1Q969V6 931 aa27.94■■■□□ 2.06
TDP1-205ENST00000553527 MOV10L1Q9BXT6 1211 aaKnown RBP27.94■■■□□ 2.06
TDP1-205ENST00000553527 UNC93B1Q9H1C4 597 aa27.94■■■□□ 2.06
TDP1-205ENST00000553527 ISY1Q9ULR0 285 aaKnown RBP27.94■■■□□ 2.06
TDP1-205ENST00000553527 STX8Q9UNK0 236 aa27.94■■■□□ 2.06
TDP1-205ENST00000553527 SOCS4Q8WXH5 440 aa27.93■■■□□ 2.06
TDP1-205ENST00000553527 SPATC1LQ9H0A9 340 aa27.93■■■□□ 2.06
TDP1-205ENST00000553527 IL17RBQ9NRM6 502 aa27.93■■■□□ 2.06
TDP1-205ENST00000553527 IVNS1ABPQ9Y6Y0 642 aa27.93■■■□□ 2.06
TDP1-205ENST00000553527 PLIN4Q96Q06 1357 aa27.92■■■□□ 2.06
TDP1-205ENST00000553527 ZNF213O14771 459 aa27.92■■■□□ 2.06
TDP1-205ENST00000553527 MB21D1Q8N884 522 aa27.92■■■□□ 2.06
TDP1-205ENST00000553527 ZMYM6O95789 1325 aa27.92■■■□□ 2.06
TDP1-205ENST00000553527 ORC4O43929 436 aa27.91■■■□□ 2.06
TDP1-205ENST00000553527 MORN1Q5T089 497 aa27.91■■■□□ 2.06
TDP1-205ENST00000553527 SLFN13Q68D06 897 aa27.91■■■□□ 2.06
TDP1-205ENST00000553527 MFSD6Q6ZSS7 791 aa27.91■■■□□ 2.06
TDP1-205ENST00000553527 NCAPG2Q86XI2 1143 aa27.91■■■□□ 2.06
TDP1-205ENST00000553527 IL25Q9H293 177 aa27.91■■■□□ 2.06
TDP1-205ENST00000553527 PPP1R9AQ9ULJ8 1098 aa27.91■■■□□ 2.06
TDP1-205ENST00000553527 MTMR7Q9Y216 660 aa27.91■■■□□ 2.06
TDP1-205ENST00000553527 A0A0G2JMZ2 1700 aa27.9■■■□□ 2.06
TDP1-205ENST00000553527 ERCC3P19447 782 aa27.9■■■□□ 2.06
TDP1-205ENST00000553527 PTPREP23469 700 aa27.9■■■□□ 2.06
TDP1-205ENST00000553527 RGS2P41220 211 aa27.9■■■□□ 2.06
TDP1-205ENST00000553527 TRIM32Q13049 653 aa27.9■■■□□ 2.06
TDP1-205ENST00000553527 TMEM132BQ14DG7 1078 aa27.9■■■□□ 2.06
TDP1-205ENST00000553527 AKNAD1Q5T1N1 836 aa27.9■■■□□ 2.06
TDP1-205ENST00000553527 TRIB2Q92519 343 aa27.9■■■□□ 2.06
TDP1-205ENST00000553527 ZNFX1Q9P2E3 1918 aaKnown RBP27.9■■■□□ 2.06
TDP1-205ENST00000553527 HMGCRP04035 888 aa27.89■■■□□ 2.06
TDP1-205ENST00000553527 FGRP09769 529 aa27.89■■■□□ 2.06
TDP1-205ENST00000553527 TBC1D10CQ8IV04 446 aa27.89■■■□□ 2.06
TDP1-205ENST00000553527 SLF1Q9BQI6 1058 aa27.89■■■□□ 2.06
TDP1-205ENST00000553527 NBPF3Q9H094 633 aa27.89■■■□□ 2.06
TDP1-205ENST00000553527 MKI67P46013 3256 aaKnown RBP27.89■■■□□ 2.05
TDP1-205ENST00000553527 VWA5AO00534 786 aa27.88■■■□□ 2.05
TDP1-205ENST00000553527 SLC4A3P48751 1232 aa27.88■■■□□ 2.05
TDP1-205ENST00000553527 MAP2K5Q13163 448 aa27.88■■■□□ 2.05
TDP1-205ENST00000553527 CCL14Q16627 93 aa27.88■■■□□ 2.05
TDP1-205ENST00000553527 GMCL1P1Q8NEA9 526 aa27.88■■■□□ 2.05
TDP1-205ENST00000553527 USP6NLQ92738 828 aa27.88■■■□□ 2.05
TDP1-205ENST00000553527 KIFC2Q96AC6 838 aa27.88■■■□□ 2.05
TDP1-205ENST00000553527 DSCC1Q9BVC3 393 aa27.88■■■□□ 2.05
TDP1-205ENST00000553527 ADAMTS5Q9UNA0 930 aa27.88■■■□□ 2.05
TDP1-205ENST00000553527 SLC15A5A6NIM6 579 aa27.87■■■□□ 2.05
TDP1-205ENST00000553527 GJB1P08034 283 aa27.87■■■□□ 2.05
TDP1-205ENST00000553527 XRCC5P13010 732 aaKnown RBP27.87■■■□□ 2.05
TDP1-205ENST00000553527 MCCP23508 829 aa27.87■■■□□ 2.05
TDP1-205ENST00000553527 CHMLP26374 656 aa27.87■■■□□ 2.05
TDP1-205ENST00000553527 PPP4R3BQ5MIZ7 849 aa27.87■■■□□ 2.05
TDP1-205ENST00000553527 STAG1Q8WVM7 1258 aa27.87■■■□□ 2.05
TDP1-205ENST00000553527 RUFY2Q8WXA3 655 aa27.87■■■□□ 2.05
TDP1-205ENST00000553527 BMP3P12645 472 aa27.86■■■□□ 2.05
TDP1-205ENST00000553527 ZKSCAN1P17029 563 aaPredicted RBP27.86■■■□□ 2.05
TDP1-205ENST00000553527 PRPF38AQ8NAV1 312 aaKnown RBP27.86■■■□□ 2.05
TDP1-205ENST00000553527 DEFB118Q96PH6 123 aa27.86■■■□□ 2.05
TDP1-205ENST00000553527 RNF41Q9H4P4 317 aaPredicted RBP27.86■■■□□ 2.05
TDP1-205ENST00000553527 SYNPO2Q9UMS6 1093 aa27.86■■■□□ 2.05
TDP1-205ENST00000553527 CTDP1Q9Y5B0 961 aaPredicted RBP27.86■■■□□ 2.05
TDP1-205ENST00000553527 LAMA4Q16363 1823 aa27.85■■■□□ 2.05
TDP1-205ENST00000553527 STAT3P40763 770 aa27.85■■■□□ 2.05
TDP1-205ENST00000553527 IKQ13123 557 aaPredicted RBP27.85■■■□□ 2.05
TDP1-205ENST00000553527 IMMTQ16891 758 aaKnown RBP27.85■■■□□ 2.05
TDP1-205ENST00000553527 DPP9Q86TI2 863 aa27.85■■■□□ 2.05
TDP1-205ENST00000553527 SHCBP1Q8NEM2 672 aa27.85■■■□□ 2.05
TDP1-205ENST00000553527 NKX2-3Q8TAU0 364 aa27.85■■■□□ 2.05
TDP1-205ENST00000553527 APBA2Q99767 749 aa27.85■■■□□ 2.05
TDP1-205ENST00000553527 MROH8Q9H579 483 aa27.85■■■□□ 2.05
TDP1-205ENST00000553527 CTNNA3Q9UI47 895 aa27.85■■■□□ 2.05
TDP1-205ENST00000553527 FEM1BQ9UK73 627 aa27.85■■■□□ 2.05
TDP1-205ENST00000553527 SLC1A4P43007 532 aa27.84■■■□□ 2.05
TDP1-205ENST00000553527 GJA8P48165 433 aa27.84■■■□□ 2.05
TDP1-205ENST00000553527 GRB14Q14449 540 aa27.84■■■□□ 2.05
TDP1-205ENST00000553527 CPXCR1Q8N123 301 aa27.84■■■□□ 2.05
TDP1-205ENST00000553527 U2AF1L4Q8WU68 220 aaKnown RBP27.84■■■□□ 2.05
TDP1-205ENST00000553527 ZKSCAN3Q9BRR0 538 aa27.84■■■□□ 2.05
TDP1-205ENST00000553527 HMX1Q9NP08 348 aaPredicted RBP27.84■■■□□ 2.05
TDP1-205ENST00000553527 NEDD4P46934 1319 aa27.84■■■□□ 2.05
TDP1-205ENST00000553527 TMEM232C9JQI7 657 aa27.83■■■□□ 2.05
TDP1-205ENST00000553527 STRNO43815 780 aa27.83■■■□□ 2.05
TDP1-205ENST00000553527 ZBED4O75132 1171 aa27.83■■■□□ 2.05
TDP1-205ENST00000553527 TFRCP02786 760 aaKnown RBP27.83■■■□□ 2.05
TDP1-205ENST00000553527 PCP11498 1178 aaKnown RBP27.83■■■□□ 2.05
TDP1-205ENST00000553527 ADORA2AP29274 412 aa27.83■■■□□ 2.05
TDP1-205ENST00000553527 KCTD1Q719H9 257 aa27.83■■■□□ 2.05
TDP1-205ENST00000553527 TRMT44Q8IYL2 757 aaKnown RBP27.83■■■□□ 2.05
TDP1-205ENST00000553527 NPLOC4Q8TAT6 608 aa27.83■■■□□ 2.05
TDP1-205ENST00000553527 ESR2Q92731 530 aa27.83■■■□□ 2.05
TDP1-205ENST00000553527 SHISA4Q96DD7 197 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms