RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 KIF22Q14807 665 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 TSGA10IPQ3SY00 556 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 CATSPERGQ6ZRH7 1159 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 Q6ZUG5 572 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 KCTD1Q719H9 257 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 TMTC2Q8N394 836 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 NKX2-3Q8TAU0 364 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 NUP133Q8WUM0 1156 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 DCAF4Q8WV16 495 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 KIFC2Q96AC6 838 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 TCEANC2Q96MN5 208 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 PAGR1Q9BTK6 254 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 C22orf23Q9BZE7 217 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 ASCC2Q9H1I8 757 aaPredicted RBP7.39□□□□□ -1.23
LTBR-212ENST00000543542 GPCPD1Q9NPB8 672 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 CPA4Q9UI42 421 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 SYNPO2Q9UMS6 1093 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 SLC45A1Q9Y2W3 748 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 WDR19Q8NEZ3 1342 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 SH2B2O14492 632 aaPredicted RBP7.38□□□□□ -1.23
LTBR-212ENST00000543542 FOXN1O15353 648 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 TLR2O60603 784 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 ZBED4O75132 1171 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 PARP1P09874 1014 aaKnown RBP7.38□□□□□ -1.23
LTBR-212ENST00000543542 GOLGA8HP0CJ92 632 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 RPS6KB1P23443 525 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 HOXA7P31268 230 aaPredicted RBP7.38□□□□□ -1.23
LTBR-212ENST00000543542 GCLCP48506 637 aaPredicted RBP7.38□□□□□ -1.23
LTBR-212ENST00000543542 CTCFP49711 727 aaPredicted RBP7.38□□□□□ -1.23
LTBR-212ENST00000543542 STAT2P52630 851 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 ANTXR2P58335 489 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 ANAPC15P60006 121 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 HERVK_113P62684 666 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 SEC23AQ15436 765 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 KIAA1755Q5JYT7 1200 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 WDR78Q5VTH9 848 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 RCSD1Q6JBY9 416 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 RUFY3Q7L099 469 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 FAM160B2Q86V87 743 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 ANKRD13CQ8N6S4 541 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 CTCFLQ8NI51 663 aaPredicted RBP7.38□□□□□ -1.23
LTBR-212ENST00000543542 GTF3C2Q8WUA4 911 aaPredicted RBP7.38□□□□□ -1.23
LTBR-212ENST00000543542 CHURC1Q8WUH1 139 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 KCNB2Q92953 911 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 GMCL1Q96IK5 515 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 P2RX7Q99572 595 aaKnown RBP7.38□□□□□ -1.23
LTBR-212ENST00000543542 SLF1Q9BQI6 1058 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 MTA3Q9BTC8 594 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 UPF3BQ9BZI7 483 aaKnown RBP7.38□□□□□ -1.23
LTBR-212ENST00000543542 PDRG1Q9NUG6 133 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 HOXC10Q9NYD6 342 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 FEM1BQ9UK73 627 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 SLC12A7Q9Y666 1083 aa7.38□□□□□ -1.23
LTBR-212ENST00000543542 KLF18A0A0U1RQI7 1052 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 GPR25O00155 361 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 FKTNO75072 461 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 CALM1P0DP23 149 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 CALM2P0DP24 149 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 CALM3P0DP25 149 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 PDHBP11177 359 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 DSG3P32926 999 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 KIF5BP33176 963 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 LIFRP42702 1097 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 NOVP48745 357 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 LBX1P52954 281 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 CCNA1P78396 465 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 EXOSC10Q01780 885 aaKnown RBP7.37□□□□□ -1.23
LTBR-212ENST00000543542 SP3Q02447 781 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 ARHGEF6Q15052 776 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 GPATCH4Q5T3I0 446 aaKnown RBP7.37□□□□□ -1.23
LTBR-212ENST00000543542 RASGRP2Q7LDG7 609 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 RAB11FIP4Q86YS3 637 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 CCDC144CPQ8IYA2 1237 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 ZNF654Q8IZM8 581 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 PRPF38AQ8NAV1 312 aaKnown RBP7.37□□□□□ -1.23
LTBR-212ENST00000543542 IGDCC4Q8TDY8 1250 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 ANKS1AQ92625 1134 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 BRF1Q92994 677 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 ATG4CQ96DT6 458 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 MYL10Q9BUA6 226 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 BACH2Q9BYV9 841 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 TM6SF1Q9BZW5 370 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 LY9Q9HBG7 655 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 SENP2Q9HC62 589 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 GPHNQ9NQX3 736 aaPredicted RBP7.37□□□□□ -1.23
LTBR-212ENST00000543542 FBXO28Q9NVF7 368 aa7.37□□□□□ -1.23
LTBR-212ENST00000543542 SPDYE16A6NNV3 312 aaPredicted RBP7.36□□□□□ -1.23
LTBR-212ENST00000543542 GOLGA8AA7E2F4 631 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 GOLGA8BA8MQT2 603 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 ZBTB43O43298 467 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 DDAH1O94760 285 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 FMNL1O95466 1100 aaPredicted RBP7.36□□□□□ -1.23
LTBR-212ENST00000543542 HSPA8P11142 646 aaKnown RBP7.36□□□□□ -1.23
LTBR-212ENST00000543542 RXRAP19793 462 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 SLC16A2P36021 539 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 NEK4P51957 841 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 ZNF543Q08ER8 600 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 APOBRQ0VD83 1088 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 ASPRV1Q53RT3 343 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 SYDE2Q5VT97 1194 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms